GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000181-TA|BGIBMGA000181-PA|IPR007110|Immunoglobulin-
like, IPR008957|Fibronectin, type III-like fold,
IPR003599|Immunoglobulin subtype, IPR003598|Immunoglobulin subtype 2,
IPR013151|Immunoglobulin
         (412 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   0.94 
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   8.7  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   8.7  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 27.1 bits (57), Expect = 0.94
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 284  GIETRDTNSGIITSEMTINHAGPEHAGEYRCLARNLYGADELVFRLFVKERPSIPEEVRI 343
            G++T  T + +    +T    G   A     ++ +LY A  L  R+       I  E R+
Sbjct: 2807 GMQTNRTGADLRAGSLTFT--GSRDAKRPSKISSSLYQATFLALRVLC-----ICFETRL 2859

Query: 344  SDVWPRKARITWRMAR 359
            S+ WPR AR+   + R
Sbjct: 2860 SNEWPRIARVMRDLGR 2875


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 8.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 280  HGSGGIETRDTNSGIITSEM 299
            HG+GG+ T  TN+ I   E+
Sbjct: 1161 HGTGGVHTHMTNTRITDPEI 1180


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 8.7
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 166 EYSADGDNWRHVLWSQSEASDMGGGSVLSDGTV--WLKEVTPGHEGWYR 212
           ++ A+ D  RH  W+     ++G       G V   L +V  GH G++R
Sbjct: 880 QWDAEADTSRHTRWAHRVLPNIGSWQSRKHGDVSFHLCQVLSGH-GFFR 927


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.133    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,861
Number of Sequences: 2123
Number of extensions: 16733
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 3
length of query: 412
length of database: 516,269
effective HSP length: 66
effective length of query: 346
effective length of database: 376,151
effective search space: 130148246
effective search space used: 130148246
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)