Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000175-TA|BGIBMGA000175-PA|undefined
         (455 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   4.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   7.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   7.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   7.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   7.8  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 70  DKHEWFRRLSTAIAEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSE 118
           + H+ +  +   I +    S   +    K N ++ +KDG + AVYK  +
Sbjct: 160 ESHKPYIDVVVPITQFTLLSIGETAMGIKLNASDNDKDGYKRAVYKIGQ 208



 Score = 23.0 bits (47), Expect = 4.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 383 KSNDTNENKDGIELAVYKFSE 403
           K N ++ +KDG + AVYK  +
Sbjct: 188 KLNASDNDKDGYKRAVYKIGQ 208


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 98  KSNDTNENKDGIELAVYKFSE 118
           K N ++ +KDG + AVYK  +
Sbjct: 188 KLNASDNDKDGYKRAVYKIGQ 208



 Score = 23.0 bits (47), Expect = 4.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 383 KSNDTNENKDGIELAVYKFSE 403
           K N ++ +KDG + AVYK  +
Sbjct: 188 KLNASDNDKDGYKRAVYKIGQ 208


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 413 SNKSDTGSEGVTISSLGQTLPSDSEAYEKNFWPYLIKI 450
           S++ D G +G   S+       D E  ++  +P++ K+
Sbjct: 180 SDEQDDGDDGQGSSTNNDEDDDDEETGDRQIYPWMRKV 217


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 413 SNKSDTGSEGVTISSLGQTLPSDSEAYEKNFWPYLIKI 450
           S++ D G +G   S+       D E  ++  +P++ K+
Sbjct: 180 SDEQDDGDDGQGSSTNNDEDDDDEETGDRQIYPWMRKV 217


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 120 DTVAFAKTSPKSPSPDCECRTLPAE 144
           + V+ + T+P +PSP  E R  P++
Sbjct: 89  EKVSVSPTTPPTPSPPPEERLTPSK 113


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 413 SNKSDTGSEGVTISSLGQTLPSDSEAYEKNFWPYLIKI 450
           S++ D G +G   S+       D E  ++  +P++ K+
Sbjct: 180 SDEQDDGDDGQGSSTNNDEDDDDEETGDRQIYPWMRKV 217


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.130    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,130
Number of Sequences: 317
Number of extensions: 3508
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 11
length of query: 455
length of database: 114,650
effective HSP length: 59
effective length of query: 396
effective length of database: 95,947
effective search space: 37995012
effective search space used: 37995012
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)