GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000178-TA|BGIBMGA000178-PA|undefined
         (285 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071334-1|AAL48956.1|  436|Drosophila melanogaster RE35942p pro...   214   1e-55
AE014297-1533|AAF54824.2|  436|Drosophila melanogaster CG18549-P...   214   1e-55
AY118773-1|AAM50633.1| 1073|Drosophila melanogaster GH11711p pro...    31   1.4  
AY058332-1|AAL13561.1|  457|Drosophila melanogaster GH10507p pro...    31   1.4  
AE014134-1922|AAF52981.2|  457|Drosophila melanogaster CG18284-P...    31   1.4  
AE014134-1921|AAF52979.2| 1073|Drosophila melanogaster CG31872-P...    31   1.4  

>AY071334-1|AAL48956.1|  436|Drosophila melanogaster RE35942p
           protein.
          Length = 436

 Score =  214 bits (522), Expect = 1e-55
 Identities = 102/169 (60%), Positives = 123/169 (72%), Gaps = 1/169 (0%)

Query: 104 AFKGALKLFCTKDMLLLSVTFIYTGIELSFFSGVYSPSIGFTLAMGENAKQLVGLSGVFI 163
           A K A +LF TK MLLLS+ F YTG+ELSFFSGV+  +IGFT  + E  K++VGL G+ I
Sbjct: 215 ALKSAGQLFLTKKMLLLSLAFFYTGLELSFFSGVFGSAIGFTTKIAETPKEIVGLVGICI 274

Query: 164 GMGEVLGGALFGILGSKTTRWGRDPIVIMGXXXXXXXXXXXXXNLPTVAPFGDTSEVSYI 223
           G GEV GG LFGILG+KTTR+GRDPIVI G             NLP  APF DT+++SY+
Sbjct: 275 GAGEVFGGGLFGILGNKTTRYGRDPIVIAGYVMHMAAFFMTFINLPNSAPFKDTTDISYL 334

Query: 224 -TPSAELAMFCSFLLGFGDACFNTQIYSILGGNYSDNSTSAFALFKFTQ 271
             P A +A+ C+FLLG GDACFNTQIYS+LGG Y +N+  AFALFKFTQ
Sbjct: 335 DPPRASIALVCAFLLGLGDACFNTQIYSMLGGEYVNNAVGAFALFKFTQ 383



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 30/45 (66%), Positives = 35/45 (77%)

Query: 1   MFFGNLFVFIKFQGKSHIDLETRNVVFGALTGVCVLGIVFLALLR 45
           MF GNLFV+ +FQ K+ ID ETRN+V G LT + VLGIVFLA LR
Sbjct: 146 MFIGNLFVYYQFQDKTRIDKETRNLVIGVLTVIAVLGIVFLAALR 190


>AE014297-1533|AAF54824.2|  436|Drosophila melanogaster CG18549-PA
           protein.
          Length = 436

 Score =  214 bits (522), Expect = 1e-55
 Identities = 102/169 (60%), Positives = 123/169 (72%), Gaps = 1/169 (0%)

Query: 104 AFKGALKLFCTKDMLLLSVTFIYTGIELSFFSGVYSPSIGFTLAMGENAKQLVGLSGVFI 163
           A K A +LF TK MLLLS+ F YTG+ELSFFSGV+  +IGFT  + E  K++VGL G+ I
Sbjct: 215 ALKSAGQLFLTKKMLLLSLAFFYTGLELSFFSGVFGSAIGFTTKIAETPKEIVGLVGICI 274

Query: 164 GMGEVLGGALFGILGSKTTRWGRDPIVIMGXXXXXXXXXXXXXNLPTVAPFGDTSEVSYI 223
           G GEV GG LFGILG+KTTR+GRDPIVI G             NLP  APF DT+++SY+
Sbjct: 275 GAGEVFGGGLFGILGNKTTRYGRDPIVIAGYVMHMAAFFMTFINLPNSAPFKDTTDISYL 334

Query: 224 -TPSAELAMFCSFLLGFGDACFNTQIYSILGGNYSDNSTSAFALFKFTQ 271
             P A +A+ C+FLLG GDACFNTQIYS+LGG Y +N+  AFALFKFTQ
Sbjct: 335 DPPRASIALVCAFLLGLGDACFNTQIYSMLGGEYVNNAVGAFALFKFTQ 383



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 30/45 (66%), Positives = 35/45 (77%)

Query: 1   MFFGNLFVFIKFQGKSHIDLETRNVVFGALTGVCVLGIVFLALLR 45
           MF GNLFV+ +FQ K+ ID ETRN+V G LT + VLGIVFLA LR
Sbjct: 146 MFIGNLFVYYQFQDKTRIDKETRNLVIGVLTVIAVLGIVFLAALR 190


>AY118773-1|AAM50633.1| 1073|Drosophila melanogaster GH11711p
           protein.
          Length = 1073

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 223 ITPSAELAMFCSFLLGFGDACFNTQIYSILGGNYSDNSTSAFALFKFTQVSGRSA 277
           + PS   A+F   + GF    FN  +  IL G+ S  S SA  ++ F Q+ G SA
Sbjct: 925 LIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGS-SAKQIYHFAQLQGNSA 978


>AY058332-1|AAL13561.1|  457|Drosophila melanogaster GH10507p
           protein.
          Length = 457

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 223 ITPSAELAMFCSFLLGFGDACFNTQIYSILGGNYSDNSTSAFALFKFTQVSGRSA 277
           + PS   A+F   + GF    FN  +  IL G+ S  S SA  ++ F Q+ G SA
Sbjct: 308 LIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGS-SAKQIYHFAQLQGNSA 361


>AE014134-1922|AAF52981.2|  457|Drosophila melanogaster CG18284-PA
           protein.
          Length = 457

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 223 ITPSAELAMFCSFLLGFGDACFNTQIYSILGGNYSDNSTSAFALFKFTQVSGRSA 277
           + PS   A+F   + GF    FN  +  IL G+ S  S SA  ++ F Q+ G SA
Sbjct: 308 LIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGS-SAKQIYHFAQLQGNSA 361


>AE014134-1921|AAF52979.2| 1073|Drosophila melanogaster CG31872-PA
           protein.
          Length = 1073

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 223 ITPSAELAMFCSFLLGFGDACFNTQIYSILGGNYSDNSTSAFALFKFTQVSGRSA 277
           + PS   A+F   + GF    FN  +  IL G+ S  S SA  ++ F Q+ G SA
Sbjct: 925 LIPSRICAIFEFVVCGFNFNSFNMTLSPILEGHASQGS-SAKQIYHFAQLQGNSA 978


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.325    0.140    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,281,256
Number of Sequences: 52641
Number of extensions: 424470
Number of successful extensions: 1177
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1171
Number of HSP's gapped (non-prelim): 8
length of query: 285
length of database: 24,830,863
effective HSP length: 84
effective length of query: 201
effective length of database: 20,409,019
effective search space: 4102212819
effective search space used: 4102212819
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)