Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000182-TA|BGIBMGA000182-PA|IPR011701|Major facilitator
superfamily MFS_1, IPR007114|Major facilitator superfamily
         (474 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   3.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.2  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    23   7.3  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    23   7.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   7.3  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 280 PTEDMMDRV-KIIAFESNVDAHKNVKATYLDLIKVQEIRWKNI 321
           P   M+ R+ +    ++N   +  VK+T   L+K++   WK++
Sbjct: 712 PPLSMLQRMAEFTKLDTNRQVNSAVKSTIQSLMKLKSPEWKDL 754


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 80  IQESECYSDCTEYEYKTDFVNTIISEWDLVCDRSWL 115
           +Q   C   C  Y+Y     N I S  +L+CD+ ++
Sbjct: 310 LQLPGCEVLCPLYKYLQLIENVIPSNEELICDKRFV 345


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 80  IQESECYSDCTEYEYKTDFVNTIISEWDLVCDRSWL 115
           +Q   C   C  Y+Y     N I S  +L+CD+ ++
Sbjct: 325 LQLPGCEVLCPLYKYLQLIENVIPSNEELICDKRFV 360


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 433 LTATGPWIPPTVFGLV 448
           + A   W+PP VF LV
Sbjct: 23  VNAAPDWVPPEVFDLV 38


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 433 LTATGPWIPPTVFGLV 448
           + A   W+PP VF LV
Sbjct: 23  VNAAPDWVPPEVFDLV 38


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 324 CLTWFILGLSFYGSNQYIGQ--TSPNVFVAIAMAGAIQTTFDPFLVLLL 370
           C+ W      ++G+   +    TS +V ++++ +  I   F P L ++L
Sbjct: 858 CVIWLAFVPLYFGTGNNVALRITSMSVTISLSASVTIACLFSPKLYIIL 906


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.138    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,846
Number of Sequences: 429
Number of extensions: 4953
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 7
length of query: 474
length of database: 140,377
effective HSP length: 60
effective length of query: 414
effective length of database: 114,637
effective search space: 47459718
effective search space used: 47459718
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)