GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000171-TA|BGIBMGA000171-PA|undefined
         (97 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   1.00 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   2.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   5.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    19   9.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    19   9.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    19   9.3  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    19   9.3  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 1.00
 Identities = 5/21 (23%), Positives = 13/21 (61%)

Query: 40  IFTESAECHTDDELLDLCQRC 60
           +  +  +  +D++ +D+C RC
Sbjct: 218 VVKDKKKSRSDEQTIDICMRC 238


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
          protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 2.3
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 11 LMFLMALFLCIALVRTATSRPPWLAPGSQIFTESAECHTDDELLDLCQR 59
          + F   LFLC+A +      P + A  + I     E    D + D+C+R
Sbjct: 1  MQFKPILFLCLATLALGQKDPHFAADRNSI-VHLFEWKWSD-IADVCER 47


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 19.8 bits (39), Expect = 5.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 50  DDELLDLCQRCAKLTKSKLAYPAC 73
           +DE  ++     KL++S+L   AC
Sbjct: 387 EDERNEIISSALKLSQSELEITAC 410


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 9   RNLMFLMALFLCIALV 24
           R L  L+A+F+ +AL+
Sbjct: 151 RRLNVLLAVFMSLALI 166


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 9   RNLMFLMALFLCIALV 24
           R L  L+A+F+ +AL+
Sbjct: 151 RRLNVLLAVFMSLALI 166


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 9   RNLMFLMALFLCIALV 24
           R L  L+A+F+ +AL+
Sbjct: 151 RRLNVLLAVFMSLALI 166


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.0 bits (37), Expect = 9.3
 Identities = 6/16 (37%), Positives = 9/16 (56%)

Query: 5   FVLWRNLMFLMALFLC 20
           F+LW  +     +FLC
Sbjct: 251 FILWHIVGTFSGIFLC 266


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.330    0.138    0.474 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,340
Number of Sequences: 317
Number of extensions: 757
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 97
length of database: 114,650
effective HSP length: 48
effective length of query: 49
effective length of database: 99,434
effective search space:  4872266
effective search space used:  4872266
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.5 bits)
S2: 37 (19.0 bits)