Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000172-TA|BGIBMGA000172-PA|IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold
(285 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010125-1|AAQ22594.1| 539|Drosophila melanogaster AT16378p pro... 31 2.4
BT001770-1|AAN71525.1| 305|Drosophila melanogaster RH11619p pro... 30 4.2
AY060998-1|AAL28546.1| 556|Drosophila melanogaster HL01494p pro... 30 4.2
AE014296-542|AAS64951.1| 384|Drosophila melanogaster CG1271-PC,... 30 4.2
AE014296-541|AAN12228.1| 406|Drosophila melanogaster CG1271-PB,... 30 4.2
AE014296-540|AAN12227.1| 539|Drosophila melanogaster CG1271-PD,... 30 4.2
AE014296-539|AAF47707.2| 556|Drosophila melanogaster CG1271-PA,... 30 4.2
D16401-1|BAA21836.1| 817|Drosophila melanogaster Dret protein. 29 5.5
AY061231-1|AAL28779.1| 281|Drosophila melanogaster LD17515p pro... 29 5.5
AJ237973-1|CAB96180.1| 1235|Drosophila melanogaster receptor tyr... 29 5.5
AF322653-1|AAK01656.1| 1235|Drosophila melanogaster tyrosine kin... 29 5.5
AF322652-1|AAK01655.1| 1235|Drosophila melanogaster tyrosine kin... 29 5.5
AE014134-3361|AAN11103.1| 1237|Drosophila melanogaster CG14396-P... 29 5.5
AE014134-3360|AAN11102.1| 1235|Drosophila melanogaster CG14396-P... 29 5.5
AE014134-3359|AAN11101.1| 1235|Drosophila melanogaster CG14396-P... 29 5.5
AE014134-3358|AAF53978.2| 1235|Drosophila melanogaster CG14396-P... 29 5.5
AE014134-3357|AAF53977.3| 1235|Drosophila melanogaster CG14396-P... 29 5.5
>BT010125-1|AAQ22594.1| 539|Drosophila melanogaster AT16378p
protein.
Length = 539
Score = 30.7 bits (66), Expect = 2.4
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 127 LTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFHDAFSRSWHYRLAWLF 186
L ++A L + W + +SR + ++T + +D F+ SW ++WLF
Sbjct: 182 LQKKARVELLDSWILHKLRTGSSRDKDL--EHITDVTSSTATGLYDPFTLSWSPLISWLF 239
Query: 187 PPPS-LIPRVLDHLNSASGRYILVA--PKW 213
S ++PRV+D+ S G A P W
Sbjct: 240 GINSKILPRVVDNGYSGFGHVHPTAFGPDW 269
>BT001770-1|AAN71525.1| 305|Drosophila melanogaster RH11619p
protein.
Length = 305
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 127 LTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFHDAFSRSWHYRLAWLF 186
+ ++A L + W + +SR V ++T + +D F+ SW ++WLF
Sbjct: 49 MQKKARVELLDSWILHKLRTGSSRDKDV--EHITDVTSSTATGLYDPFTLSWSPLISWLF 106
Query: 187 PPPS-LIPRVLDH 198
S ++PRV+D+
Sbjct: 107 GINSKILPRVVDN 119
>AY060998-1|AAL28546.1| 556|Drosophila melanogaster HL01494p
protein.
Length = 556
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 127 LTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFHDAFSRSWHYRLAWLF 186
+ ++A L + W + +SR V ++T + +D F+ SW ++WLF
Sbjct: 199 MQKKARVELLDSWILHKLRTGSSRDKDV--EHITDVTSSTATGLYDPFTLSWSPLISWLF 256
Query: 187 PPPS-LIPRVLDH 198
S ++PRV+D+
Sbjct: 257 GINSKILPRVVDN 269
>AE014296-542|AAS64951.1| 384|Drosophila melanogaster CG1271-PC,
isoform C protein.
Length = 384
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 127 LTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFHDAFSRSWHYRLAWLF 186
+ ++A L + W + +SR V ++T + +D F+ SW ++WLF
Sbjct: 49 MQKKARVELLDSWILHKLRTGSSRDKDV--EHITDVTSSTATGLYDPFTLSWSPLISWLF 106
Query: 187 PPPS-LIPRVLDH 198
S ++PRV+D+
Sbjct: 107 GINSKILPRVVDN 119
>AE014296-541|AAN12228.1| 406|Drosophila melanogaster CG1271-PB,
isoform B protein.
Length = 406
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 127 LTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFHDAFSRSWHYRLAWLF 186
+ ++A L + W + +SR V ++T + +D F+ SW ++WLF
Sbjct: 49 MQKKARVELLDSWILHKLRTGSSRDKDV--EHITDVTSSTATGLYDPFTLSWSPLISWLF 106
Query: 187 PPPS-LIPRVLDH 198
S ++PRV+D+
Sbjct: 107 GINSKILPRVVDN 119
>AE014296-540|AAN12227.1| 539|Drosophila melanogaster CG1271-PD,
isoform D protein.
Length = 539
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 127 LTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFHDAFSRSWHYRLAWLF 186
+ ++A L + W + +SR V ++T + +D F+ SW ++WLF
Sbjct: 182 MQKKARVELLDSWILHKLRTGSSRDKDV--EHITDVTSSTATGLYDPFTLSWSPLISWLF 239
Query: 187 PPPS-LIPRVLDH 198
S ++PRV+D+
Sbjct: 240 GINSKILPRVVDN 252
>AE014296-539|AAF47707.2| 556|Drosophila melanogaster CG1271-PA,
isoform A protein.
Length = 556
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 127 LTEEATTRLFNLWGTPDVDLFASRTAHVVTNYVTQDLLDSNAYFHDAFSRSWHYRLAWLF 186
+ ++A L + W + +SR V ++T + +D F+ SW ++WLF
Sbjct: 199 MQKKARVELLDSWILHKLRTGSSRDKDV--EHITDVTSSTATGLYDPFTLSWSPLISWLF 256
Query: 187 PPPS-LIPRVLDH 198
S ++PRV+D+
Sbjct: 257 GINSKILPRVVDN 269
>D16401-1|BAA21836.1| 817|Drosophila melanogaster Dret protein.
Length = 817
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 724 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 783
>AY061231-1|AAL28779.1| 281|Drosophila melanogaster LD17515p
protein.
Length = 281
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 188 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 247
>AJ237973-1|CAB96180.1| 1235|Drosophila melanogaster receptor tyrosine
kinase protein.
Length = 1235
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 1142 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 1201
>AF322653-1|AAK01656.1| 1235|Drosophila melanogaster tyrosine kinase
Ret isoform 2 protein.
Length = 1235
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 1142 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 1201
>AF322652-1|AAK01655.1| 1235|Drosophila melanogaster tyrosine kinase
Ret isoform 1 protein.
Length = 1235
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 1142 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 1201
>AE014134-3361|AAN11103.1| 1237|Drosophila melanogaster CG14396-PD,
isoform D protein.
Length = 1237
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 1144 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 1203
>AE014134-3360|AAN11102.1| 1235|Drosophila melanogaster CG14396-PE,
isoform E protein.
Length = 1235
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 1142 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 1201
>AE014134-3359|AAN11101.1| 1235|Drosophila melanogaster CG14396-PC,
isoform C protein.
Length = 1235
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 1142 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 1201
>AE014134-3358|AAF53978.2| 1235|Drosophila melanogaster CG14396-PB,
isoform B protein.
Length = 1235
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 1142 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 1201
>AE014134-3357|AAF53977.3| 1235|Drosophila melanogaster CG14396-PA,
isoform A protein.
Length = 1235
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 227 LRRPVKLRDLS-TSLVDTMTMLPPAHVSNLHLEAWLILGKYELKSTNFATTPERGNKRQF 285
LR P+ +R S T MT PPA S H + G+ L TN + P+ + R+F
Sbjct: 1142 LRFPLNIRKSSCTPSYSNMTSEPPATTSLPHYSVPVKRGRSYLDMTNKSLIPDNLDSREF 1201
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.319 0.133 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,986,388
Number of Sequences: 52641
Number of extensions: 424865
Number of successful extensions: 709
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 709
Number of HSP's gapped (non-prelim): 17
length of query: 285
length of database: 24,830,863
effective HSP length: 84
effective length of query: 201
effective length of database: 20,409,019
effective search space: 4102212819
effective search space used: 4102212819
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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