BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000169-TA|BGIBMGA000169-PA|IPR000276|Rhodopsin-like GPCR superfamily (371 letters) Database: mosquito 2123 sequences; 516,269 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 26 1.9 DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 26 1.9 AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 25 4.4 >DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein 183 protein. Length = 315 Score = 25.8 bits (54), Expect = 1.9 Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 216 SASALPYYQLKEMNAAENMEKDHASDVGISYKTKVS 251 S SAL Q + NA + + G+SYK+K S Sbjct: 49 STSALRKKQARSSNADSSHSSEEEESAGLSYKSKRS 84 >DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein 183 protein. Length = 315 Score = 25.8 bits (54), Expect = 1.9 Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 216 SASALPYYQLKEMNAAENMEKDHASDVGISYKTKVS 251 S SAL Q + NA + + G+SYK+K S Sbjct: 49 STSALRKKQARSSNADSSHSSEEEESAGLSYKSKRS 84 >AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion protein protein. Length = 1881 Score = 24.6 bits (51), Expect = 4.4 Identities = 10/22 (45%), Positives = 13/22 (59%) Query: 205 QYPPRRGYRGTSASALPYYQLK 226 QY R+G+ G A+ YQLK Sbjct: 1843 QYEARKGFAGAEANNAANYQLK 1864 Database: mosquito Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 516,269 Number of sequences in database: 2123 Lambda K H 0.328 0.141 0.439 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 336,528 Number of Sequences: 2123 Number of extensions: 12737 Number of successful extensions: 27 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24 Number of HSP's gapped (non-prelim): 3 length of query: 371 length of database: 516,269 effective HSP length: 65 effective length of query: 306 effective length of database: 378,274 effective search space: 115751844 effective search space used: 115751844 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.8 bits) S2: 49 (23.8 bits)
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