Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000169-TA|BGIBMGA000169-PA|IPR000276|Rhodopsin-like GPCR
superfamily
         (371 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    27   0.22 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    27   0.22 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    27   0.22 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   8.1  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 57  RLRALSYEDVVWIPCSVNPLCHPTVKALMVDHINHYIYGPLCAILDKALRISDRMLFLTP 116
           R+  LS  D++    +     + T    M+ +I   +YG    I+D  +R S + + L  
Sbjct: 228 RVLWLSLSDLLQKMGNAYARTYSTYSLFMMANITVAVYGFTSEIVDHGIRFSFKEIGLLV 287

Query: 117 NTISCAHVFIAMIGANLLTCPNLSVRRMGIVLFQIRM 153
           ++  C  +       +     N++ RR+ + L Q+ +
Sbjct: 288 DSTYCLFLLFVFCDCSHQASLNIA-RRVQVTLLQVNL 323


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 57  RLRALSYEDVVWIPCSVNPLCHPTVKALMVDHINHYIYGPLCAILDKALRISDRMLFLTP 116
           R+  LS  D++    +     + T    M+ +I   +YG    I+D  +R S + + L  
Sbjct: 228 RVLWLSLSDLLQKMGNAYARTYSTYSLFMMANITVAVYGFTSEIVDHGIRFSFKEIGLLV 287

Query: 117 NTISCAHVFIAMIGANLLTCPNLSVRRMGIVLFQIRM 153
           ++  C  +       +     N++ RR+ + L Q+ +
Sbjct: 288 DSTYCLFLLFVFCDCSHQASLNIA-RRVQVTLLQVNL 323


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 27.1 bits (57), Expect = 0.22
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 57  RLRALSYEDVVWIPCSVNPLCHPTVKALMVDHINHYIYGPLCAILDKALRISDRMLFLTP 116
           R+  LS  D++    +     + T    M+ +I   +YG    I+D  +R S + + L  
Sbjct: 228 RVLWLSLSDLLQKMGNAYARTYSTYSLFMMANITVAVYGFTSEIVDHGIRFSFKEIGLLV 287

Query: 117 NTISCAHVFIAMIGANLLTCPNLSVRRMGIVLFQIRM 153
           ++  C  +       +     N++ RR+ + L Q+ +
Sbjct: 288 DSTYCLFLLFVFCDCSHQASLNIA-RRVQVTLLQVNL 323


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 246 YKTKVSLKAI--IQVIILFSGQMVLSSVAWNRYINVYQEMFENGNGYLAGRLV 296
           Y   V+ K I  +QV++ ++   VL +++ +RY  +   M  +G+   A  L+
Sbjct: 91  YAGNVACKVIRFLQVVVTYASTYVLVALSIDRYDAIRHPMKFSGSWKRARYLI 143


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.141    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,645
Number of Sequences: 317
Number of extensions: 3208
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 4
length of query: 371
length of database: 114,650
effective HSP length: 58
effective length of query: 313
effective length of database: 96,264
effective search space: 30130632
effective search space used: 30130632
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 44 (21.8 bits)