Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000172-TA|BGIBMGA000172-PA|IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold
(285 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8UWC9 Cluster: Reverse transcriptase/ribonuclease H/pu... 73 6e-12
UniRef50_O96849 Cluster: Slime mold (D.discoideum) transposon DI... 65 2e-09
UniRef50_UPI0000F1DAE0 Cluster: PREDICTED: similar to reverse tr... 63 9e-09
UniRef50_UPI0000F20F15 Cluster: PREDICTED: similar to reverse tr... 60 6e-08
UniRef50_Q61RJ9 Cluster: Putative uncharacterized protein CBG065... 60 8e-08
UniRef50_UPI0000F209E0 Cluster: PREDICTED: similar to reverse tr... 53 1e-05
UniRef50_Q26106 Cluster: ORF2 protein; n=1; Panagrellus redivivu... 51 4e-05
UniRef50_UPI0000F1E075 Cluster: PREDICTED: similar to reverse tr... 44 0.004
UniRef50_UPI00015B4A40 Cluster: PREDICTED: similar to reverse tr... 40 0.096
UniRef50_UPI00015B52AC Cluster: PREDICTED: similar to tyrosine r... 38 0.22
UniRef50_A7S7J5 Cluster: Predicted protein; n=2; Nematostella ve... 38 0.22
UniRef50_UPI00015B4948 Cluster: PREDICTED: similar to tyrosine r... 38 0.39
UniRef50_A6QZZ1 Cluster: Predicted protein; n=1; Ajellomyces cap... 35 2.1
UniRef50_Q8L753 Cluster: Reverse transcriptase; n=1; Volvox cart... 35 2.7
UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG027... 35 2.7
UniRef50_A4IBB6 Cluster: Putative uncharacterized protein; n=3; ... 35 2.7
UniRef50_UPI00015B44B6 Cluster: PREDICTED: similar to reverse tr... 33 6.3
UniRef50_UPI00015B4B76 Cluster: PREDICTED: similar to tyrosine r... 33 8.3
UniRef50_Q2UTI4 Cluster: Predicted protein; n=11; Pezizomycotina... 33 8.3
>UniRef50_Q8UWC9 Cluster: Reverse transcriptase/ribonuclease
H/putative methyltransferase; n=1; Tetraodon
nigroviridis|Rep: Reverse transcriptase/ribonuclease
H/putative methyltransferase - Tetraodon nigroviridis
(Green puffer)
Length = 785
Score = 73.3 bits (172), Expect = 6e-12
Identities = 59/206 (28%), Positives = 82/206 (39%), Gaps = 6/206 (2%)
Query: 62 SDNRTVVSYIKNEGGTRSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTEADHLSR-NR 120
+DN +VV+YI +GGTRS+Q N AD LSR N
Sbjct: 581 TDNSSVVAYINRQGGTRSQQLHELARRLVLWSSSRLLSLRATHVAGVLNRGADLLSRGNP 640
Query: 121 GGSEWHLTEEATTRLFNLWGTPDVDLFASR-TAHVVTNYVTQDLLDSNAYFH-DAFSRSW 178
EW L + +++ +G VDLFAS+ AH + L + +A DA + W
Sbjct: 641 LYGEWRLHPQVVAQIWQRYGKAAVDLFASQENAHCPLFF---SLAEGSAPLGVDALAHPW 697
Query: 179 HYRLAWLFPPPSLIPRVLDHLNSASGRYILVAPKWKKPFWRPDLKTRALRRPVKLRDLST 238
L + FPP SLI L + ILVAP+W W ++ + P L
Sbjct: 698 PDVLLYAFPPLSLISPTLARVREQGLSLILVAPRWPSKHWIAEIVQLLMAEPWPLPCRRD 757
Query: 239 SLVDTMTMLPPAHVSNLHLEAWLILG 264
L + L L AW + G
Sbjct: 758 LLSQARGEIFHPRPDRLSLWAWPVRG 783
>UniRef50_O96849 Cluster: Slime mold (D.discoideum) transposon
DIRS-1, complete, clone SB41; n=5; Dictyostelium
discoideum|Rep: Slime mold (D.discoideum) transposon
DIRS-1, complete, clone SB41 - Dictyostelium discoideum
(Slime mold)
Length = 608
Score = 65.3 bits (152), Expect = 2e-09
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 62 SDNRTVVSYIKNEGGTRSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTEADHLSR--- 118
+DN T +SYI +GG + + +N +ADHLSR
Sbjct: 392 TDNTTTLSYINRQGG-QIQDLSVLFEQLWKQCLKKKVNLIGEHIPGFFNVKADHLSRLSE 450
Query: 119 -NRGGS-------EWHLTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYF 170
N S W L +E R+ +G +DLFAS H TNY T + N
Sbjct: 451 MNHKSSTRVIKSYNWQLKKEVFNRIQLQFGQIQMDLFASHLNHQTTNYST---IRMNT-L 506
Query: 171 HDAFSRSWHYRLAWLFPPPSLIPRVLDHLNSASGR---YILVAPKWKKPFWRPDLKTRAL 227
H +S+ W LA FPPP L+P +L+ +NS+S + IL+ P W+ W P ++ +
Sbjct: 507 HLDWSQ-WKQCLA--FPPPILLPSILEKMNSSSSKKVSIILIFPIWRSATWYPMIQAQVP 563
Query: 228 R 228
R
Sbjct: 564 R 564
>UniRef50_UPI0000F1DAE0 Cluster: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase;
n=5; Danio rerio|Rep: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase
- Danio rerio
Length = 915
Score = 62.9 bits (146), Expect = 9e-09
Identities = 48/165 (29%), Positives = 66/165 (40%), Gaps = 9/165 (5%)
Query: 62 SDNRTVVSYIKNEGGTRSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTEADHLSRNR- 120
+DN +VVSYI ++GG SR N AD LSR
Sbjct: 711 TDNTSVVSYINHQGGLNSRPLCRLANQIHLWAQGRLLSLKAAYIPGPMNVGADLLSRQGL 770
Query: 121 --GGSEWHLTEEATTRLFNLWGTPDVDLFA-SRTAHVVTNYVTQDLLDSNAYFHDAFSRS 177
GG W L + ++ +G DVDLFA +T H + DA ++
Sbjct: 771 EPGG--WRLHPKVLAAIWQRFGRADVDLFACQKTTHCPLWFSQTHPAPLGL---DAMVQT 825
Query: 178 WHYRLAWLFPPPSLIPRVLDHLNSASGRYILVAPKWKKPFWRPDL 222
W + FPP +L+P VL+ + +LVAP W W DL
Sbjct: 826 WPRLRLYAFPPIALLPGVLERVRQGGYNLLLVAPYWPTRVWFSDL 870
>UniRef50_UPI0000F20F15 Cluster: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase;
n=4; Danio rerio|Rep: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase
- Danio rerio
Length = 892
Score = 60.1 bits (139), Expect = 6e-08
Identities = 56/202 (27%), Positives = 79/202 (39%), Gaps = 11/202 (5%)
Query: 62 SDNRTVVSYIKNEGGTRSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTEADHLSRN-- 119
+D+ +YI GG RSR+ N AD LSR
Sbjct: 675 TDSTAAAAYINRMGGMRSRRMSQLARRLLLWSHPRLKSLRAIHVPGTLNRAADALSRQLL 734
Query: 120 RGGSEWHLTEEATTRLFNLWGTPDVDLFAS-RTAHVVTNYVTQDLLDSNAYFHDAFSRSW 178
R G EW L E+ ++ +G +DLFAS AH + L + DA + SW
Sbjct: 735 RPG-EWRLHPESVQLIWARFGEAQIDLFASPENAHCQLFFS----LTEGSLGTDALAHSW 789
Query: 179 HYRLA-WLFPPPSLIPRVLDHLNSASGRYILVAPKWKKPFWRPDLKTRALRRP--VKLRD 235
+ + FPP SL+ + L + + +LVAP W W +L A P + LR+
Sbjct: 790 PRGMRKYAFPPVSLLTQFLCKVREDEEQVLLVAPLWPNRTWISELSLLATALPWRIPLRE 849
Query: 236 LSTSLVDTMTMLPPAHVSNLHL 257
S P + NLHL
Sbjct: 850 DLLSQGQGTIWHPRPDLWNLHL 871
>UniRef50_Q61RJ9 Cluster: Putative uncharacterized protein CBG06557;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG06557 - Caenorhabditis
briggsae
Length = 994
Score = 59.7 bits (138), Expect = 8e-08
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 110 NTEADHLSRNRGGSEWHLTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQ--DLLDSN 167
N EAD SRN +W + E + +WG VD FA Y ++ + S
Sbjct: 368 NVEADEASRNFDFDDWGIAERVFSHAQRMWGEIKVDWFADANNKKTELYFSRYPEFGTSG 427
Query: 168 AYFHDAFSRSWHYRLAWLFPPPSLIPRVLDHLNSASGRYILVAPKWK 214
+ R+ L WL PPP LIP+++ + R +LVAP WK
Sbjct: 428 VNVFEHVERAERMGLPWLVPPPVLIPQLIKIMRRRRLRGVLVAPLWK 474
>UniRef50_UPI0000F209E0 Cluster: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase;
n=1; Danio rerio|Rep: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase
- Danio rerio
Length = 1047
Score = 52.8 bits (121), Expect = 1e-05
Identities = 53/200 (26%), Positives = 78/200 (39%), Gaps = 9/200 (4%)
Query: 62 SDNRTVVSYIKNEGGTRSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTEADHLSRNR- 120
+D+ +Y+ G TRSR+ N AD LSR +
Sbjct: 792 TDSMPAAAYVNRTGDTRSRRMSQLVRRLLLWSHPQQKSLRVFHIPGMLNHAADALSRQQI 851
Query: 121 GGSEWHLTEEATTRLFNLWGTPDVDLFAS-RTAHVVTNYVTQDLLDSNAYFHDAFSRSWH 179
E L E+ ++ +G +DLFAS AH + L + DA + SW
Sbjct: 852 HFGERRLHPESVQLIWARFGEAQIDLFASPENAHCQLFFS----LTEGSLGTDALAHSWP 907
Query: 180 YRLAWLFPPPSLIPRVLDHLNSASGRYILVAPKWKKPFWRPDLKTRALRRP--VKLRDLS 237
R FPP SL+ ++L + + +LVAP W W +L A P V LR+
Sbjct: 908 -RGTRKFPPVSLLAQLLCKVREDEEQVLLVAPPWPNRTWISELSLLATALPWRVPLREDL 966
Query: 238 TSLVDTMTMLPPAHVSNLHL 257
S P ++ NLH+
Sbjct: 967 LSQGQGTIWHPRPNLWNLHI 986
>UniRef50_Q26106 Cluster: ORF2 protein; n=1; Panagrellus
redivivus|Rep: ORF2 protein - Panagrellus redivivus
Length = 588
Score = 50.8 bits (116), Expect = 4e-05
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 110 NTEADHLSRNRGGSEWHLTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAY 169
N+ AD SR +W +++E +L + D FAS + ++++ +A
Sbjct: 425 NSAADRASRETDPDDWAISKEIFEKLTAKFQKCQCDRFASHKTKQLDKFMSRVPCPGSAG 484
Query: 170 FHDAFSRSWHYRLAWLFPPPSLIPRVLDHLNSASGRYILVAPKW 213
+ AF+ W +W PPP+L+ R H+ S + +LV+P W
Sbjct: 485 VN-AFAYQWTDWSSWCVPPPALLVRTWKHIESHACEGLLVSPDW 527
>UniRef50_UPI0000F1E075 Cluster: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase;
n=1; Danio rerio|Rep: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase
- Danio rerio
Length = 349
Score = 44.0 bits (99), Expect = 0.004
Identities = 51/203 (25%), Positives = 72/203 (35%), Gaps = 11/203 (5%)
Query: 63 DNRTVVSYIKNEGGTRSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTEADHLSRNR-G 121
D+ ++YI G RSR+ N A LSR+
Sbjct: 127 DSMVTMAYINRMVGIRSRRMSQLAHRLLLWSHTRLKSMRAIHIPGKLNCAAHALSRHLVS 186
Query: 122 GSEWHLTEEATTRLFNLWGTPDVDLFAS-RTAHVVTNYVTQDLLDSNAYFHDAFSRSWHY 180
EW L ++ + +G +DLFAS AH Y L D + SW
Sbjct: 187 QGEWRLHPDSVQLIRARFGEAQIDLFASTENAHCQLFYS----LTKAPLSMDVLAHSWPS 242
Query: 181 RLA-WLFPPPSLIPRVLDHLNSASGRYILVAPKWKKPFWRPDLKTRALRRPVKLRDLSTS 239
+ F P SLI + L + +++ VAP W W +L A P + LS +
Sbjct: 243 GMRKCAFLPVSLIAQTLCKVREDEEQFLFVAPLWSNRTWVSELTLFAAAPPWRNSPLSET 302
Query: 240 ---LVDTMTML-PPAHVSNLHLE 258
L T L PP V +E
Sbjct: 303 GHHLASTPRSLEPPGMVHRRSVE 325
>UniRef50_UPI00015B4A40 Cluster: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
reverse transcriptase/ribonuclease H/putative
methyltransferase - Nasonia vitripennis
Length = 585
Score = 39.5 bits (88), Expect = 0.096
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Query: 63 DNRTVVSYIKNEGGTRSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTEADHLSRN-RG 121
DN T ++YI G + N EAD SR
Sbjct: 415 DNTTAIAYINRMGSIQFEDLNSLTQQIWQWCEDREIWIFASYIKSRDNFEADSESRKLEP 474
Query: 122 GSEWHLTEEATTRLFNLWGTPDVDLFASRTAH 153
+E+ L+ A + ++G PD+DLFASR+ H
Sbjct: 475 ETEYELSNSAFDEIVQVFGAPDIDLFASRSNH 506
>UniRef50_UPI00015B52AC Cluster: PREDICTED: similar to tyrosine
recombinase; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to tyrosine recombinase - Nasonia vitripennis
Length = 389
Score = 38.3 bits (85), Expect = 0.22
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 172 DAFSRSWHYRLAWLFPPPSLIPRVLDHLNSASGRYILVAPKWKKPFWRPDLK 223
+AF+ +W+ + + FPP +L+ + L + IL+ P W W P+ K
Sbjct: 2 NAFTINWNNKFWYAFPPFALLTKTLKKIRDDKAEGILIVPHWPGQPWFPEFK 53
>UniRef50_A7S7J5 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 360
Score = 38.3 bits (85), Expect = 0.22
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 165 DSNAYFHDAFSRSWHYRLAWLFPPPSLIPRVLDHLNSASGRYILVAPKWKKP 216
D AY +AF SW + F P +I +VL ++ ILVAP W P
Sbjct: 185 DPGAYAVNAFHTSWKNLCFYAFSPFGIIQKVLSKISEDQATGILVAPHWPTP 236
>UniRef50_UPI00015B4948 Cluster: PREDICTED: similar to tyrosine
recombinase; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to tyrosine recombinase - Nasonia vitripennis
Length = 1054
Score = 37.5 bits (83), Expect = 0.39
Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Query: 63 DNRTVVSYIKNEGGTRSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTEADHLSR-NRG 121
DN T ++YI GG + ++ N AD SR
Sbjct: 452 DNITALAYINKMGGIKHKELHALTKVIWEWCIEREIWIFAEYIASKENI-ADEGSRITNV 510
Query: 122 GSEWHLTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQD 162
+EW L A ++ +G P +DLFASR H Y + D
Sbjct: 511 DTEWELANFAFQKIVKEFGYPSIDLFASRVNHKCKRYCSWD 551
>UniRef50_A6QZZ1 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 536
Score = 35.1 bits (77), Expect = 2.1
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 208 LVAPKWKKPFWRPDLKTRALRRPVKLRDLSTSLVDTMTMLPPAHVSNLHLEAWLILGKYE 267
++AP+ ++P+ P LKTR P +L +L +SL PP +S+ G E
Sbjct: 275 IIAPEARRPWPLPRLKTRNADSPARLTELESSL--RAGESPPTEISDSRAATPSETG--E 330
Query: 268 LKSTNFATTPERGNKR 283
L + +T P RG R
Sbjct: 331 LSAGPLSTLPSRGRGR 346
>UniRef50_Q8L753 Cluster: Reverse transcriptase; n=1; Volvox carteri
f. nagariensis|Rep: Reverse transcriptase - Volvox
carteri f. nagariensis
Length = 829
Score = 34.7 bits (76), Expect = 2.7
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 18/139 (12%)
Query: 112 EADHLSRNRGGSEWHLTEEATTRLFN---LWG-TPDVDLFA-SRTAHVVTNYVTQDLLDS 166
+AD LS+ GS+W L +L+ + G +P +D+FA + T V ++ +
Sbjct: 658 QADALSKYEDGSQWMLNPTVYAKLWEHPCVHGRSPSLDVFADAHTTKVPGSFFAANWCPG 717
Query: 167 ----NAYFHDAFSRSWHYR--------LAWLFPPPSLIPRVLDHLNSASGRYILVAPKWK 214
+A+ D S W R L ++ PP S + RVL + +L+ P W
Sbjct: 718 VKGVDAFAQDWGSPGWGRRDGGETVRPLLYINPPFSAVARVLRKVAEERPDCVLILPVWP 777
Query: 215 KPFWRPDLKTRALRRPVKL 233
+ W L+T +R + L
Sbjct: 778 RA-WVAILRTLPIRAQMTL 795
>UniRef50_Q620M3 Cluster: Putative uncharacterized protein CBG02733;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG02733 - Caenorhabditis
briggsae
Length = 1157
Score = 34.7 bits (76), Expect = 2.7
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 201 SASGRYILVAPKWKKPFWRPDLKTRALRRPVKLRDLSTSLVDTMTML---PPAHVSNLHL 257
+ SGRY + PK P++ R + RP +R S++++ ++ P H+S LH
Sbjct: 935 TVSGRYRKMPPKMHLTVLEPEVP-RVVYRPRPVRSRSSTIISIYSIPIDDEPTHLSELHA 993
Query: 258 EAWLILGKYELKSTNFAT 275
E +I+G E++ T
Sbjct: 994 EKRMIVGIDEIEKPENVT 1011
>UniRef50_A4IBB6 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania infantum
Length = 534
Score = 34.7 bits (76), Expect = 2.7
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 120 RGGSEWHLTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFHD-AFSRSW 178
RGG HLT +T RL +L+ S HV + +L SN + H+ F W
Sbjct: 185 RGGGGGHLTSASTARLPSLY---------SPLEHVSPGSLDLIVLPSNVFAHEMLFDAPW 235
Query: 179 HYRLAWLFPPPSLIPRVLDHLNSASGRYILVAPKW 213
H LA P + +L H+ A + AP+W
Sbjct: 236 HLSLAHRALRPHGVVAILGHVAEAG----VGAPEW 266
>UniRef50_UPI00015B44B6 Cluster: PREDICTED: similar to reverse
transcriptase/ribonuclease H/putative methyltransferase,
partial; n=2; Nasonia vitripennis|Rep: PREDICTED:
similar to reverse transcriptase/ribonuclease H/putative
methyltransferase, partial - Nasonia vitripennis
Length = 787
Score = 33.5 bits (73), Expect = 6.3
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 123 SEWHLTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFHDAFSRSWHYRL 182
+EW L +A + +G P++DLFA+R+ Y + D A +AF+ SW R+
Sbjct: 576 TEWKLAIKAFNLVEQEFGHPEIDLFATRSNTKCNTYCSWQ-RDPGALAINAFTISWSNRI 634
>UniRef50_UPI00015B4B76 Cluster: PREDICTED: similar to tyrosine
recombinase; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to tyrosine recombinase - Nasonia vitripennis
Length = 858
Score = 33.1 bits (72), Expect = 8.3
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 113 ADHLSR-NRGGSEWHLTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFH 171
AD SR G +EW L +A + +G P++ LFA+R+ Y + D A
Sbjct: 473 ADKESRITNGDTEWELAIKAFNLVEQEFGHPEIYLFATRSNTKCNTYCSWQ-RDPGALAI 531
Query: 172 DAFSRSWHYR 181
+AF+ SW R
Sbjct: 532 NAFTISWSNR 541
>UniRef50_Q2UTI4 Cluster: Predicted protein; n=11;
Pezizomycotina|Rep: Predicted protein - Aspergillus
oryzae
Length = 331
Score = 33.1 bits (72), Expect = 8.3
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Query: 229 RPVKLRDLSTSL----VDTMTMLPPAHVSNLHLEAWLI 262
RP +LRD+ +SL DTM ++PPAH + A LI
Sbjct: 61 RPGRLRDMVSSLQEVGADTMCLIPPAHTEKFDITAELI 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.319 0.133 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,678,129
Number of Sequences: 1657284
Number of extensions: 9674333
Number of successful extensions: 18810
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 18784
Number of HSP's gapped (non-prelim): 21
length of query: 285
length of database: 575,637,011
effective HSP length: 100
effective length of query: 185
effective length of database: 409,908,611
effective search space: 75833093035
effective search space used: 75833093035
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 72 (33.1 bits)
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