Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000178-TA|BGIBMGA000178-PA|undefined
(285 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51104| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 8e-20
SB_46301| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_14942| Best HMM Match : DUF895 (HMM E-Value=6e-07) 33 0.27
SB_41721| Best HMM Match : MFS_1 (HMM E-Value=2.2e-26) 31 0.82
SB_13098| Best HMM Match : 7tm_1 (HMM E-Value=0.53) 29 4.4
SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_54976| Best HMM Match : MFS_1 (HMM E-Value=0.00064) 29 5.8
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_27727| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-08) 28 7.6
SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_3856| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_51104| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 94.7 bits (225), Expect = 8e-20
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 26/149 (17%)
Query: 117 MLLLSVTFIYTGIELSFFSGVYSPSIGFTLAMGE-------------------------N 151
M+LLS+ F YTG+EL+FFSGVY +G A + N
Sbjct: 1 MMLLSLCFAYTGLELTFFSGVYGTCVGMYDAADDTVDWVDNLTTLVTPRLLRRNTQQLPN 60
Query: 152 AKQLVGLSGVFIGMGEVLGGALFGILGSKTTRWGRDPIVIMGXXXXXXXXXXXXXNLPTV 211
+K+L+GL+G+FIG+GE++GG FGI G +T R+GRDPIV+ G N+P+
Sbjct: 61 SKKLIGLTGMFIGVGEIIGGLTFGIFGKRTNRFGRDPIVLFGLFIHWVAFILIFLNIPSD 120
Query: 212 APFGDTSEVSYI-TPSAELAMFCSFLLGF 239
AP G T +V+Y+ P F S+ F
Sbjct: 121 APTGGTMKVAYLHAPKNTCKAFTSYWRDF 149
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 247 QIYSILGGNYSDNSTSAFALFKFTQVSGRSAL 278
QIYS+LG Y D+S AFALFKF Q SG +A+
Sbjct: 251 QIYSLLGFAYPDDSAPAFALFKFVQ-SGAAAI 281
>SB_46301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 247 QIYSILGGNYSDNSTSAFALFKFTQVSGRSAL 278
QIYS+LG Y D+S AFALFKF Q SG +A+
Sbjct: 21 QIYSLLGFAYPDDSAPAFALFKFVQ-SGAAAI 51
>SB_14942| Best HMM Match : DUF895 (HMM E-Value=6e-07)
Length = 523
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 224 TPSAELAMF---CSFLLGFGDACFNTQIYSILGGNYSDNSTSAFALFKFTQVSG 274
TP A L + L G+GDA + TQI ++ G ++DN AF+ ++ + G
Sbjct: 403 TPDASLVWIFYVLAALQGYGDAVWQTQINAMYGVYFADNQEPAFSNYRLWESLG 456
>SB_41721| Best HMM Match : MFS_1 (HMM E-Value=2.2e-26)
Length = 440
Score = 31.5 bits (68), Expect = 0.82
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 221 SYITPSAELAMFCSFLLGFGDACFNTQIYSILGGNYSDNSTSAFAL 266
S + A + + SF+ GFG +C T Y+++ G+++ ++A L
Sbjct: 117 SQVNTIAMMYLTYSFIFGFGSSCVFTPAYTVVPGHFTKWQSTAMGL 162
>SB_13098| Best HMM Match : 7tm_1 (HMM E-Value=0.53)
Length = 158
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 213 PFGDTSEVSYIT--PSAELAMFCSFLLGFGDACFNTQIYSILGGNYSDNSTSAFALFK 268
PF T V I P F + LLG+ ++ N IY I+G + AF L K
Sbjct: 91 PFAVTMVVKVILDKPIPRAVDFGTLLLGYANSACNVVIYVIMGKQFRQAFREAFGLRK 148
>SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 79 TEKSRFFYRTEVVEIAYRDAEGPLEAFKGALKLFCTKDMLLLSVTFIYTGIELSFFSG 136
T FFY ++ + + PL+ L + C L LS+T++Y+ + FSG
Sbjct: 624 TNSFLFFYLALFIKRGHAEIHLPLQDHLIGLLVGCFIMQLTLSLTYLYSAFKSGVFSG 681
>SB_54976| Best HMM Match : MFS_1 (HMM E-Value=0.00064)
Length = 538
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 112 FCTKDMLLLSVTFIYTGIELSFFSGVYSPSIGFTLAMGENAKQLVGL-SGVFIGMGEVLG 170
+CT+ L L + I G+ + V++ + + + E A L GL SG + G+G G
Sbjct: 426 YCTRPWLFLPIELIQ-GVTTA---AVWTSFVSYVGSKTEIATTLQGLVSGFYTGLGYATG 481
Query: 171 GALFGIL 177
G L G +
Sbjct: 482 GLLGGCM 488
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 37 GIVFLALLRPIKRTTTVEDAKVHQRSKTNQVRQFQYLMSEATTEKSRFFYRTEVVEIAYR 96
G++ RP+ V D H R +T + +YL + T+K Y E+ + +
Sbjct: 871 GVLMRFRERPVALAGDVSDMFCHVRLRTEDRKYHRYLWRDLETDKPPDVY--EINCLVFG 928
Query: 97 DAEGPLEA 104
D P EA
Sbjct: 929 DKSSPCEA 936
>SB_27727| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-08)
Length = 353
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 9/43 (20%)
Query: 219 EVSYITPSAELAMFCSFLLGFGDACFNTQIY-SILGGNYSDNS 260
++SY+ S LA FCS+L F +Y S++ GN++D +
Sbjct: 243 KLSYMAASVILAFFCSYLFAF--------VYTSVIAGNFTDTT 277
>SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 48 KRTTTVEDAKVHQRSKTNQVRQFQYLMSEATTEKSRFFYRTEVVEIAYR---DAEGPLEA 104
KR+ +D K ++ K + + + + +T+ +++ + YR D PL A
Sbjct: 119 KRSLDNDDEKEEEKEKEDVTYDLRQVTTRHSTKMRTDCTDYKLILLLYRLCADINLPLSA 178
Query: 105 FKGALKLFCTKDMLLLSVTFIYTG--IELSFFSGVYSPSIGFT 145
G+LKL+C + + I E ++ +Y P G T
Sbjct: 179 LWGSLKLWCNRTLCAARANVIGMAHLTEDPDYAKLYHPKAGGT 221
>SB_3856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 134 FSGVYSPSIGFTLAMGENAKQLVGLSGVFIGMGEVLGGALFGILG 178
FS ++ S+ +A GE + VG+S G+G ++GG L G+ G
Sbjct: 46 FSVTHAVSVASGIASGELSSAGVGVS--LSGIGVLVGGPLAGVAG 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.325 0.140 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,613,563
Number of Sequences: 59808
Number of extensions: 276836
Number of successful extensions: 816
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 809
Number of HSP's gapped (non-prelim): 13
length of query: 285
length of database: 16,821,457
effective HSP length: 81
effective length of query: 204
effective length of database: 11,977,009
effective search space: 2443309836
effective search space used: 2443309836
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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