Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000175-TA|BGIBMGA000175-PA|undefined
(455 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 59 1e-09
SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase Nak1|Schizosacch... 35 0.020
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.33
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 31 0.33
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 28 2.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 4.1
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 27 5.4
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 27 5.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 5.4
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 27 5.4
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 27 7.2
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 26 9.5
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 26 9.5
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 26 9.5
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 58.8 bits (136), Expect = 1e-09
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 269 IKLHLEIQGLEGRLSFNLPPPPHDRVWIGFRTNPQLVLKARPAVGARTLRFTHISNWIEQ 328
+ L + + + G++ + PPP +RVW F P+L L P V + L ++ N+I Q
Sbjct: 315 LALVIRLTHVSGKVRLLIKPPPSNRVWYAFYEKPRLHLIVEPMVARKQLTNNYLINFITQ 374
Query: 329 KLSKEFEKVLVLPNMEDIIIDIMTPTPVQ 357
KL + + +V+PNM D+ I P++
Sbjct: 375 KLVELVHETIVMPNMNDLAFFIDNEAPIK 403
>SPBC17F3.02 |nak1|orb3, mor4|PAK-related kinase
Nak1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 35.1 bits (77), Expect = 0.020
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 374 SSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISSLGQTLP 433
+ D S PD +++DT + DG E K + + + TS + T + T + G +P
Sbjct: 301 ADDGSDPDQETSDTAASDDGWEFGTIKQGQSNVSSITGTSTSTTTAATSST-TVTGTVIP 359
Query: 434 SDSEAYE 440
S +E
Sbjct: 360 KSSTVHE 366
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 89 SSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTS 128
+ D S PD +++DT + DG E K + + + TS
Sbjct: 301 ADDGSDPDQETSDTAASDDGWEFGTIKQGQSNVSSITGTS 340
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 31.1 bits (67), Expect = 0.33
Identities = 22/105 (20%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 82 IAEANAASSDSSGPDDKSNDTNEN--KDGIELAVYKFSEKDTVAFAKTSPKSPSPDCEC- 138
+ A A + + +S +T+EN K+ ++ +V + EK+ +A ++ K+ PD E
Sbjct: 70 VVSAEGAEASTGDASTQSPETSENVVKNSVDESVAEKPEKEDLAVIESEDKAAKPDGEIK 129
Query: 139 RTLPAELTWVNTALARVAYDVMRDPVIIARVQNRIQRKLNTLKKR 183
+ + E+T +T+ ++ ++ + + + + +K+ LK+R
Sbjct: 130 KNVETEVTSRSTS-SQEKDELEKQVKTLHDLNEQKDKKIKELKER 173
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 31.1 bits (67), Expect = 0.33
Identities = 24/132 (18%), Positives = 50/132 (37%)
Query: 4 SKSATSTKDDMDEDIDENELSKIKEFLEEAEMETGADGTAEGEWXXXXXXXXXXXXXLYL 63
S S++S + ED D + S E +E + +++ E
Sbjct: 166 SSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSS 225
Query: 64 FARTGRDKHEWFRRLSTAIAEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVA 123
+ + + ++ S + +E+++ SDSS S + +KD + SE D+ +
Sbjct: 226 ESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSS 285
Query: 124 FAKTSPKSPSPD 135
+ S S +
Sbjct: 286 DSSDSESESSSE 297
Score = 30.7 bits (66), Expect = 0.44
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 364 STAIAEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGV 423
S + + + + S SS D +S ++E D + SE + +S+ SD+ SE
Sbjct: 135 SESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESS 194
Query: 424 TISSLGQTLPSDSEA 438
+ S + SDSE+
Sbjct: 195 SEDSDSSSSSSDSES 209
Score = 30.7 bits (66), Expect = 0.44
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 364 STAIAEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGV 423
S + + + + S SS D +S ++E D + SE + +S+ SD+ SE
Sbjct: 189 SESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESS 248
Query: 424 TISSLGQTLPSDSEA 438
+ S + SDSE+
Sbjct: 249 SEDSDSSSSSSDSES 263
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 364 STAIAEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGV 423
S + + + + S SS +S ++E+ D + SE + +S+ SD+ SE
Sbjct: 207 SESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESS 266
Query: 424 TISSLGQTLPSDSE 437
+ S + SDSE
Sbjct: 267 SKDSDSSSNSSDSE 280
Score = 27.9 bits (59), Expect = 3.1
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 364 STAIAEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGV 423
S + +E+++ SDSS S + +KD + SE D+ +S+ SD+ SE
Sbjct: 241 SDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDS-----SSDSSDSESESS 295
Query: 424 TISSLGQTLPSDSEA 438
+ S + SDS++
Sbjct: 296 SEDSDSTSSSSDSDS 310
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 364 STAIAEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGV 423
S + +E N +SS SS D +S ++E+ D + SE + +SN SD+ +
Sbjct: 227 SESSSEDNDSSSSSS--DSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSS 284
Query: 424 TISSLGQTLPSDSEA 438
+ SS ++ S ++
Sbjct: 285 SDSSDSESESSSEDS 299
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 351 MTPTPVQFEFRRLSTAIAEANAA--SSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVA 408
++PTP+ + FR L +A+ +S S D+S+ + + + +V S + +
Sbjct: 56 ISPTPISYSFRSLRRGHTSGHASEHTSSSRSSHDESDSMSSSSESDSDSVSSESNPKSYS 115
Query: 409 FAKTSNKSDTGSEG 422
+ TS+ + + G
Sbjct: 116 DSSTSSARSSSTSG 129
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 96 DDKSNDTNENKDGIELAV-----YKFSEKDTVAFAKTSPKSPSPDCE 137
DDK ++ + +K+ +E + Y S+K+ +T PK PSP+ E
Sbjct: 148 DDKLSEEDLSKEDLETTLKGDENYSSSQKEIYDNDETIPKPPSPEVE 194
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 83 AEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSPKSPSPD 135
A+ + S + D D+NE + + KF++K F + P S P+
Sbjct: 155 AKEPSPKSRKTDEDKHDKDSNEKIEDVNEKTIKFADKSQEEFNENGPPSGQPN 207
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 113 VYKFSEKDTVAFAKTSPKSPSPDCECRTLPAELTWVNT 150
V+ E D V+ A TS KS + R LPA L NT
Sbjct: 624 VHNNREDDEVSIASTSSKSNVEMEDTRLLPASLELANT 661
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 5.4
Identities = 20/89 (22%), Positives = 36/89 (40%)
Query: 354 TPVQFEFRRLSTAIAEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTS 413
TP ++ A +N+A+S S ++ T+ L+ S T + +S
Sbjct: 171 TPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASS 230
Query: 414 NKSDTGSEGVTISSLGQTLPSDSEAYEKN 442
+ + T S T SS+ T+ S + N
Sbjct: 231 SLNSTTSATATSSSISSTVSSSTPLTSSN 259
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 71 KHEWFRRLSTAIAEANAASSDSSGPDDKSNDTNENKDG 108
K E ++L E A D G D+ S++ E+ DG
Sbjct: 74 KREELQKLEAKYGEQMANGVDGEGSDESSSEEEEDSDG 111
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 359 EFRRLSTAIAEANAASSDSSGPDDKSNDTNENKDG 393
E ++L E A D G D+ S++ E+ DG
Sbjct: 77 ELQKLEAKYGEQMANGVDGEGSDESSSEEEEDSDG 111
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 292 DRVWIGFRTNPQLVLKARPAVGARTLRFTHISNWIEQKLSKEFE 335
DR ++ + ++VL G L F+ IS+ +++ L+KE++
Sbjct: 253 DRAYVKIEGDDEVVLLMNNLGGLSMLEFSAISHKVKEALAKEYK 296
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 84 EANAASSDSSGPDDKSNDTNENKDGIE 110
E+ +A+ D+ D K + E +DGIE
Sbjct: 17 ESESANGDTKQDDSKKSQVEEEEDGIE 43
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 369 EANAASSDSSGPDDKSNDTNENKDGIE 395
E+ +A+ D+ D K + E +DGIE
Sbjct: 17 ESESANGDTKQDDSKKSQVEEEEDGIE 43
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 84 EANAASSDSSGPDDKSNDTNENK 106
EA + SD G D++++ TNE+K
Sbjct: 368 EATDSRSDDEGEDEEASSTNEDK 390
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 369 EANAASSDSSGPDDKSNDTNENK 391
EA + SD G D++++ TNE+K
Sbjct: 368 EATDSRSDDEGEDEEASSTNEDK 390
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 73 EWFRRLSTAIAEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSPKSP 132
E RR + A + S + SN+ NEN A + FS K + A+ S ++
Sbjct: 927 EAMRREAEERRRAEEEEYERSQQESSSNEENENASRTSGARFSFSSKASRLSARPSARTV 986
Query: 133 SP 134
P
Sbjct: 987 PP 988
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.130 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,920,640
Number of Sequences: 5004
Number of extensions: 77305
Number of successful extensions: 265
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 236
Number of HSP's gapped (non-prelim): 28
length of query: 455
length of database: 2,362,478
effective HSP length: 75
effective length of query: 380
effective length of database: 1,987,178
effective search space: 755127640
effective search space used: 755127640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 55 (26.2 bits)
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