GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000180-TA|BGIBMGA000180-PA|IPR002372|Pyrrolo-quinoline
quinone, IPR000719|Protein kinase, IPR010513|Ribonuclease 2-5A,
IPR011009|Protein kinase-like, IPR011047|Quinonprotein alcohol
dehydrogenase-like, IPR008271|Serine/threonine protein kinase, active
site, IPR002290|Serine/threonine protein kinase, IPR006567|PUG
         (973 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    54   4e-09
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    26   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   7.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   7.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 54.4 bits (125), Expect = 4e-09
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 576 VEILRQATMGLSHLHSMDIVHRDVKPHNVLLSMPSGTGEVRAMISDFGLSKKLNIGRVSF 635
           + I RQ  +G+ HL    +VHRD+   NVL+            +SDFGLS+ +    V +
Sbjct: 595 LSIARQVALGMEHLAKTRVVHRDLAARNVLV-----CENHTVKVSDFGLSRDVYQDNV-Y 648

Query: 636 SRRSGVTGTDGWIAPEMINGERTTTSIDIFSLGCVFYYVLSKGQHPF 682
            +  G      W+A E +  +R TT  D++S G + + +++ G  P+
Sbjct: 649 CKNGGGKLPVRWMALESLTHQRYTTYSDVWSFGVLLWEIVTLGGTPY 695


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 507 AVKRLLPECFTFADREVALLRESDAHAHVVRYYCTERDKQFRYIALELCSATLQDYVEKK 566
           AV+ LL +C+      V++   S   A + ++Y T     F  I   LC A L   +  +
Sbjct: 42  AVEHLLIQCYI----AVSIFGSSSFEADLRQFYKTAYSAIFTVIDFSLCKAILVHAITIR 97

Query: 567 LNFECKIDSVEILRQATMGLSHLHSMD 593
             F      V I+  +T  +  L  ++
Sbjct: 98  STFSWTFIDVFIMLTSTAFVFRLKQLN 124


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 216 FNSIGDDTLDHIMEDAKTLSNGKGLKNSNIELYPTLYVGEHNHGLYALSSLV 267
           FN I +D    I++      +  GLK  N +L   + VGE   G +  S++V
Sbjct: 219 FNMISNDDESDIIQGGYI--SVTGLKRVNPKLKVLISVGEGRDGSHRFSTMV 268


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 12/124 (9%)

Query: 63   IPE--LVANAPCRSTDGILYTGKKSDTWFMIDPLTGFREHVSGFDKSKIFKSDDENTCNS 120
            +PE  +   A   STD IL + K       ++P  G  E+ + + K     +DD+     
Sbjct: 1200 VPEAPIAVKALVMSTDSILASWKPP-----VEP-NGIVEYYTVYYKP--VSTDDKTEVKP 1251

Query: 121  EKKKGIYVARTEYNILMHDSKNVNHKWNVTFFDYTSLAMGKDMLNDYGTIHFTSTSNGRV 180
              +K +   R +   L H +KN++      F+   +  +G+   +   T+  +++   ++
Sbjct: 1252 TSQKIVPNLRNQN--LSHQAKNLDSNLKYEFWVTAATTIGEGQPSKKVTVSPSASVPAKI 1309

Query: 181  MSFD 184
             SFD
Sbjct: 1310 ASFD 1313


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.137    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,304
Number of Sequences: 317
Number of extensions: 9828
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 4
length of query: 973
length of database: 114,650
effective HSP length: 63
effective length of query: 910
effective length of database: 94,679
effective search space: 86157890
effective search space used: 86157890
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)