Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000183-TA|BGIBMGA000183-PA|IPR010300|Cysteine
dioxygenase type I
(81 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g09400.1 68417.m01549 hypothetical protein similar to At3g453... 29 0.51
At3g33230.1 68416.m04296 hypothetical protein 29 0.51
At2g14340.1 68415.m01604 hypothetical protein 28 0.68
At2g46450.1 68415.m05780 cyclic nucleotide-regulated ion channel... 28 0.89
At3g45370.1 68416.m04898 hypothetical protein 27 1.2
At5g38190.1 68418.m04602 myosin heavy chain-related 27 1.6
At4g08810.1 68417.m01450 expressed protein 26 2.7
At3g58340.1 68416.m06503 meprin and TRAF homology domain-contain... 26 3.6
At1g51590.1 68414.m05808 mannosyl-oligosaccharide 1,2-alpha-mann... 26 3.6
At4g11230.1 68417.m01819 respiratory burst oxidase, putative / N... 25 4.8
At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 25 4.8
At3g08530.1 68416.m00990 clathrin heavy chain, putative similar ... 25 4.8
At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P4... 25 6.3
At3g21160.1 68416.m02673 mannosyl-oligosaccharide 1,2-alpha-mann... 25 6.3
At3g11130.1 68416.m01349 clathrin heavy chain, putative similar ... 25 6.3
At5g19130.1 68418.m02276 GPI transamidase component family prote... 25 8.3
At5g07290.1 68418.m00832 RNA recognition motif (RRM)-containing ... 25 8.3
At5g01510.1 68418.m00065 expressed protein contains Pfam domain,... 25 8.3
At1g04180.1 68414.m00408 flavin-containing monooxygenase family ... 25 8.3
>At4g09400.1 68417.m01549 hypothetical protein similar to At3g45350,
At2g14330
Length = 513
Score = 28.7 bits (61), Expect = 0.51
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 40 IEELHGIFSRSH----VNVQDVQKLMAGYKSDPKDWRKYAKFDR 79
++ H + R H + +QD+++ M ++ PKDW +Y FD+
Sbjct: 411 VDNQHQAYRRRHRQLLIKLQDLERGMRRLEAHPKDWVRYG-FDK 453
>At3g33230.1 68416.m04296 hypothetical protein
Length = 154
Score = 28.7 bits (61), Expect = 0.51
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 40 IEELHGIFSRSH----VNVQDVQKLMAGYKSDPKDWRKYAKFDR 79
++ H + R H + +QD+++ M ++ PKDW +Y FD+
Sbjct: 52 VDNQHQAYRRRHRQLLIKLQDLERGMRRLEAHPKDWVRYG-FDK 94
>At2g14340.1 68415.m01604 hypothetical protein
Length = 220
Score = 28.3 bits (60), Expect = 0.68
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 40 IEELHGIFSRSH----VNVQDVQKLMAGYKSDPKDWRKYAKFDR 79
++ H + R H + +QD+++ M ++ PKDW +Y FD+
Sbjct: 118 VDNQHQAYRRHHRQLLIKLQDLERGMRRLEAHPKDWVRY-DFDK 160
>At2g46450.1 68415.m05780 cyclic nucleotide-regulated ion channel,
putative (CNGC12) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 636
Score = 27.9 bits (59), Expect = 0.89
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 32 EIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKF 77
E+ G L +++ F SH+NV QKL ++ + WR +A F
Sbjct: 514 EVEGFILLPDDIK--FIASHLNVFQRQKLQRTFRLYSQQWRSWAAF 557
>At3g45370.1 68416.m04898 hypothetical protein
Length = 224
Score = 27.5 bits (58), Expect = 1.2
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 40 IEELHGIFSRSH----VNVQDVQKLMAGYKSDPKDWRKYAKFDR 79
++ H + R H + +QD+++ M + PKDW +Y FD+
Sbjct: 121 VDNQHQAYRRRHRQLLIKLQDLERGMRRLEVHPKDWVRYG-FDK 163
>At5g38190.1 68418.m04602 myosin heavy chain-related
Length = 969
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 38 RLIEELHGIFSRSHVNV----QDVQKLMAGYKSDPKDWRKY 74
R +E H + R H + Q+++ M ++DPKDW ++
Sbjct: 898 RTLEGQHRAYCRRHAELLRMMQEMELGMRRLEADPKDWERF 938
>At4g08810.1 68417.m01450 expressed protein
Length = 552
Score = 26.2 bits (55), Expect = 2.7
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 1 MDVENA-NCK--LKVSQCTDMEIL-PIEK-PLKVNREIAGLERLIEELHGIFSRSHVNVQ 55
M V+N+ +C LK+ C+D +L +E+ LKV + I LE ++G S ++
Sbjct: 110 MTVKNSIDCDEDLKIVNCSDPRVLVAVERFNLKVFKSIVFLE-YETPVNG----SKLDEC 164
Query: 56 DVQKLMAGYKSDPKDWRKYAKFDRFR 81
DV K K WR+Y F RFR
Sbjct: 165 DVSWRFRNKKE--KSWRRYRDFRRFR 188
>At3g58340.1 68416.m06503 meprin and TRAF homology
domain-containing protein / MATH domain-containing
protein similar to ubiquitin-specific protease 12
[Arabidopsis thaliana] GI:11993471; contains Pfam
profile PF00917: MATH domain
Length = 325
Score = 25.8 bits (54), Expect = 3.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 61 MAGYKSDPKDWRKYAKF 77
+A +KS P WR+Y KF
Sbjct: 56 VADFKSLPSGWRRYVKF 72
>At1g51590.1 68414.m05808 mannosyl-oligosaccharide
1,2-alpha-mannosidase, putative similar to
mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine
max][GI:6552504]
Length = 560
Score = 25.8 bits (54), Expect = 3.6
Identities = 9/18 (50%), Positives = 16/18 (88%)
Query: 28 KVNREIAGLERLIEELHG 45
K+N E++ LE+++EEL+G
Sbjct: 58 KLNEEVSRLEQMLEELNG 75
>At4g11230.1 68417.m01819 respiratory burst oxidase, putative /
NADPH oxidase, putative similar to respiratory burst
oxidase homolog F [gi:3242456], RbohAp108 [gi:2654868]
from Arabidopsis thaliana, respiratory burst oxidase
homolog [GI:16549087] from Solanum tuberosum; contains
Pfam profile PF01794 Ferric reductase like transmembrane
component
Length = 941
Score = 25.4 bits (53), Expect = 4.8
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 24 EKPLKVNREIAGLERLIEELHGIFSRSH--VNVQDVQKLMAGYKSD 67
++P + NR+ +G ER I L I S+ + V+ DVQ A D
Sbjct: 153 QRPTRPNRDGSGTERAIHGLKFISSKENGIVDWNDVQNNFAHLSKD 198
>At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3
domain-containing protein similar to eukaryotic protein
synthesis initiation factor [Homo sapiens] GI:3941724;
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 1544
Score = 25.4 bits (53), Expect = 4.8
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 24 EKPLKVNREIAGLERLIEELH-GIFSRSHVNVQDVQKLMAGYKSDPKD 70
EK L+V R + G RLI EL+ + +QKL+ GY DP +
Sbjct: 1030 EKRLQVRRRMLGNIRLIGELYKKRMLTEKIMHACIQKLL-GYNQDPHE 1076
>At3g08530.1 68416.m00990 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1703
Score = 25.4 bits (53), Expect = 4.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 32 EIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKS 66
E+A +L EE IF + ++NVQ V L+ +S
Sbjct: 1071 EVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNVRS 1105
>At5g04630.1 68418.m00468 cytochrome P450, putative cytochrome P450
77A3p, Glycine max, PIR:T05948
Length = 509
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 56 DVQKLMAGYKSDPKDWRKYAKFD 78
+V+ + G DPK W K KFD
Sbjct: 400 NVEFYLPGISEDPKIWSKPEKFD 422
>At3g21160.1 68416.m02673 mannosyl-oligosaccharide
1,2-alpha-mannosidase, putative similar to
mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine
max][GI:6552504]
Length = 572
Score = 25.0 bits (52), Expect = 6.3
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 28 KVNREIAGLERLIEELHGIFSRSHVN-VQDVQK 59
K+N E+ L++++EE+ + VN ++DVQ+
Sbjct: 59 KLNEEVLRLQQMLEEIKSVTEDVSVNSLKDVQE 91
>At3g11130.1 68416.m01349 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1705
Score = 25.0 bits (52), Expect = 6.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 32 EIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKS 66
E+A +L EE IF + ++NVQ V L+ +S
Sbjct: 1071 EVAVDAQLYEEAFAIFKKFNLNVQAVNVLLDNVRS 1105
>At5g19130.1 68418.m02276 GPI transamidase component family protein
/ Gaa1-like family protein contains Pfam profile:
PF04114 Gaa1-like, GPI transamidase component
Length = 699
Score = 24.6 bits (51), Expect = 8.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 30 NREIAGLERLIEELHGIFSRSHVNVQDVQKLMAGYKSDPKDWRKYAKF 77
NR+++ +L++++ +VQKL+ Y SD Y KF
Sbjct: 80 NRDVSDGSKLVKDIKNFRLNHEGQGVEVQKLIGKYMSDMGAEVSYQKF 127
>At5g07290.1 68418.m00832 RNA recognition motif (RRM)-containing
protein Mei2-like protein - Arabidopsis thaliana,
EMBL:D86122
Length = 907
Score = 24.6 bits (51), Expect = 8.3
Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Query: 41 EELHGIFSRSHVNVQDVQKLM 61
EELHGIFS S+ +++V++ M
Sbjct: 309 EELHGIFS-SYGEIREVRRTM 328
>At5g01510.1 68418.m00065 expressed protein contains Pfam domain,
PF04884: Protein of unknown function, DUF647
Length = 509
Score = 24.6 bits (51), Expect = 8.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 64 YKSDPKDWRKYAKF 77
+ DPK WR YA F
Sbjct: 206 FDDDPKQWRMYADF 219
>At1g04180.1 68414.m00408 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenases YUCCA [gi:16555352],
YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
Arabidopsis thaliana; contains Pfam profile PF00743
Length = 421
Score = 24.6 bits (51), Expect = 8.3
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 7/38 (18%)
Query: 47 FSRSHVNVQDVQK-------LMAGYKSDPKDWRKYAKF 77
FSR HV + D QK L GY+S+ W + ++F
Sbjct: 313 FSRHHVELVDGQKLDIDAVVLATGYRSNVPSWLQESEF 350
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,904,707
Number of Sequences: 28952
Number of extensions: 63536
Number of successful extensions: 192
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 181
Number of HSP's gapped (non-prelim): 19
length of query: 81
length of database: 12,070,560
effective HSP length: 60
effective length of query: 21
effective length of database: 10,333,440
effective search space: 217002240
effective search space used: 217002240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)
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