Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000183-TA|BGIBMGA000183-PA|IPR010300|Cysteine
dioxygenase type I
(81 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 28 0.13
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 28 0.13
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 0.24
SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|... 26 0.54
SPCC18.16c |fmn1||riboflavin kinase Fmn1|Schizosaccharomyces pom... 25 1.7
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 24 2.9
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 24 2.9
SPBC1778.07 |||methyltransferase N2227 family|Schizosaccharomyce... 23 3.8
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 23 5.1
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 23 5.1
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 23 5.1
SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 23 6.7
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 23 6.7
SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyce... 23 6.7
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 22 8.9
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 22 8.9
SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|... 22 8.9
SPBC15D4.12c |mug98||sequence orphan|Schizosaccharomyces pombe|c... 22 8.9
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc... 22 8.9
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 22 8.9
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 22 8.9
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 28.3 bits (60), Expect = 0.13
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 12 VSQCTDMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDW 71
VS+ + M L + P K NR E + EEL HVN +D K+ A +D W
Sbjct: 567 VSEPSSMTALS-KSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGW 625
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 28.3 bits (60), Expect = 0.13
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 12 VSQCTDMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDW 71
VS+ + M L + P K NR E + EEL HVN +D K+ A +D W
Sbjct: 567 VSEPSSMTALS-KSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGW 625
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 27.5 bits (58), Expect = 0.24
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 25 KPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSD 67
K L + +E+A E+ I+ L IFS + ++ + GYK D
Sbjct: 576 KALDLKKEVAEREKRIQRLKEIFSVKSLEFREAVFSLFGYKLD 618
>SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 26.2 bits (55), Expect = 0.54
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 35 GLERLIEELHG--IFSRSHVNVQDVQKLMAGYKSDPKDWRKYA 75
GL++L E + G I S H +VQD Q M YK K+ + A
Sbjct: 211 GLKKLAEVILGRDIQSGQHSSVQDAQATMELYKKVKKEMDEVA 253
>SPCC18.16c |fmn1||riboflavin kinase Fmn1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 163
Score = 24.6 bits (51), Expect = 1.7
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 34 AGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDP 68
AGL++LIE++H R +N D + + YK DP
Sbjct: 127 AGLDKLIEDIHTDI-RVALNSMD-RPSYSSYKKDP 159
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 23.8 bits (49), Expect = 2.9
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 17 DMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNV 54
DM++L + P+ E+ GL ++ RSH +
Sbjct: 1357 DMQLLYVLGPIGETFEVNGLSHFPSDIEDTIERSHPRI 1394
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 23.8 bits (49), Expect = 2.9
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 66 SDPKDWRKYAKFDRFR 81
++P++WR+ KF+ +R
Sbjct: 512 NEPREWRQLFKFENYR 527
>SPBC1778.07 |||methyltransferase N2227 family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 23.4 bits (48), Expect = 3.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 51 HVNVQDVQKLMAGYKSDPKDW 71
HVNV +QK+ + K +DW
Sbjct: 95 HVNVDMMQKVSSTLKQIARDW 115
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 23.0 bits (47), Expect = 5.1
Identities = 13/67 (19%), Positives = 30/67 (44%)
Query: 4 ENANCKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAG 63
E + ++K+S+ + + ++ +I+ E +I G + +D+ K G
Sbjct: 344 EFQHAEVKLSEAKENLESIVTNQSDIDGKISSKEEVIGRAKGETDTTKSKFEDIVKTFDG 403
Query: 64 YKSDPKD 70
Y+S+ D
Sbjct: 404 YRSEMND 410
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 23.0 bits (47), Expect = 5.1
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 2 DVENANCKLKVSQCTDMEILPIEKPLKVNRE 32
DVEN ++ TDM + K +KV E
Sbjct: 42 DVENPGLNETLAPVTDMSVEETRKAIKVAHE 72
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 23.0 bits (47), Expect = 5.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 27 LKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKD 70
LK++ +RLI EL VNV ++ + Y++ KD
Sbjct: 534 LKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKD 577
>SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 269
Score = 22.6 bits (46), Expect = 6.7
Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 5 NANCKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEELHGI--FSRSHVNVQDVQKLMA 62
N C + + L ++ E+ + R++ E ++ +VN+ D+Q L +
Sbjct: 33 NMRCNSVLQYSLEKRKLTVQDLKDTRMELNNMIRILTEAMAAHEWTVDNVNIADIQSLQS 92
Query: 63 GYKSDPKDWRK 73
S K+++K
Sbjct: 93 TIHSTLKNFQK 103
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 22.6 bits (46), Expect = 6.7
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 8 CKLKVSQCTDMEILPIEKPLKVNREIA 34
C+L C LP+++ L+VN ++
Sbjct: 114 CRLGYPLCALFNCLPVKQKLEVNSSVS 140
>SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 568
Score = 22.6 bits (46), Expect = 6.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 52 VNVQDVQKLMAGYKSDPKDWRKYAKFDRFR 81
+ + D+Q+L+A YK + D Y F R
Sbjct: 497 MRISDIQELLAAYKREGIDPAPYYWFTEQR 526
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 22.2 bits (45), Expect = 8.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 3 VENANCKLKVSQCTDMEILPIEKPL 27
V+N + K K + TD L I KPL
Sbjct: 567 VQNVSTKQKSTNDTDNSKLKINKPL 591
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 22.2 bits (45), Expect = 8.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 64 YKSDPKDWRKYAKFDRFR 81
Y++D +WR+ DR+R
Sbjct: 205 YRNDRNNWRERTHNDRYR 222
>SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|chr
3|||Manual
Length = 700
Score = 22.2 bits (45), Expect = 8.9
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 19 EILPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAK 76
++LP + + + G + E L G ++ + D+ + K+D K + +YAK
Sbjct: 500 QLLPWVRGYSGSLLVLGSSNVDECLRGYLTKYDCSSADINPIGGISKTDLKSFLRYAK 557
>SPBC15D4.12c |mug98||sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 113
Score = 22.2 bits (45), Expect = 8.9
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 21 LPIEKPLKVNREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKFDR 79
LP++ +R G + I +++ SR+H N ++ + Y + K Y+ F R
Sbjct: 25 LPLKVRANTSRMNPGAKTWIPQINHRKSRNHYNRKETCQFPPLYNVEAKINHSYSAFYR 83
>SPAC8C9.17c |spc34||DASH complex subunit
Spc34|Schizosaccharomyces pombe|chr 1|||Manual
Length = 164
Score = 22.2 bits (45), Expect = 8.9
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
Query: 54 VQDVQK---LMAGYKSDPKDW 71
++D QK + A +KS PKDW
Sbjct: 43 IRDTQKEELIAAEFKSLPKDW 63
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 22.2 bits (45), Expect = 8.9
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 1 MDVENANCKLKVSQCTDMEILPIEKPLKVNREIAGLERLIEEL 43
+ +E +N +L+++ T L +EK + + + ER +EL
Sbjct: 700 LQLEKSNIQLQLTSLTSERSLALEKLNDLEKSLVLSERSKDEL 742
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 22.2 bits (45), Expect = 8.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 24 EKPLKVNREIAGLERLIEEL 43
EKP + +I GL + IEEL
Sbjct: 178 EKPTERYSDIGGLSKQIEEL 197
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,458
Number of Sequences: 5004
Number of extensions: 12606
Number of successful extensions: 40
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 22
length of query: 81
length of database: 2,362,478
effective HSP length: 60
effective length of query: 21
effective length of database: 2,062,238
effective search space: 43306998
effective search space used: 43306998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)
- SilkBase 1999-2023 -