Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000179-TA|BGIBMGA000179-PA|undefined
         (179 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123098-1|BAC85534.1|  223|Homo sapiens protein ( Homo sapiens ...    33   0.42 
Z97653-2|CAB56188.1|  293|Homo sapiens meteorin, glial cell diff...    32   1.3  
BC082252-1|AAH82252.1|  311|Homo sapiens meteorin, glial cell di...    32   1.3  
BC050568-1|AAH50568.1|  262|Homo sapiens METRNL protein protein.       32   1.3  
BC000662-1|AAH00662.1|  293|Homo sapiens meteorin, glial cell di...    32   1.3  
AE006464-15|AAK61247.1|  293|Homo sapiens unknown protein.             32   1.3  

>AK123098-1|BAC85534.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41103 fis, clone BLADE2005459. ).
          Length = 223

 Score = 33.5 bits (73), Expect = 0.42
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 125 VSSTCGASAGAGEFLVMARRRLGRYSLVCAPR 156
           + S  G  AGAG +  + RRR+GR +L  APR
Sbjct: 49  LGSLPGCGAGAGPWAALGRRRIGRLALWAAPR 80


>Z97653-2|CAB56188.1|  293|Homo sapiens meteorin, glial cell
           differentiation regulator protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 129 CGASAGAGEFLVMARRRLGRYSLVCAPRVDDW 160
           CG   G G FL M   R G   L CAPR  ++
Sbjct: 242 CGVHPGPGTFLFMGWSRFGEARLGCAPRFQEF 273


>BC082252-1|AAH82252.1|  311|Homo sapiens meteorin, glial cell
           differentiation regulator-like protein.
          Length = 311

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 15/47 (31%), Positives = 19/47 (40%)

Query: 129 CGASAGAGEFLVMARRRLGRYSLVCAPRVDDWVQLVLKRNADGTAHC 175
           CG   G G+FL       G   L CAPR  D+ ++       G   C
Sbjct: 260 CGVRPGHGDFLFTGHMHFGEARLGCAPRFKDFQRMYRDAQERGLNPC 306


>BC050568-1|AAH50568.1|  262|Homo sapiens METRNL protein protein.
          Length = 262

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 15/47 (31%), Positives = 19/47 (40%)

Query: 129 CGASAGAGEFLVMARRRLGRYSLVCAPRVDDWVQLVLKRNADGTAHC 175
           CG   G G+FL       G   L CAPR  D+ ++       G   C
Sbjct: 211 CGVRPGHGDFLFTGHMHFGEARLGCAPRFKDFQRMYRDAQERGLNPC 257


>BC000662-1|AAH00662.1|  293|Homo sapiens meteorin, glial cell
           differentiation regulator protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 129 CGASAGAGEFLVMARRRLGRYSLVCAPRVDDW 160
           CG   G G FL M   R G   L CAPR  ++
Sbjct: 242 CGVHPGPGTFLFMGWSRFGEARLGCAPRFQEF 273


>AE006464-15|AAK61247.1|  293|Homo sapiens unknown protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 129 CGASAGAGEFLVMARRRLGRYSLVCAPRVDDW 160
           CG   G G FL M   R G   L CAPR  ++
Sbjct: 242 CGVHPGPGTFLFMGWSRFGEARLGCAPRFQEF 273


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,356,191
Number of Sequences: 224733
Number of extensions: 533047
Number of successful extensions: 903
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 897
Number of HSP's gapped (non-prelim): 6
length of query: 179
length of database: 73,234,838
effective HSP length: 85
effective length of query: 94
effective length of database: 54,132,533
effective search space: 5088458102
effective search space used: 5088458102
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 62 (29.1 bits)