GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000183-TA|BGIBMGA000183-PA|IPR010300|Cysteine
dioxygenase type I
         (81 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   1.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   1.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   2.6  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    19   5.9  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
          protein protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 45 GIFSRSHVNVQDVQKLMAGYKSDPKD 70
          G F  +H+N + ++K    YK+   D
Sbjct: 51 GAFEAAHLNAEGMKKYCETYKNSIYD 76


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 1.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 13  SQCTDMEILPIEKPLKVNRE 32
           S   +  +LP+ KP  VN+E
Sbjct: 761 SMSRNKALLPVIKPANVNKE 780


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 33 IAGLERLIEELHG 45
          + GLER+ EEL G
Sbjct: 30 VVGLERVAEELMG 42


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query: 5   NANCKLKVSQCTDMEILPIEKPLKV 29
           N NCK       ++E +P+  P+ +
Sbjct: 348 NNNCKKLYYNIINIEQIPVPVPVPI 372


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,352
Number of Sequences: 429
Number of extensions: 957
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 81
length of database: 140,377
effective HSP length: 47
effective length of query: 34
effective length of database: 120,214
effective search space:  4087276
effective search space used:  4087276
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.0 bits)
S2: 37 (19.0 bits)