Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000170-TA|BGIBMGA000170-PA|IPR011709|Protein of unknown
function DUF1605
(160 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 7e-04
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 33 0.15
SB_44294| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_19311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_15717| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 30 0.78
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 29 1.8
SB_484| Best HMM Match : bZIP_1 (HMM E-Value=1.4) 29 1.8
SB_49925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_1648| Best HMM Match : UPF0061 (HMM E-Value=5.2e-10) 29 2.4
SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32) 28 3.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 28 4.2
SB_22366| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_16514| Best HMM Match : Paxillin (HMM E-Value=3.7) 27 7.3
SB_32302| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2) 27 9.6
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 62.5 bits (145), Expect = 2e-10
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 27 KQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFE-GPDLGTAKCERVMKCVLSG 85
K WC + +N RV++ DIR L +I +E K+ G D T + +C+ G
Sbjct: 560 KSWCAEHFINTRVMKLVMDIRKQLREIC---IRLEIKLQSCGKDSATLR-----QCLCRG 611
Query: 86 YFPQAARLTPAGAYRGLRGAD-LALSPDSCLYAAPPPQWVTFASVQCSRDRTYMRDVMPI 144
F +A L G Y+ L + +A+ P S L+ + P V V S+ YMRDV +
Sbjct: 612 LFMNSAELQLDGTYQTLNHRETVAIHPSSSLFMSKPAYVVYNELVHTSK--CYMRDVSVV 669
Query: 145 DRSWLLELAPHYYKE 159
WLLE AP +++E
Sbjct: 670 SCDWLLEAAPGFFQE 684
>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 28 QWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMKCVLSGYF 87
QWC + HR +++A D+R+ LE +++ E ++ P TA + K V +G+F
Sbjct: 550 QWCYENFIQHRSMKRARDVREQLEGLIE---RAEIEMSSNPGDFTA----IRKAVTAGFF 602
Query: 88 PQAARLTPAGAYRGLRGADLA 108
ARL G YR ++ +A
Sbjct: 603 YHTARLGRGGQYRTVKHQQMA 623
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 40.3 bits (90), Expect = 7e-04
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 21 KSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMK 80
K+ + WC + R L +A DIR + K+ + V G TA RV K
Sbjct: 804 KNNKFSNAWCFENFVQARSLRRAQDIRKQIHKL--------DVVSCGKH--TA---RVQK 850
Query: 81 CVLSGYFPQAARLTPAGAYRGLRGADLA-LSPDSCLYAAPPPQWVTFASVQCSRDRTYMR 139
+ SG+F AAR P YR + + + P S L+ P+WV + + + + YMR
Sbjct: 851 AITSGFFRNAARKDPQEGYRTVVDNQVVYIHPSSALFNR-QPEWVVYHELVLT-TKEYMR 908
Query: 140 DVM 142
+V+
Sbjct: 909 EVV 911
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 32.7 bits (71), Expect = 0.15
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 97 GAYRGLR-GADLALSPDSCLYAAP-PPQWVTFASVQCSRDRTYMRDVMPIDRSWLLELAP 154
G Y +R G L P S L+ P ++ + + + + YM+ V +D +WL EL P
Sbjct: 1063 GEYVNMRTGMPCHLHPTSALFGMGYTPDYIVYHELVMT-SKEYMQCVTAVDGNWLAELGP 1121
Query: 155 HYY 157
+Y
Sbjct: 1122 MFY 1124
>SB_44294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 30.7 bits (66), Expect = 0.59
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 28 QWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCE-RVMKCVLSGY 86
QWC + HR ++ A ++R L +I+ +FN++ + D + + K ++SG+
Sbjct: 6 QWCYDNFIQHRSMKSADNVRGQLARIM-DRFNLQRR---STDFNSRDYYLNIRKALVSGF 61
Query: 87 FPQ 89
F Q
Sbjct: 62 FMQ 64
>SB_19311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 30.7 bits (66), Expect = 0.59
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 28 QWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCE-RVMKCVLSGY 86
QWC + HR ++ A ++R L +I+ +FN++ + D + + K ++SG+
Sbjct: 28 QWCYDNFIQHRSMKSADNVRGQLARIM-DRFNLQRR---STDFNSRDYYLNIRKALVSGF 83
Query: 87 FPQ 89
F Q
Sbjct: 84 FMQ 86
>SB_15717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 273
Score = 30.7 bits (66), Expect = 0.59
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 28 QWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCE-RVMKCVLSGY 86
QWC + HR ++ A ++R L +I+ +FN++ + D + + K ++SG+
Sbjct: 213 QWCYDNFIQHRSMKSADNVRGQLARIM-DRFNLQRR---STDFNSRDYYLNIRKALVSGF 268
Query: 87 FPQ 89
F Q
Sbjct: 269 FMQ 271
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 30.3 bits (65), Expect = 0.78
Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 28 QWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIEN-KVFEGPDLGTAKC-ERVMKCVLSG 85
+WC LN + L A D L+ ++ +I+N + ++ L A E + K V+S
Sbjct: 1192 RWCFEKSLNAKALRLAEDTMRDLKFSLEHDLSIKNARTWKWSPLDDAVVNETLQKIVMSC 1251
Query: 86 YFPQAARLTPAG--AYRGL-RGADLALSPDSCL-YAAPPPQWVTF-ASVQCSRDRTYMRD 140
+ + Y+ L G + L P S + + P+++ + +++ ++D ++ +
Sbjct: 1252 FSENLCVFSGHSRVGYKNLYDGEYVQLHPSSAINFIGTEPKFLVYEKTLRTTQD--FIIN 1309
Query: 141 VMPIDRSWLLE 151
V PI+ +WLL+
Sbjct: 1310 VTPIEEAWLLD 1320
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 10 LRVRSSCEDKRKSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPD 69
+ V + D R S +AC+ + LN++ E EK +KG I + + PD
Sbjct: 44 ISVNETSIDLRTSLQACQDDGLAFLLNYQYQEARRLGHIKKEKKLKGLLEIHSHLLLKPD 103
Query: 70 LGTAK 74
+G AK
Sbjct: 104 VGNAK 108
>SB_484| Best HMM Match : bZIP_1 (HMM E-Value=1.4)
Length = 263
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 10 LRVRSSCEDKRKSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPD 69
+ V + D R S +AC+ + LN++ E EK +KG I + + PD
Sbjct: 44 ISVNETSIDLRTSLQACQDDGLAFLLNYQYQEARRLGHIKKEKKLKGLLEIHSHLLLKPD 103
Query: 70 LGTAK 74
+G AK
Sbjct: 104 VGNAK 108
>SB_49925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 11 RVRSSCEDKRKSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIEN 62
R+ KR S + + Q+++L+H + + D+++ +I KF + N
Sbjct: 29 RITQMSNSKRPSPKEQIWYAQKFKLSHNLEDYLTDVKNIDHRIALTKFRLSN 80
>SB_1648| Best HMM Match : UPF0061 (HMM E-Value=5.2e-10)
Length = 371
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 116 YAAPPPQWVTFASVQCS 132
YAAPPP W T V CS
Sbjct: 354 YAAPPPPWSTKLRVSCS 370
>SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32)
Length = 1039
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 14 SSCEDKRKSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKG 56
+ C+DKR ER C Q LN++ +E+A +I E IVKG
Sbjct: 860 ADCDDKR-DERNCIPANQIAGLNNKAIEEAKNILQ--ESIVKG 899
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 5 IFDSYLRVRSSCEDKRKSERACKQWCQRYRLNHRVLEKAADIRDSLE-KIVKGKFNIENK 63
I D ++R + EDK + E + + + H +EKA + RD E ++++ K N++
Sbjct: 2707 IEDEVKKLRETVEDKEELEEILGEMRDKRKRLHDDIEKALNERDDFEDELLELKKNVKLD 2766
Query: 64 VFEGPDL 70
EG DL
Sbjct: 2767 K-EGTDL 2772
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 18 DKRKSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAK 74
D R S +AC+ + LN++ E EK +KG I + + PD+G AK
Sbjct: 52 DLRTSLQACQDDGLDFLLNYQYQEARRLGHIKKEKKLKGLLEIHSHLLLKPDVGNAK 108
>SB_22366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 8 SYLRVRSSCEDKRKSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFE 66
+Y+ ++K + AC Q C RYR + K+ ++ D L K+ + +F +++K+FE
Sbjct: 71 AYIEKADHQQEKMEKAAACIQSCWRYRQFVKRHMKSLELGDWL-KLQRMRF-LQHKLFE 127
>SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 98 AYRGLRGADLALSPDSCLYAAP-PPQWVTFASVQCSRDRTYMR 139
AY +R AD+ +SP++ +Y P P T +S+ +M+
Sbjct: 166 AYSSVRSADMLVSPNAHIYGGPMDPSTPTTSSMSAFASSQHMQ 208
>SB_16514| Best HMM Match : Paxillin (HMM E-Value=3.7)
Length = 311
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 74 KCERVMKCVLSGYFPQAARLTPAGA-YRGLRGADLALSPDSCLYAAPPPQWVTFASVQCS 132
+ E ++ ++S F QA + G Y GL LSP+ + QW F S Q S
Sbjct: 11 EAEFKLQSLISPEFHQAREVLRQGRPYNGLEMN--TLSPEQVAFVQGTAQWPKFFSPQAS 68
Query: 133 RDRT 136
R T
Sbjct: 69 RSPT 72
>SB_32302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 55 KGKFNIENKVFEGPDLGTAKCERVMKCVLSGYFPQAARLTP 95
KG I+ K L K +V K V+S FP A ++TP
Sbjct: 95 KGNLTIQRKPLYS--LNGIKMSKVFKAVVSRPFPSADKMTP 133
>SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2)
Length = 2527
Score = 26.6 bits (56), Expect = 9.6
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 90 AARLTPAGAYRGLRGADLALSPDSCLYAAPPPQWVTFASVQCSRDRTYMRD 140
+A LT G+ G D+ P A PPPQ V V+C T RD
Sbjct: 705 SAPLTRNAEGEGVEGEDVEEDPP----AVPPPQPVPLTRVKCLVSMTTPRD 751
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.136 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,810,189
Number of Sequences: 59808
Number of extensions: 223770
Number of successful extensions: 463
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 454
Number of HSP's gapped (non-prelim): 21
length of query: 160
length of database: 16,821,457
effective HSP length: 77
effective length of query: 83
effective length of database: 12,216,241
effective search space: 1013948003
effective search space used: 1013948003
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 56 (26.6 bits)
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