BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000170-TA|BGIBMGA000170-PA|IPR011709|Protein of unknown
function DUF1605
(160 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81462-6|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 74 6e-14
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 74 6e-14
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 74 6e-14
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 72 2e-13
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 63 1e-10
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 63 1e-10
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 55 2e-08
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 55 2e-08
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 54 6e-08
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 37 0.008
AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical ... 31 0.39
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 29 2.1
Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical pr... 28 2.7
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z72502-2|CAA96585.2| 430|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 27 6.3
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 27 8.4
>Z81462-6|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 73.7 bits (173), Expect = 6e-14
Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 27 KQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMKCVLSGY 86
++WC + HR +++A D+RD L +++ + IE K + ++ K + +GY
Sbjct: 861 QRWCVENYVQHRTMKRARDVRDQLVGLLE-RVEIETK-------SSTDTIKIRKAITAGY 912
Query: 87 FPQAARLTPAGAYRGLRGADLALS-PDSCLYAAPPPQWVTFASVQCSRDRTYMRDVMPID 145
F ++L G Y+ ++ P+SCL+ P +WV + + + + +MR++ I+
Sbjct: 913 FYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETP-RWVVYFELVFT-SKEFMREMSEIE 970
Query: 146 RSWLLELAPHYYK 158
WLLE+APHYYK
Sbjct: 971 SGWLLEVAPHYYK 983
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 73.7 bits (173), Expect = 6e-14
Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 27 KQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMKCVLSGY 86
++WC + HR +++A D+RD L +++ + IE K + ++ K + +GY
Sbjct: 861 QRWCVENYVQHRTMKRARDVRDQLVGLLE-RVEIETK-------SSTDTIKIRKAITAGY 912
Query: 87 FPQAARLTPAGAYRGLRGADLALS-PDSCLYAAPPPQWVTFASVQCSRDRTYMRDVMPID 145
F ++L G Y+ ++ P+SCL+ P +WV + + + + +MR++ I+
Sbjct: 913 FYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETP-RWVVYFELVFT-SKEFMREMSEIE 970
Query: 146 RSWLLELAPHYYK 158
WLLE+APHYYK
Sbjct: 971 SGWLLEVAPHYYK 983
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 73.7 bits (173), Expect = 6e-14
Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 27 KQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMKCVLSGY 86
++WC + HR +++A D+RD L +++ + IE K + ++ K + +GY
Sbjct: 861 QRWCVENYVQHRTMKRARDVRDQLVGLLE-RVEIETK-------SSTDTIKIRKAITAGY 912
Query: 87 FPQAARLTPAGAYRGLRGADLALS-PDSCLYAAPPPQWVTFASVQCSRDRTYMRDVMPID 145
F ++L G Y+ ++ P+SCL+ P +WV + + + + +MR++ I+
Sbjct: 913 FYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETP-RWVVYFELVFT-SKEFMREMSEIE 970
Query: 146 RSWLLELAPHYYK 158
WLLE+APHYYK
Sbjct: 971 SGWLLEVAPHYYK 983
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 71.7 bits (168), Expect = 2e-13
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 27 KQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKC-ERVMKCVLSG 85
K+WC + +N+R L +A ++R L +++K +F IE KV G C E + +C+++G
Sbjct: 581 KKWCSDHFVNYRGLMRADNVRSQLVRLLK-RFEIE-KV---SSRGLINCSENIRQCLVTG 635
Query: 86 YFPQAARLTPAGAYRGLRGADL--ALSPDSCLYAAPPPQWVTFASVQCSRDRTYMRDVMP 143
+F QAA+ G Y ++ + S ++ P+WV F V + +RDV
Sbjct: 636 FFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVM----QDSIRDVTV 691
Query: 144 IDRSWLLELAPHYYK 158
I+ WL ELAPHYY+
Sbjct: 692 IEPEWLYELAPHYYE 706
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 62.9 bits (146), Expect = 1e-10
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 21 KSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMK 80
K+ + WC + R +++A DIR L I+ + V G D+ RV K
Sbjct: 1028 KNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLL--MVSCGRDVS-----RVQK 1080
Query: 81 CVLSGYFPQAARLTPAGAYRGLR-GADLALSPDSCLYAAPPPQWVTFASVQCSRDRTYMR 139
+ SG+F AA+ P YR L G ++ + P S + P +WV + + + + YMR
Sbjct: 1081 AICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQP-EWVVYHELVMTT-KEYMR 1138
Query: 140 DVMPIDRSWLLELAPHYYK 158
+V ID WL+E AP ++K
Sbjct: 1139 EVTAIDPKWLVEFAPSFFK 1157
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 62.9 bits (146), Expect = 1e-10
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 21 KSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMK 80
K+ + WC + R +++A DIR L I+ + V G D+ RV K
Sbjct: 1028 KNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLL--MVSCGRDVS-----RVQK 1080
Query: 81 CVLSGYFPQAARLTPAGAYRGLR-GADLALSPDSCLYAAPPPQWVTFASVQCSRDRTYMR 139
+ SG+F AA+ P YR L G ++ + P S + P +WV + + + + YMR
Sbjct: 1081 AICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQP-EWVVYHELVMTT-KEYMR 1138
Query: 140 DVMPIDRSWLLELAPHYYK 158
+V ID WL+E AP ++K
Sbjct: 1139 EVTAIDPKWLVEFAPSFFK 1157
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 55.2 bits (127), Expect = 2e-08
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 21 KSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMK 80
++ + +WC L+ + L+K ++R L++I++ +++ + ++ + V K
Sbjct: 929 RTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQ---DLKLPLISNG----SEWDIVRK 981
Query: 81 CVLSGYFPQAARLTPAGAYRGLR-GADLALSPDSCLYAAP-PPQWVTFASVQCSRDRTYM 138
C+ S YF AARL G Y +R G L P S L+ P +V + + + + YM
Sbjct: 982 CICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTA-KEYM 1040
Query: 139 RDVMPIDRSWLLELAPHYY 157
+ V +D WL EL P +Y
Sbjct: 1041 QCVTAVDAIWLAELGPMFY 1059
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 55.2 bits (127), Expect = 2e-08
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 21 KSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMK 80
++ + +WC L+ + L+K ++R L++I++ +++ + ++ + V K
Sbjct: 929 RTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQ---DLKLPLISNG----SEWDIVRK 981
Query: 81 CVLSGYFPQAARLTPAGAYRGLR-GADLALSPDSCLYAAP-PPQWVTFASVQCSRDRTYM 138
C+ S YF AARL G Y +R G L P S L+ P +V + + + + YM
Sbjct: 982 CICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTA-KEYM 1040
Query: 139 RDVMPIDRSWLLELAPHYY 157
+ V +D WL EL P +Y
Sbjct: 1041 QCVTAVDAIWLAELGPMFY 1059
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 53.6 bits (123), Expect = 6e-08
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 21 KSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIE--NKVFEGPDLGTAKCERV 78
K + QWC +N+R ++ A +R L +++ K+N+ + F+ D +
Sbjct: 579 KQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMD-KYNLRRVSTDFKSRDYYL----NI 633
Query: 79 MKCVLSGYFPQAARLTPAGAYRGLRGADLA-LSPDSCLYAAPPPQWVTFASVQCSRDRTY 137
K +++G+F Q A L +G Y ++ L L P + L P+W + + + +
Sbjct: 634 RKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL--DHKPEWALYNEFVLTT-KNF 690
Query: 138 MRDVMPIDRSWLLELAPHYY 157
+R V + WLL++AP YY
Sbjct: 691 IRTVTDVRPEWLLQIAPQYY 710
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 36.7 bits (81), Expect = 0.008
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 21 KSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIE--NKVFEGPDLGTAKCERV 78
K + QWC +N+R ++ A +R L +++ K+N+ + F+ D +
Sbjct: 579 KQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVM-DKYNLRRVSTDFKSRDYYL----NI 633
Query: 79 MKCVLSGYFPQAARLTPAGAYRGLRGADLA-LSPDSCLYAAPPPQWVTF 126
K +++G+F Q A L +G Y ++ L L P + L P+W +
Sbjct: 634 RKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVL--DHKPEWALY 680
>AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical
protein Y108F1.5 protein.
Length = 330
Score = 31.1 bits (67), Expect = 0.39
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 27 KQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIE 61
K+WC + +N+R L +A ++R L +++K +F IE
Sbjct: 107 KKWCSDHFVNYRGLMRADNVRSQLVRLLK-RFEIE 140
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
protein W05B2.4 protein.
Length = 2265
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 21 KSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVK 55
++E+ K WC+ + RV RD+L+KI+K
Sbjct: 826 RAEKILKAWCETQQKWMRVANIFVTCRDTLQKIIK 860
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 41 EKAADIRDSLEKIVKGKFNIENKVFEGPDLGTAKCERVMKCVLSGYFPQAARLTPAGAYR 100
E A ++ +EK V G EN +GP + ++ E +MK + SG + A+L G
Sbjct: 354 EFVAKAKELVEKTVIGDPFDENTT-QGPQIDESQVETIMKYIESGK-KEGAQLVTGGVKH 411
Query: 101 GLRG 104
G +G
Sbjct: 412 GDQG 415
>Z81581-2|CAD56595.1| 672|Caenorhabditis elegans Hypothetical
protein F08A10.1c protein.
Length = 672
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 85 GYFPQAARLTPAGAYRGLRGADLALSPDSCLYAAPPPQW 123
G+ A TP AY G G A+SP S P +W
Sbjct: 88 GHIQLTANGTPVFAYSGGGGGSCAVSPSSSARREDPSKW 126
>Z81581-1|CAD56594.1| 655|Caenorhabditis elegans Hypothetical
protein F08A10.1b protein.
Length = 655
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 85 GYFPQAARLTPAGAYRGLRGADLALSPDSCLYAAPPPQW 123
G+ A TP AY G G A+SP S P +W
Sbjct: 88 GHIQLTANGTPVFAYSGGGGGSCAVSPSSSARREDPSKW 126
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 28.3 bits (60), Expect = 2.7
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 14/140 (10%)
Query: 30 CQRYRLNHRVLEKAADIRDSLEKIVKGKFNIENKVFEGPDLGTA---KCERVMKCVLSGY 86
C++ L + L +A +R L IV E+ DL + + + + V++ +
Sbjct: 852 CEKVGLRVKALVEARKLRQQLTNIVNASCKKEHAAALDSDLPPPTDQQAQLLRQMVVASF 911
Query: 87 FPQAARLTPA---------GAYRG-LRGADLALSPDSCLYAAPPPQWVTFASVQCSRDRT 136
+ AR GAY L + + P S ++ P ++V + + ++
Sbjct: 912 SDRLARRVDRSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEP-EFVIYQELVQVNEKK 970
Query: 137 YMRDVMPIDRSWLLELAPHY 156
M V +D+ WL LA Y
Sbjct: 971 LMTSVCAVDKEWLSRLAESY 990
>Z72502-2|CAA96585.2| 430|Caenorhabditis elegans Hypothetical
protein C08B6.2 protein.
Length = 430
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 2 YLNIFDSYLRVRSSCEDKRKSERACKQWCQRYRLNHRVLEKAADIR 47
YLN + ++ +S E ++ SE+ K C+R + RV E DI+
Sbjct: 246 YLN--EKRVKANASVEKEKFSEKETKNECKRTNTDSRVNESVDDIK 289
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 27.1 bits (57), Expect = 6.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 88 PQAARLTPAGAYRGLRGADLAL 109
P+ R+ PAG YRG++G + +
Sbjct: 149 PEVYRVDPAGYYRGMKGVSVGV 170
>Z48055-9|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 17 EDKRKSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIEN 62
E+KR+ ++ + N ++L +A D + LE++ KGK I++
Sbjct: 469 EEKRRRKKQDADVTRLDEQNQKLLREAQDSAELLEEVQKGKREIDH 514
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 17 EDKRKSERACKQWCQRYRLNHRVLEKAADIRDSLEKIVKGKFNIEN 62
E+KR+ ++ + N ++L +A D + LE++ KGK I++
Sbjct: 469 EEKRRRKKQDADVTRLDEQNQKLLREAQDSAELLEEVQKGKREIDH 514
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 26.6 bits (56), Expect = 8.4
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 67 GPDLGTAKCERVMKCVLSGYFPQ---AARLTPAGAYRGLRGADLALSPDSCLYAAPPP 121
GPD A C + + +G +P+ AA PAG Y G GA +P + AAP P
Sbjct: 292 GPD--AAYCPCPPRTLGAGAYPEGGDAAAAAPAGGYDGGAGAAPEAAPAAA--AAPQP 345
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.136 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,232,432
Number of Sequences: 27539
Number of extensions: 165632
Number of successful extensions: 421
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 388
Number of HSP's gapped (non-prelim): 22
length of query: 160
length of database: 12,573,161
effective HSP length: 76
effective length of query: 84
effective length of database: 10,480,197
effective search space: 880336548
effective search space used: 880336548
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 56 (26.6 bits)
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