GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000178-TA|BGIBMGA000178-PA|undefined
         (285 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.5  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   7.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.9  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 77  ATTEKSRFFYRTEVVEIAYRDAEGPLEAFKGALKLFCTKDMLLLSVTFIYTGIELSFFSG 136
           +TT K  F     +V++  R+  G + AF+    L CT    +L +  ++T I + FF  
Sbjct: 130 STTIKKLFNLHKILVKVV-REING-IFAFQ---VLMCTSMNFVLLIGDLHTSIYIIFFDM 184

Query: 137 VYSPSIGFTLAMGEN 151
            Y       L MG+N
Sbjct: 185 FYQHH-KIVLDMGKN 198


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 10  IKFQGKSHIDLE--TRNVVFGALTGVCVLGI 38
           I  +G+   DL+  T +V + ALTG C+  I
Sbjct: 78  IPMKGRLLHDLKGRTTSVPYDALTGQCIYSI 108


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 10  IKFQGKSHIDLE--TRNVVFGALTGVCVLGI 38
           I  +G+   DL+  T +V + ALTG C+  I
Sbjct: 78  IPMKGRLLHDLKGRTTSVPYDALTGQCIYSI 108


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 10  IKFQGKSHIDLE--TRNVVFGALTGVCVLGI 38
           I  +G+   DL+  T +V + ALTG C+  I
Sbjct: 78  IPMKGRLLHDLKGRTTSVPYDALTGQCIYSI 108


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.140    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,728
Number of Sequences: 317
Number of extensions: 2041
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 285
length of database: 114,650
effective HSP length: 56
effective length of query: 229
effective length of database: 96,898
effective search space: 22189642
effective search space used: 22189642
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 43 (21.4 bits)