Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000183-TA|BGIBMGA000183-PA|IPR010300|Cysteine
dioxygenase type I
(81 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A1ZBA8 Cluster: CG5493-PA; n=7; Coelomata|Rep: CG5493-P... 72 3e-12
UniRef50_UPI00015B5281 Cluster: PREDICTED: similar to cysteine d... 60 6e-09
UniRef50_Q4RPS4 Cluster: Chromosome 12 SCAF15007, whole genome s... 60 6e-09
UniRef50_UPI0000D56995 Cluster: PREDICTED: similar to CG5493-PA;... 57 8e-08
UniRef50_Q16878 Cluster: Cysteine dioxygenase type 1; n=23; Eume... 55 2e-07
UniRef50_Q16857 Cluster: Cysteine dioxygenase; n=4; Deuterostomi... 52 2e-06
UniRef50_Q20893 Cluster: Cysteine dioxygenase; n=2; Caenorhabdit... 44 4e-04
UniRef50_Q9U8F1 Cluster: Cysteine dioxygenase; n=1; Schistosoma ... 38 0.051
UniRef50_Q2TUE7 Cluster: NADH-ubiquinone oxidoreductase; n=5; st... 37 0.067
UniRef50_A6SFW0 Cluster: Putative uncharacterized protein; n=2; ... 34 0.63
UniRef50_A1D473 Cluster: Cysteine dioxygenase; n=6; Eurotiomycet... 34 0.63
UniRef50_A6ENU6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.1
UniRef50_A3U961 Cluster: Putative uncharacterized protein; n=1; ... 33 1.1
UniRef50_A0LKZ5 Cluster: Mammalian cell entry related domain pro... 33 1.1
UniRef50_O75489 Cluster: NADH dehydrogenase [ubiquinone] iron-su... 33 1.4
UniRef50_UPI00004985BE Cluster: cortexillin II; n=2; Entamoeba h... 32 2.5
UniRef50_Q637Z5 Cluster: Group-specific protein; n=10; Bacillus ... 32 2.5
UniRef50_Q6P613 Cluster: NADH dehydrogenase (Ubiquinone) Fe-S pr... 31 3.3
UniRef50_Q5B5U9 Cluster: Putative uncharacterized protein; n=1; ... 31 3.3
UniRef50_UPI000049A328 Cluster: hypothetical protein 326.t00008;... 31 4.4
UniRef50_A6TUX8 Cluster: Putative uncharacterized protein; n=1; ... 31 5.8
UniRef50_A5V1W8 Cluster: Translation elongation factor G; n=4; C... 31 5.8
UniRef50_A2QA26 Cluster: Remark: The A. terreus cds is included ... 31 5.8
UniRef50_Q5RLY7 Cluster: Cysteine dioxygenase; n=3; Ascomycota|R... 31 5.8
UniRef50_A4SVX0 Cluster: Putative uncharacterized protein; n=1; ... 30 7.7
UniRef50_A4GJE4 Cluster: Predicted choline kinase; n=1; uncultur... 30 7.7
UniRef50_Q4N662 Cluster: Vacuolar sorting protein 18, putative; ... 30 7.7
UniRef50_A7EBQ4 Cluster: Putative uncharacterized protein; n=1; ... 30 7.7
UniRef50_O51182 Cluster: Alanine racemase; n=21; Borrelia|Rep: A... 30 7.7
>UniRef50_A1ZBA8 Cluster: CG5493-PA; n=7; Coelomata|Rep: CG5493-PA
- Drosophila melanogaster (Fruit fly)
Length = 238
Score = 71.7 bits (168), Expect = 3e-12
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 22 PIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFDRF 80
P+EKPLK E+ L L+ LH F ++VN++ V LM YKS+P++WRKYAKFDR+
Sbjct: 28 PLEKPLKYGPEVNSLSDLVAALHREFESNYVNIEMVNHLMLSYKSNPREWRKYAKFDRY 86
>UniRef50_UPI00015B5281 Cluster: PREDICTED: similar to cysteine
dioxygenase; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to cysteine dioxygenase - Nasonia vitripennis
Length = 864
Score = 60.5 bits (140), Expect = 6e-09
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 39 LIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFDRFR 81
LIE+LH F+ ++V++ VQ LMA Y+S+P+DW+K+AKFDR+R
Sbjct: 669 LIEKLHEAFATNNVDIDYVQDLMAAYRSNPQDWKKFAKFDRYR 711
>UniRef50_Q4RPS4 Cluster: Chromosome 12 SCAF15007, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF15007, whole genome shotgun sequence
- Tetraodon nigroviridis (Green puffer)
Length = 95
Score = 60.5 bits (140), Expect = 6e-09
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 17 DMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAK 76
DME + KP L+ LI LH IF +NV++VQ +M Y+S+P+DW KYAK
Sbjct: 1 DMEQTEVAKP-------ESLDDLIRILHNIFESDSINVEEVQNIMESYESNPQDWLKYAK 53
Query: 77 FDRFR 81
FD++R
Sbjct: 54 FDQYR 58
>UniRef50_UPI0000D56995 Cluster: PREDICTED: similar to CG5493-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5493-PA - Tribolium castaneum
Length = 243
Score = 56.8 bits (131), Expect = 8e-08
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 33 IAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFDRFR 81
I L L++EL IF VNV+ V LM YKS+P DW+KYAKFDR+R
Sbjct: 51 INNLSDLVKELRLIFECDSVNVELVSFLMKSYKSNPVDWKKYAKFDRYR 99
>UniRef50_Q16878 Cluster: Cysteine dioxygenase type 1; n=23;
Eumetazoa|Rep: Cysteine dioxygenase type 1 - Homo
sapiens (Human)
Length = 200
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 36 LERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFDRFR 81
L LI LH +F+ VNV++VQ +M Y+SDP +W YAKFD++R
Sbjct: 12 LADLIRILHQLFAGDEVNVEEVQAIMEAYESDPTEWAMYAKFDQYR 57
>UniRef50_Q16857 Cluster: Cysteine dioxygenase; n=4;
Deuterostomia|Rep: Cysteine dioxygenase - Homo sapiens
(Human)
Length = 56
Score = 52.4 bits (120), Expect = 2e-06
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 36 LERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFDRF 80
L LI LH +F+ VNV++VQ +M Y+SDP +W YAKFD++
Sbjct: 12 LADLIRILHQLFAGDEVNVEEVQAIMEAYESDPIEWAMYAKFDQY 56
>UniRef50_Q20893 Cluster: Cysteine dioxygenase; n=2;
Caenorhabditis|Rep: Cysteine dioxygenase -
Caenorhabditis elegans
Length = 190
Score = 44.4 bits (100), Expect = 4e-04
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 38 RLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFD 78
+L+ ++ IF + ++V +V KLMA YKS+ +WR++A FD
Sbjct: 6 QLVVQIREIFQQKLIDVDEVMKLMASYKSNANEWRRFAIFD 46
>UniRef50_Q9U8F1 Cluster: Cysteine dioxygenase; n=1; Schistosoma
japonicum|Rep: Cysteine dioxygenase - Schistosoma
japonicum (Blood fluke)
Length = 212
Score = 37.5 bits (83), Expect = 0.051
Identities = 13/49 (26%), Positives = 31/49 (63%)
Query: 31 REIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFDR 79
+ ++ L LI+ + IF++ +NV ++ K++ ++ D +W+KY F++
Sbjct: 16 KTVSTLNDLIKTIRIIFNQKEINVNEIHKILNDFQCDFTEWQKYIYFNK 64
>UniRef50_Q2TUE7 Cluster: NADH-ubiquinone oxidoreductase; n=5;
stramenopiles|Rep: NADH-ubiquinone oxidoreductase -
Desmarestia viridis
Length = 191
Score = 37.1 bits (82), Expect = 0.067
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 6 ANCKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYK 65
ANC+L+V CTD EI P+ + + ER I +L GIF +H D+++++ Y
Sbjct: 81 ANCRLRVKTCTD-EINPLPSVVSLFPSANWWEREIWDLFGIFFSNH---PDLRRILTDYG 136
Query: 66 SDPKDWRK 73
+ RK
Sbjct: 137 FEGHPLRK 144
>UniRef50_A6SFW0 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 240
Score = 33.9 bits (74), Expect = 0.63
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 26 PLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFDRFR 81
P ++ +A L +++ G+ S + V+VQ ++ LM Y S+ +WRKYA D R
Sbjct: 26 PDSFHQLVADLSQILGPSSGLTS-ADVDVQQLRSLMERYISNEDEWRKYAFADLSR 80
>UniRef50_A1D473 Cluster: Cysteine dioxygenase; n=6;
Eurotiomycetidae|Rep: Cysteine dioxygenase -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 /
DSM 3700 / NRRL 181))
Length = 224
Score = 33.9 bits (74), Expect = 0.63
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 52 VNVQDVQKLMAGYKSDPKDWRKYAKFDRFR 81
VN D+Q+LM Y S+P++WR +A D R
Sbjct: 44 VNPLDIQRLMEQYVSNPEEWRPFALGDNSR 73
>UniRef50_A6ENU6 Cluster: Putative uncharacterized protein; n=1;
unidentified eubacterium SCB49|Rep: Putative
uncharacterized protein - unidentified eubacterium
SCB49
Length = 136
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 34 AGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKY 74
A E++I+E++ + R VNV + + Y P DW K+
Sbjct: 43 ATAEKIIDEMYLCYDRKEVNVSYISNRINKYSISPVDWHKF 83
>UniRef50_A3U961 Cluster: Putative uncharacterized protein; n=1;
Croceibacter atlanticus HTCC2559|Rep: Putative
uncharacterized protein - Croceibacter atlanticus
HTCC2559
Length = 502
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 2 DVENANCKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEELH---GIFSRSHVNVQDVQ 58
++E N +LK TD+ IL N+ IA +++ +EL + SR H+ +D+Q
Sbjct: 407 EIEALNAQLKNKLVTDIGILKDNSISNRNKIIATGQKVKDELEKSEDMISRKHILFRDIQ 466
Query: 59 KLMAGYK 65
++ +G++
Sbjct: 467 QIKSGFE 473
>UniRef50_A0LKZ5 Cluster: Mammalian cell entry related domain
protein precursor; n=1; Syntrophobacter fumaroxidans
MPOB|Rep: Mammalian cell entry related domain protein
precursor - Syntrophobacter fumaroxidans (strain DSM
10017 / MPOB)
Length = 359
Score = 33.1 bits (72), Expect = 1.1
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 19 EILPIEKPL-KVNREIAGLERLIE--ELHGIFSRSHVNVQDVQKLMAGYKSDPK 69
E LP+E+ K+ I G+ER I +L GI S SH V DV+ L+ S+ K
Sbjct: 177 EKLPLEEIAGKLTSAIEGIERFINSPDLKGILSSSHQAVNDVRALLHSIDSEIK 230
>UniRef50_O75489 Cluster: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 3, mitochondrial precursor; n=40;
Eukaryota|Rep: NADH dehydrogenase [ubiquinone]
iron-sulfur protein 3, mitochondrial precursor - Homo
sapiens (Human)
Length = 264
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 7 NCKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKS 66
N +++V TD E+ PIE + V + ER I ++ G+F +H D+++++ Y
Sbjct: 138 NSRIRVKTYTD-ELTPIESAVSVFKAANWYEREIWDMFGVFFANH---PDLRRILTDYGF 193
Query: 67 DPKDWRK 73
+ +RK
Sbjct: 194 EGHPFRK 200
>UniRef50_UPI00004985BE Cluster: cortexillin II; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: cortexillin II - Entamoeba
histolytica HM-1:IMSS
Length = 592
Score = 31.9 bits (69), Expect = 2.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 28 KVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAK 76
K+ E+ LE +EEL G+ N++D++K GY D K A+
Sbjct: 443 KLEEEVMELEEEMEELDGVSKNLRKNLEDIEKEKNGYGDSINDICKEAE 491
>UniRef50_Q637Z5 Cluster: Group-specific protein; n=10; Bacillus
cereus group|Rep: Group-specific protein - Bacillus
cereus (strain ZK / E33L)
Length = 75
Score = 31.9 bits (69), Expect = 2.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 23 IEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQ 58
+EK VN E+A L+ LI+ELHG + VQ ++
Sbjct: 3 LEKAKPVNEEVAELKELIKELHGSVHQLQSEVQQLR 38
>UniRef50_Q6P613 Cluster: NADH dehydrogenase (Ubiquinone) Fe-S
protein 3, 30kDa; n=11; Eumetazoa|Rep: NADH
dehydrogenase (Ubiquinone) Fe-S protein 3, 30kDa -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 250
Score = 31.5 bits (68), Expect = 3.3
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 7 NCKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKS 66
N +++V TD E+ P+E + V ER + +++G+F +H D+++++ Y
Sbjct: 128 NTRMRVMTYTD-ELTPVESAVPVFEAANWYEREVWDMYGVFFANH---PDLRRILTDYGF 183
Query: 67 DPKDWRK 73
+ +RK
Sbjct: 184 EGHPFRK 190
>UniRef50_Q5B5U9 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 192
Score = 31.5 bits (68), Expect = 3.3
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 33 IAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFD 78
+ L R + G+ S V+ D+Q+LM Y S+P+DW YA D
Sbjct: 26 VQDLSRALGPSSGLDS-DDVDPLDIQRLMELYTSNPEDWLPYALGD 70
>UniRef50_UPI000049A328 Cluster: hypothetical protein 326.t00008;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 326.t00008 - Entamoeba histolytica HM-1:IMSS
Length = 554
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 24 EKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQK 59
EK + I GLE+ EEL+ I S+S V V ++QK
Sbjct: 181 EKETLIGTNIKGLEKSEEELNKILSQSFVIVAEIQK 216
>UniRef50_A6TUX8 Cluster: Putative uncharacterized protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Putative
uncharacterized protein - Alkaliphilus metalliredigens
QYMF
Length = 284
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 19 EILPIEKPLKVNREIAGLERLIE--ELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKY 74
E+ P + +N EI G ++LIE ++ I+ + +NV +Q + + DP D R Y
Sbjct: 91 ELFPAFEGYTINSEI-GRQKLIEVYNVYQIYKQDDINVSQIQSFLMNHYGDP-DIRLY 146
>UniRef50_A5V1W8 Cluster: Translation elongation factor G; n=4;
Chloroflexaceae|Rep: Translation elongation factor G -
Roseiflexus sp. RS-1
Length = 701
Score = 30.7 bits (66), Expect = 5.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 1 MDVENAN---CKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEELHGIFSRSH 51
+D ENAN C + Q D ++P++ P+ RE AG+ L + + S H
Sbjct: 136 LDRENANFFRCIEQARQILDEAVVPMQLPIGEQREFAGIISLRRQRAWLISEKH 189
>UniRef50_A2QA26 Cluster: Remark: The A. terreus cds is included in
the lovastatin biosynthesis gene cluster; n=1;
Aspergillus niger|Rep: Remark: The A. terreus cds is
included in the lovastatin biosynthesis gene cluster -
Aspergillus niger
Length = 485
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 16 TDMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYA 75
T+ + P E+ K E+ +++ ++LH + + SH V ++ L A Y + +W+K
Sbjct: 266 TERKYYP-EEVCKGLGEVWQTKKIKQKLHALCAVSHCTVDCIKDLQAMYPAKMGEWKKIV 324
Query: 76 KFD 78
K +
Sbjct: 325 KIE 327
>UniRef50_Q5RLY7 Cluster: Cysteine dioxygenase; n=3;
Ascomycota|Rep: Cysteine dioxygenase - Ajellomyces
capsulata (Histoplasma capsulatum)
Length = 213
Score = 30.7 bits (66), Expect = 5.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 52 VNVQDVQKLMAGYKSDPKDWRKYAKFDRFR 81
V+ D+QKLM Y S+ +W +YA D R
Sbjct: 41 VDPMDIQKLMEDYTSNESEWERYAFGDAGR 70
>UniRef50_A4SVX0 Cluster: Putative uncharacterized protein; n=1;
Polynucleobacter sp. QLW-P1DMWA-1|Rep: Putative
uncharacterized protein - Polynucleobacter sp.
QLW-P1DMWA-1
Length = 356
Score = 30.3 bits (65), Expect = 7.7
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 3 VENANCKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEELHGIFS-RSH 51
VE C+L T++ I PI KP+ +N E E + E HG S +SH
Sbjct: 82 VEAFGCELPERYLTNLFIAPI-KPIIINLEYLSAEPWVSEFHGKASPQSH 130
>UniRef50_A4GJE4 Cluster: Predicted choline kinase; n=1; uncultured
marine bacterium EB0_50A10|Rep: Predicted choline kinase
- uncultured marine bacterium EB0_50A10
Length = 275
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 16 TDMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGY--KSDPKD--W 71
T I+ K + ++ E AGL + ++ I S +N Q + L GY KSD D
Sbjct: 174 TQENIIWNRKYVFIDWEYAGLNNPLFDIASIISSYSLNDQQIDSLWRGYGKKSDVDDEIL 233
Query: 72 RKYAKFDRF 80
RK+ KF F
Sbjct: 234 RKWIKFTYF 242
>UniRef50_Q4N662 Cluster: Vacuolar sorting protein 18, putative;
n=2; Theileria|Rep: Vacuolar sorting protein 18,
putative - Theileria parva
Length = 1013
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 21 LPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMA 62
L IE ++ +++ GL+ L L FSR ++V+D+ +L+A
Sbjct: 528 LTIEAGIEQGKDVEGLKTLYNSLKQKFSRLIISVKDIDELVA 569
>UniRef50_A7EBQ4 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 97
Score = 30.3 bits (65), Expect = 7.7
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 8 CKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEEL 43
C + S +ME++PI + +V+R+IA +R ++E+
Sbjct: 23 CSVMCSDIQNMELMPISRRHEVDRDIALNQRFLQEI 58
>UniRef50_O51182 Cluster: Alanine racemase; n=21; Borrelia|Rep:
Alanine racemase - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 372
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 3 VENANCKLKVSQCTDMEILPIEKPLKVNR----EIAGLERLIEELHGIFSRSH 51
+ N CK++ C ++ I+ I K LKV EI + I+E+ RSH
Sbjct: 303 INNKKCKIRGKVCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSH 355
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,423,444
Number of Sequences: 1657284
Number of extensions: 2800654
Number of successful extensions: 8147
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8125
Number of HSP's gapped (non-prelim): 31
length of query: 81
length of database: 575,637,011
effective HSP length: 60
effective length of query: 21
effective length of database: 476,199,971
effective search space: 10000199391
effective search space used: 10000199391
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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