Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000177-TA|BGIBMGA000177-PA|IPR009724|Protein of unknown
function DUF1301
         (213 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060605-1|AAL28153.1|  236|Drosophila melanogaster GH02466p pro...   195   3e-50
AE014296-1298|AAF50531.2|  236|Drosophila melanogaster CG7506-PA...   195   3e-50
BT030452-1|ABP87894.1|  364|Drosophila melanogaster IP17218p pro...    30   2.1  
BT029955-1|ABM92829.1|  272|Drosophila melanogaster IP17418p pro...    30   2.1  
BT029064-1|ABJ16997.1|  204|Drosophila melanogaster IP07454p pro...    29   3.6  
AE013599-1663|AAF58408.1|  186|Drosophila melanogaster CG4627-PA...    29   3.6  

>AY060605-1|AAL28153.1|  236|Drosophila melanogaster GH02466p
           protein.
          Length = 236

 Score =  195 bits (476), Expect = 3e-50
 Identities = 89/169 (52%), Positives = 117/169 (69%)

Query: 45  KEETPIGTEKIYYGTLTPQIKAIKIFSLCTSIAGIAIQPMLIREASSIGSTSLLVAICSV 104
           K E+    ++IYYGTL P++K +K FSL TS+AG+A QP+L+ +   IG T + V +C+V
Sbjct: 62  KTESDDALQRIYYGTLAPRMKMVKFFSLSTSLAGLAAQPILLEQGMKIGGTGMAVFLCTV 121

Query: 105 VGFFTFVTPILLHFITKKYVTEIYYNAETSTYKAITINFFATKRIHEFKVEDVFVPDVPG 164
            GFFTFVTP+LLHFITKKYVTE++YN  T  Y A TI+    K    F+  DV VP+VPG
Sbjct: 122 GGFFTFVTPLLLHFITKKYVTELHYNPLTEEYTATTISLLLQKIKTTFRPNDVVVPEVPG 181

Query: 165 MFTTMHANGKPLFIEARFFNNPLHYAKIMGYDKPMDFKLGETQESKNQK 213
           MFT+   N +PLF++   F++P HY KIMGYDKP+DFKL  T   +  K
Sbjct: 182 MFTSFLVNKRPLFVDPALFDDPEHYVKIMGYDKPIDFKLDLTPNPEKSK 230


>AE014296-1298|AAF50531.2|  236|Drosophila melanogaster CG7506-PA
           protein.
          Length = 236

 Score =  195 bits (476), Expect = 3e-50
 Identities = 89/169 (52%), Positives = 117/169 (69%)

Query: 45  KEETPIGTEKIYYGTLTPQIKAIKIFSLCTSIAGIAIQPMLIREASSIGSTSLLVAICSV 104
           K E+    ++IYYGTL P++K +K FSL TS+AG+A QP+L+ +   IG T + V +C+V
Sbjct: 62  KTESDDALQRIYYGTLAPRMKMVKFFSLSTSLAGLAAQPILLEQGMKIGGTGMAVFLCTV 121

Query: 105 VGFFTFVTPILLHFITKKYVTEIYYNAETSTYKAITINFFATKRIHEFKVEDVFVPDVPG 164
            GFFTFVTP+LLHFITKKYVTE++YN  T  Y A TI+    K    F+  DV VP+VPG
Sbjct: 122 GGFFTFVTPLLLHFITKKYVTELHYNPLTEEYTATTISLLLQKIKTTFRPNDVVVPEVPG 181

Query: 165 MFTTMHANGKPLFIEARFFNNPLHYAKIMGYDKPMDFKLGETQESKNQK 213
           MFT+   N +PLF++   F++P HY KIMGYDKP+DFKL  T   +  K
Sbjct: 182 MFTSFLVNKRPLFVDPALFDDPEHYVKIMGYDKPIDFKLDLTPNPEKSK 230


>BT030452-1|ABP87894.1|  364|Drosophila melanogaster IP17218p
           protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 124 VTEIYYNAETSTYKAITINFFATKRIHEFKVEDVFVPDVPGMFTTMHANGKPLFIEARFF 183
           V  + +N + S   AI IN   TK+I +  +E   +     + +T++ N    FI+ + +
Sbjct: 127 VASVKFNEKLSD--AIDINVLGTKKILDLVMEMKHLKSFVHI-STLYCNCNRKFIKEQVY 183

Query: 184 NNPLHYAKIMGYDKPMD 200
            N + Y KIM   +  D
Sbjct: 184 ENEIGYEKIMQIYRTFD 200


>BT029955-1|ABM92829.1|  272|Drosophila melanogaster IP17418p
           protein.
          Length = 272

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 124 VTEIYYNAETSTYKAITINFFATKRIHEFKVEDVFVPDVPGMFTTMHANGKPLFIEARFF 183
           V  + +N + S   AI IN   TK+I +  +E   +     + +T++ N    FI+ + +
Sbjct: 127 VASVKFNEKLSD--AIDINVLGTKKILDLVMEMKHLKSFVHI-STLYCNCNRKFIKEQVY 183

Query: 184 NNPLHYAKIMGYDKPMD 200
            N + Y KIM   +  D
Sbjct: 184 ENEIGYEKIMQIYRTFD 200


>BT029064-1|ABJ16997.1|  204|Drosophila melanogaster IP07454p
           protein.
          Length = 204

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 60  LTPQIKAIKIFSLCTSIAGIAIQPMLIREASSIGSTSLLVAICSVVGFFTFVTPILLHFI 119
           L   +  +K++    + AG  I    +  A  + + +L  AI + +G    +T  L  + 
Sbjct: 61  LVAALSRLKVYQAVITAAGTPIV-FALGSAGQLSTDAL--AIYAAIGVTGLITLTLASYA 117

Query: 120 TKKYVTEIYYNAETSTYKAITINFFATKRIHEFKVEDV 157
           +   V  IY N E    K   ++F+  ++    + ED+
Sbjct: 118 SSNLVGFIYVNEEQDLLKLAYVDFWGRRQETLIETEDL 155


>AE013599-1663|AAF58408.1|  186|Drosophila melanogaster CG4627-PA
           protein.
          Length = 186

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 60  LTPQIKAIKIFSLCTSIAGIAIQPMLIREASSIGSTSLLVAICSVVGFFTFVTPILLHFI 119
           L   +  +K++    + AG  I    +  A  + + +L  AI + +G    +T  L  + 
Sbjct: 43  LVAALSRLKVYQAVITAAGTPIV-FALGSAGQLSTDAL--AIYAAIGVTGLITLTLASYA 99

Query: 120 TKKYVTEIYYNAETSTYKAITINFFATKRIHEFKVEDV 157
           +   V  IY N E    K   ++F+  ++    + ED+
Sbjct: 100 SSNLVGFIYVNEEQDLLKLAYVDFWGRRQETLIETEDL 137


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.136    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,718,795
Number of Sequences: 52641
Number of extensions: 367578
Number of successful extensions: 705
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 703
Number of HSP's gapped (non-prelim): 6
length of query: 213
length of database: 24,830,863
effective HSP length: 82
effective length of query: 131
effective length of database: 20,514,301
effective search space: 2687373431
effective search space used: 2687373431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)