GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000169-TA|BGIBMGA000169-PA|IPR000276|Rhodopsin-like GPCR
superfamily
         (371 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    26   1.9  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    26   1.9  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   4.4  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 216 SASALPYYQLKEMNAAENMEKDHASDVGISYKTKVS 251
           S SAL   Q +  NA  +   +     G+SYK+K S
Sbjct: 49  STSALRKKQARSSNADSSHSSEEEESAGLSYKSKRS 84


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 216 SASALPYYQLKEMNAAENMEKDHASDVGISYKTKVS 251
           S SAL   Q +  NA  +   +     G+SYK+K S
Sbjct: 49  STSALRKKQARSSNADSSHSSEEEESAGLSYKSKRS 84


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 205  QYPPRRGYRGTSASALPYYQLK 226
            QY  R+G+ G  A+    YQLK
Sbjct: 1843 QYEARKGFAGAEANNAANYQLK 1864


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.141    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,528
Number of Sequences: 2123
Number of extensions: 12737
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 3
length of query: 371
length of database: 516,269
effective HSP length: 65
effective length of query: 306
effective length of database: 378,274
effective search space: 115751844
effective search space used: 115751844
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 49 (23.8 bits)