GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000173-TA|BGIBMGA000173-PA|IPR003123|Vacuolar sorting
protein 9, IPR002110|Ankyrin
         (896 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          43   3e-05
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    33   0.025
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    30   0.23 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    26   3.8  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    26   5.0  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 43.2 bits (97), Expect = 3e-05
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 14/144 (9%)

Query: 486 TSRDSHGLTALHVASIHGKATIVETLLEMGSEINAT--------DLNECSALHYASSRGH 537
           T+ +   L  LH A      TI   L+E+  E            D NE + LH A S   
Sbjct: 738 TAANQQQLNCLHAAIRRNDTTIACKLIELLHEYQLAEELLDLPNDRNE-TGLHLAVSCNS 796

Query: 538 QNVLLMLLHSGANINQKNIDKNTPLHLAVNNGHLHCVKAIIYFAEHSGRKININCANESG 597
           + ++  LL +GA ++  +   NTPLH AV       V+ ++      G  + ++C N+ G
Sbjct: 797 EPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLL---QGG--LRLDCTNDDG 851

Query: 598 NTPLHLASKWGYEGIARLLIEHGS 621
            T L  A       I R+L+E G+
Sbjct: 852 LTALQAAVYARNLKITRILLEAGA 875



 Score = 37.9 bits (84), Expect = 0.001
 Identities = 18/44 (40%), Positives = 25/44 (56%)

Query: 798 NKKAQTPLHLAAINNKTVVIRLLLDNGANINAIDVARNTPLHDA 841
           N + +T LHLA   N   +++ LL  GA ++  D   NTPLH A
Sbjct: 781 NDRNETGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRA 824



 Score = 34.7 bits (76), Expect = 0.011
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 2/119 (1%)

Query: 770 TALHYAARYGLDEFCNILIFNRANVNCRNKKAQTPLHLAAINNKTVVIR-LLLDNGANIN 828
           T LH A     +     L+   A ++  + +  TPLH A + N   ++R LLL  G  ++
Sbjct: 786 TGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRAVVENVPDMVRLLLLQGGLRLD 845

Query: 829 AIDVARNTPLHDASETGNIGAAKILLSYNPDITLLNATE-KTALAVAKDKVHLTIIDLI 886
             +    T L  A    N+   +ILL     +   +       L +A D   L I+  I
Sbjct: 846 CTNDDGLTALQAAVYARNLKITRILLEAGASVREKDLKHGNNILHIAVDNDALDIVHYI 904



 Score = 28.3 bits (60), Expect = 0.95
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 492 GLTALHVASIHGKATIVETLLEMGSEINATDLNE-CSALHYASSRGHQNVLLMLLHSGAN 550
           GLTAL  A       I   LLE G+ +   DL    + LH A      +++  +L     
Sbjct: 851 GLTALQAAVYARNLKITRILLEAGASVREKDLKHGNNILHIAVDNDALDIVHYILEEVKE 910

Query: 551 I--NQKNIDKNTPLHLAVNNGH 570
               ++N    TPL LA    H
Sbjct: 911 ELGRERNNAGYTPLQLADAKSH 932


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 33.5 bits (73), Expect = 0.025
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 771 ALHYAARYG-LDEFCNILIFNRANVNCRNKKAQTPLHLAAINNKTVVIRLLLDNGANINA 829
           AL  A  +G L++   IL     +VN  N    TPL +A ++N   + ++LL  GA  NA
Sbjct: 430 ALFSAVEHGHLEKARTILESTDVDVNSLNSDGLTPLDVAVLSNNRSMTKMLLQQGAIENA 489

Query: 830 IDV 832
             V
Sbjct: 490 HSV 492


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 30.3 bits (65), Expect = 0.23
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 770 TALHYAARYGLDEFCNILIFN-RANVNC--RNKKAQTPLHLAAI 810
           T LH+AAR+GL+  C  LI +    + C  RN   +TP  +A +
Sbjct: 556 TLLHFAARWGLERLCMQLIESPGGEIACEMRNINGRTPSDIAEL 599



 Score = 25.0 bits (52), Expect = 8.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query: 599 TPLHLASKWGYEGIARLLIE 618
           T LH A++WG E +   LIE
Sbjct: 556 TLLHFAARWGLERLCMQLIE 575


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 792 ANVNCRNKK---AQTPLHLAAINNKTVVIRLLLDNGANINAI 830
           A  NC  K    +   + +  +N++   +R LLDNG+ +N I
Sbjct: 429 AQANCSKKTVILSTAQIIILDVNDQPYKVRALLDNGSQLNFI 470


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 505 ATIVETLLEMGSEINATDLNECSALHYASS 534
           A ++ETL+E+G+E+  +  N  S   +A++
Sbjct: 60  AVLIETLIELGAEVQWSSCNIFSTQDHAAA 89


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.133    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 864,189
Number of Sequences: 2123
Number of extensions: 35833
Number of successful extensions: 120
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 105
Number of HSP's gapped (non-prelim): 13
length of query: 896
length of database: 516,269
effective HSP length: 70
effective length of query: 826
effective length of database: 367,659
effective search space: 303686334
effective search space used: 303686334
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)