GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000170-TA|BGIBMGA000170-PA|IPR011709|Protein of unknown
function DUF1605
         (160 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    22   8.1  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    22   8.1  

>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
          polypeptide protein.
          Length = 121

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 6/16 (37%), Positives = 13/16 (81%)

Query: 15 SCEDKRKSERACKQWC 30
          +C ++RK++ AC++ C
Sbjct: 78 TCTNQRKNDSACRRSC 93


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 6   FDSYLRVRSSCE---DKRKSERACKQWCQRYRLNHRVLEKAAD 45
           +  Y+ +R   E   + + SER  K W Q  R   R  +K A+
Sbjct: 236 YTRYITIRRKAELAQNLQLSERQVKIWFQNRRAKDRKQKKKAE 278


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.136    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,918
Number of Sequences: 2123
Number of extensions: 6719
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 160
length of database: 516,269
effective HSP length: 59
effective length of query: 101
effective length of database: 391,012
effective search space: 39492212
effective search space used: 39492212
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)