Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000175-TA|BGIBMGA000175-PA|undefined
(455 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical pr... 109 4e-24
U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical pr... 109 4e-24
AL033512-3|CAA22077.1| 243|Caenorhabditis elegans Hypothetical ... 36 0.078
U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore co... 31 1.3
U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical pr... 31 1.7
U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical pr... 30 2.9
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 30 3.9
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 30 3.9
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 30 3.9
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 30 3.9
AL132948-13|CAD31814.1| 283|Caenorhabditis elegans Hypothetical... 29 5.1
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 5.1
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 5.1
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 29 6.8
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 6.8
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 6.8
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 6.8
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z70684-6|CAA94595.1| 230|Caenorhabditis elegans Hypothetical pr... 29 9.0
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 9.0
>U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical
protein F55C12.5a protein.
Length = 876
Score = 109 bits (262), Expect = 4e-24
Identities = 49/121 (40%), Positives = 79/121 (65%)
Query: 236 LRMVDKIATNKYFQQVTDYKYVKRAMEGLSNTDIKLHLEIQGLEGRLSFNLPPPPHDRVW 295
L +V++ A + FQ+ + V R +E +S T + L++E++ +EG ++ N+PPPP DR+W
Sbjct: 749 LSIVERAAQSSLFQKAAKLQAVARLIEDVSTTPLMLNVEVEEVEGPMTCNIPPPPSDRLW 808
Query: 296 IGFRTNPQLVLKARPAVGARTLRFTHISNWIEQKLSKEFEKVLVLPNMEDIIIDIMTPTP 355
FR P L L+A P VG R++ + +S WIE KL + EK LV PNM+DII+ +++ P
Sbjct: 809 YAFRRRPILKLRAVPQVGDRSVDLSTVSEWIETKLRQVLEKNLVCPNMDDIILPVLSGNP 868
Query: 356 V 356
+
Sbjct: 869 L 869
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 15 DEDIDENELSKIKEFLEEAEMETGADGTAEGEWXXXXXXXXXXXXXLYLFARTGRDKHEW 74
DE+ D E +E A+ ++ + +YLF R R+K W
Sbjct: 400 DEETDGYTAESEAEVEDEKRKMVRANSASDIQEFRESNSHKKRGRSIYLFVRAAREKERW 459
Query: 75 FRRLSTAIAEA 85
F L A A A
Sbjct: 460 FHLLREACARA 470
>U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical
protein F55C12.5b protein.
Length = 925
Score = 109 bits (262), Expect = 4e-24
Identities = 49/121 (40%), Positives = 79/121 (65%)
Query: 236 LRMVDKIATNKYFQQVTDYKYVKRAMEGLSNTDIKLHLEIQGLEGRLSFNLPPPPHDRVW 295
L +V++ A + FQ+ + V R +E +S T + L++E++ +EG ++ N+PPPP DR+W
Sbjct: 798 LSIVERAAQSSLFQKAAKLQAVARLIEDVSTTPLMLNVEVEEVEGPMTCNIPPPPSDRLW 857
Query: 296 IGFRTNPQLVLKARPAVGARTLRFTHISNWIEQKLSKEFEKVLVLPNMEDIIIDIMTPTP 355
FR P L L+A P VG R++ + +S WIE KL + EK LV PNM+DII+ +++ P
Sbjct: 858 YAFRRRPILKLRAVPQVGDRSVDLSTVSEWIETKLRQVLEKNLVCPNMDDIILPVLSGNP 917
Query: 356 V 356
+
Sbjct: 918 L 918
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 15 DEDIDENELSKIKEFLEEAEMETGADGTAEGEWXXXXXXXXXXXXXLYLFARTGRDKHEW 74
DE+ D E +E A+ ++ + +YLF R R+K W
Sbjct: 449 DEETDGYTAESEAEVEDEKRKMVRANSASDIQEFRESNSHKKRGRSIYLFVRAAREKERW 508
Query: 75 FRRLSTAIAEA 85
F L A A A
Sbjct: 509 FHLLREACARA 519
>AL033512-3|CAA22077.1| 243|Caenorhabditis elegans Hypothetical
protein Y49A3A.4 protein.
Length = 243
Score = 35.5 bits (78), Expect = 0.078
Identities = 17/79 (21%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 314 ARTLRFTHISNWIEQKLSKEFEKVLVLPNMEDIIIDIMTPTP-VQFEFRRLSTAIAEANA 372
+R + +H+ + + +K ++ E++ ++ N+ D++ + TPT ++ + RR S I ++
Sbjct: 129 SREIHISHLKSKMGEKTVQKLEELKIVDNVIDLLRNATTPTTFMEKKPRRFSKRIENISS 188
Query: 373 ASSDSSGPDDKSNDTNENK 391
+D++ D+++D N+
Sbjct: 189 EMTDTAECVDRASDCERNQ 207
>U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore complex
protein protein6, isoform a protein.
Length = 1562
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 338 LVLPNMEDIIIDIMTPTPVQFEFRRLSTAIAEANAASSDSSGPDDKSNDTNENKDGIELA 397
LV P D +++T + E +L + ++ + + ++S PD+ SN T+ + G++L
Sbjct: 1198 LVFPEPSDDEDELITESDSSGENGKLPSGNKDSGSGTGNNSSPDN-SNGTSSSGTGVDLV 1256
Query: 398 VYKFSEKDTVAFAKTSNKSDT 418
K + +A+A S+ DT
Sbjct: 1257 ALKARQ---MAYALGSDDMDT 1274
>U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical
protein F55C12.5c protein.
Length = 543
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 15 DEDIDENELSKIKEFLEEAEMETGADGTAEGEWXXXXXXXXXXXXXLYLFARTGRDKHEW 74
DE+ D E +E A+ ++ + +YLF R R+K W
Sbjct: 449 DEETDGYTAESEAEVEDEKRKMVRANSASDIQEFRESNSHKKRGRSIYLFVRAAREKERW 508
Query: 75 FRRLSTAIAEA 85
F L A A A
Sbjct: 509 FHLLREACARA 519
>U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical
protein C10A4.5 protein.
Length = 368
Score = 30.3 bits (65), Expect = 2.9
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 309 RPAVGARTLRFTHISNWIEQKLSKEFEKVLVLPNMEDIIIDIMTPTPVQFEFRRL--STA 366
R A+ R R HI ++ + + +V PN+ ++ + + P E +
Sbjct: 178 RYAINKRNHRLMHIEPIVDD-IIRYRRRVQSEPNIPLVVNEEVELPPSYTEAIAMIEQAP 236
Query: 367 IAEANAASSDSSGP----DDKSNDTNENKDGIELAVYKFSEKDT 406
+ E+N AS +S P +++S++TNEN DG + K+T
Sbjct: 237 VQESNEASIESRDPIHSRNNRSSNTNENNDGNTNDQTDYENKET 280
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 5 KSATSTKDDMDEDIDENELSKIKEFLEEAEMETGADGTAE 44
++ T+T DD DE NE +IKE EE E + +AE
Sbjct: 768 ETETTTSDDNDETEASNESIEIKENSEEQETTLAHEDSAE 807
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 5 KSATSTKDDMDEDIDENELSKIKEFLEEAEMETGADGTAE 44
++ T+T DD DE NE +IKE EE E + +AE
Sbjct: 741 ETETTTSDDNDETEASNESIEIKENSEEQETTLAHEDSAE 780
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 5 KSATSTKDDMDEDIDENELSKIKEFLEEAEMETGADGTAE 44
++ T+T DD DE NE +IKE EE E + +AE
Sbjct: 741 ETETTTSDDNDETEASNESIEIKENSEEQETTLAHEDSAE 780
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 5 KSATSTKDDMDEDIDENELSKIKEFLEEAEMETGADGTAE 44
++ T+T DD DE NE +IKE EE E + +AE
Sbjct: 741 ETETTTSDDNDETEASNESIEIKENSEEQETTLAHEDSAE 780
>AL132948-13|CAD31814.1| 283|Caenorhabditis elegans Hypothetical
protein Y39B6A.16 protein.
Length = 283
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 338 LVLPNMEDIIIDIMTPTPVQFEFRRLSTAIAEANA-ASSDSSGPDDKSNDT 387
L P+M + D M TPVQ + RR + A A+A A A + + P K+ T
Sbjct: 176 LETPSMMRVFSDSMYETPVQIQ-RRFTKAQAKAEAEAEAPAKSPGSKAQTT 225
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 2 EVSKSATSTKDDMDEDIDENELSKIKEFLEEAEMETGADGTAEGE 46
E SK +T DED DE K K+ ++ + +T ++ + E E
Sbjct: 116 EKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESE 160
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 2 EVSKSATSTKDDMDEDIDENELSKIKEFLEEAEMETGADGTAEGE 46
E SK +T DED DE K K+ ++ + +T ++ + E E
Sbjct: 116 EKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESE 160
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 369 EANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISSL 428
E +SS +G D+SN +++D E +FS+ T + +TS+ + SE S
Sbjct: 232 EEGKSSSPGNGHRDESNGDKDHEDSSE----RFSQPSTSSHHETSHSPEKDSEAYQSRSF 287
Query: 429 GQ-TLPSDSEAYE 440
S S YE
Sbjct: 288 SPLNYQSQSPGYE 300
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 369 EANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISSL 428
E +SS +G D+SN +++D E +FS+ T + +TS+ + SE S
Sbjct: 523 EEGKSSSPGNGHRDESNGDKDHEDSSE----RFSQPSTSSHHETSHSPEKDSEAYQSRSF 578
Query: 429 GQ-TLPSDSEAYE 440
S S YE
Sbjct: 579 SPLNYQSQSPGYE 591
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 369 EANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISSL 428
E +SS +G D+SN +++D E +FS+ T + +TS+ + SE S
Sbjct: 538 EEGKSSSPGNGHRDESNGDKDHEDSSE----RFSQPSTSSHHETSHSPEKDSEAYQSRSF 593
Query: 429 GQ-TLPSDSEAYE 440
S S YE
Sbjct: 594 SPLNYQSQSPGYE 606
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 369 EANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISSL 428
E +SS +G D+SN +++D E +FS+ T + +TS+ + SE S
Sbjct: 538 EEGKSSSPGNGHRDESNGDKDHEDSSE----RFSQPSTSSHHETSHSPEKDSEAYQSRSF 593
Query: 429 GQ-TLPSDSEAYE 440
S S YE
Sbjct: 594 SPLNYQSQSPGYE 606
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 369 EANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISSL 428
E +SS +G D+SN +++D E +FS+ T + +TS+ + SE S
Sbjct: 232 EEGKSSSPGNGHRDESNGDKDHEDSSE----RFSQPSTSSHHETSHSPEKDSEAYQSRSF 287
Query: 429 GQ-TLPSDSEAYE 440
S S YE
Sbjct: 288 SPLNYQSQSPGYE 300
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 369 EANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISSL 428
E +SS +G D+SN +++D E +FS+ T + +TS+ + SE S
Sbjct: 523 EEGKSSSPGNGHRDESNGDKDHEDSSE----RFSQPSTSSHHETSHSPEKDSEAYQSRSF 578
Query: 429 GQ-TLPSDSEAYE 440
S S YE
Sbjct: 579 SPLNYQSQSPGYE 591
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 369 EANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISSL 428
E +SS +G D+SN +++D E +FS+ T + +TS+ + SE S
Sbjct: 538 EEGKSSSPGNGHRDESNGDKDHEDSSE----RFSQPSTSSHHETSHSPEKDSEAYQSRSF 593
Query: 429 GQ-TLPSDSEAYE 440
S S YE
Sbjct: 594 SPLNYQSQSPGYE 606
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 29.1 bits (62), Expect = 6.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 369 EANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISSL 428
E +SS +G D+SN +++D E +FS+ T + +TS+ + SE S
Sbjct: 538 EEGKSSSPGNGHRDESNGDKDHEDSSE----RFSQPSTSSHHETSHSPEKDSEAYQSRSF 593
Query: 429 GQ-TLPSDSEAYE 440
S S YE
Sbjct: 594 SPLNYQSQSPGYE 606
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.1 bits (62), Expect = 6.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 341 PNMEDIIIDIMTPTPVQFEFRRLSTAIAEANAASSDSSGPDDKSNDTNENKD 392
P++ED++ DI EFR+ S + E+ + DD+ N++ D
Sbjct: 314 PHLEDVVNDITENVDADGEFRKDSDSGIESGSTEEMRLNTDDEEMGINDSDD 365
>Z70684-6|CAA94595.1| 230|Caenorhabditis elegans Hypothetical
protein F28D1.6 protein.
Length = 230
Score = 28.7 bits (61), Expect = 9.0
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 357 QFEFRRLSTAIAEANAASSDSSGPDDKSNDTN----ENK--DGIELAVYKFSEKDTVAFA 410
+ F + + I A A SSDSS D ND + E K DG + A K EK
Sbjct: 53 KLSFLLILSLIVMAMADSSDSSDDDKHGNDEHSGDEEEKEHDGKDKATEKEKEKKETKLT 112
Query: 411 KTSNKSDTGSEGVTISSL 428
K+ + D +T S +
Sbjct: 113 KSEEEYDETQSKITGSDI 130
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.7 bits (61), Expect = 9.0
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 368 AEANAASSDSSGPDDKSNDTNENKDGIELAVYKFSEKDTVAFAKTSNKSDTGSEGVTISS 427
A +A S+ S+ PD SND ++ + K KD A NK S+G + SS
Sbjct: 235 APTSAVSTPSTAPD--SNDVSKKYK--KKKNKKSKSKDKKKTASKKNKKKKKSKGESASS 290
Query: 428 LGQTLPSDSE 437
QT P+D E
Sbjct: 291 TPQT-PNDPE 299
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.130 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,239,904
Number of Sequences: 27539
Number of extensions: 411579
Number of successful extensions: 1341
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1307
Number of HSP's gapped (non-prelim): 49
length of query: 455
length of database: 12,573,161
effective HSP length: 84
effective length of query: 371
effective length of database: 10,259,885
effective search space: 3806417335
effective search space used: 3806417335
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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