Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000168-TA|BGIBMGA000168-PA|undefined
(693 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 45 4e-05
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 38 0.006
SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyce... 34 0.076
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.23
SPAC227.07c |pab1||protein phosphatase regulatory subunit Pab1|S... 32 0.31
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 31 0.54
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 30 0.94
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 30 0.94
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 29 1.6
SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces pombe... 29 1.6
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 29 1.6
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 29 2.9
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 28 3.8
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 28 3.8
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 28 5.0
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 27 8.7
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 338 MHPKQVNADQDLLKFGNDNNLPLISNKQNQPIGSLVFKNTPNTLTDKPVLEDFEQYLKVV 397
M P+Q N + + + ++SN +N+P S VF N P + +P+L++F + V
Sbjct: 462 MMPQQSNNSEASIPSTTPQSPSVVSNGENKPSSSPVFFNGPVSSEKEPILDNFNVFKNVG 521
Query: 398 NNLNKAQTIDKPVENVET-KAIPNELQKNGAGN 429
A+ IDKP T PN LQ+ A +
Sbjct: 522 EEHQGAEQIDKPFSCPPTWNTGPNSLQQTIANS 554
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 37.5 bits (83), Expect = 0.006
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 170 FNNLFDTNDNINSDNLKQLNDFIIQ-QSHVKSTSSIDQSGNIVYKVENPEAIQIISEILN 228
F++ TN+++ + + + D ++ QSHV S + S V K +P +I S LN
Sbjct: 602 FSSNLATNEDVTNSGMPDIADVSLKSQSHVPPRISSNHSDTSV-KSNSPSSIFDNSGYLN 660
Query: 229 AVLMKLFDLHKNIANGPVSHD-FNVNKIQQN 258
++ + +H+N+ N ++D + + +Q+N
Sbjct: 661 SLNNSILQMHQNLQNSSNTNDQYKFDSVQEN 691
>SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 663
Score = 33.9 bits (74), Expect = 0.076
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 387 LEDFEQYLKVVNNLNKAQTIDKPVENVETKAIPNELQKNGAGNGILELLSKSP 439
+ED E +L+V + +A TI+K V + E +I + NGI E +S SP
Sbjct: 392 VEDNEDFLRVAGSWRRASTIEKGVSSSELSSIVSSTGSIVETNGIGEKMSFSP 444
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 32.3 bits (70), Expect = 0.23
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 17/236 (7%)
Query: 279 LSQDNLTNKKDSLINIFGNKIESPE-NNHAFSKTI--LFNKYMQKTPEVNPITNAL--AD 333
L D++T +KD LIN +I+S E N + TI NK K N + NA D
Sbjct: 534 LKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKD 593
Query: 334 YNLKMHPKQVNADQDLLKFGNDN----NLPLISNKQNQPIGSLVFKNTPNTLTDKPVLED 389
+L+ + +N QD K N NL + S ++ + ++ L+ D
Sbjct: 594 NDLRRFHESINKLQDREKELTSNLEKKNLVISSLRETVAMLEKERESIKKYLSGNAKDLD 653
Query: 390 FEQYLKVVNNLNKAQTIDKPVENVETKAIPNELQKNGAGNGILELLSKSPYWXXXXXXXX 449
++++N +K + + + +V+ + +E ++ A I+ S +
Sbjct: 654 NTNLMEILN--DKISVLQRQLTDVKDELDVSEEEREEA---IVAGQKLSASFELMSNEKQ 708
Query: 450 XXXVPYPSFNNNLLQLQTI---KNTDQNKMNMETIQHXXXXXXXXXDAMKNKDIFV 502
+ Y S N L+ Q + + + ++++ + + D KNK+I V
Sbjct: 709 ALELKYSSLKNELINAQNLLDRREEELSELSKKLFEERKIRSGSNDDIEKNKEINV 764
Score = 30.7 bits (66), Expect = 0.71
Identities = 72/348 (20%), Positives = 144/348 (41%), Gaps = 35/348 (10%)
Query: 49 DAQEMLRKLTTDKKYRFSSLQPIPKEGEFQVLNTRITDNEPNSKIGCRDAL---KLMTEF 105
+ E+ +KL ++K R S I K E VLN+ + D + D + KL+
Sbjct: 734 ELSELSKKLFEERKIRSGSNDDIEKNKEINVLNSELADKLAQIRHLESDKMELDKLVHHL 793
Query: 106 KMSTELINHICQNE-------LXXXXXXXIDSTKNINLMETGFTQR-GSVRKLPDEVVKN 157
E N I +N L + + ++ +E Q+ ++R L E +++
Sbjct: 794 NRGIEEAN-IEENAVKKRLCLLMGCDYSSVSILQIVSQIEHFVNQQIQTIRSLKQE-LRH 851
Query: 158 IIISFYNFKPKAFNNLF-------DTNDNI----NSDNLKQLNDFIIQQSHVKSTSSIDQ 206
+ F K + + F +T +I N + +++ND ++ + K SS D+
Sbjct: 852 DFVQFSGKKEQELSRSFEKFGLGTETKHDILAQRNRNVSEKMND--LENAAQKFFSSPDR 909
Query: 207 SGNIVYKVENPEAIQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKY 266
+Y E+ I+ + + + + + L D KN N + + NK +E++K
Sbjct: 910 KNGYLYPSEHTSKIEYLEKTIEDLKLALQDELKN-RNLLMDDISSYNKQTTKLQEKIKWL 968
Query: 267 LSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFSKTI-LFNKYMQKTPEVN 325
+ ++ I+ + N N +++L+ +K E E K + ++N + K E+
Sbjct: 969 ERERSILIDELESYRSNQFNYQNNLVQ---DKNELEERLKEIQKELEVYNNHFMKQAEL- 1024
Query: 326 PITNALADYNLKMHPKQVNADQDLLKFGNDNNLPLISNKQNQPIGSLV 373
+T+ + D + M A Q K N ++L I + + SL+
Sbjct: 1025 -MTSNVTDESQLMLKTLREALQS--KTNNIDHLSTILERNRKEYKSLL 1069
>SPAC227.07c |pab1||protein phosphatase regulatory subunit
Pab1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 247 SHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLS 280
+H +++N I N++ E Y+S D++ INL+NLS
Sbjct: 174 AHAYHINSISVNSDAET--YISADDLRINLWNLS 205
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 31.1 bits (67), Expect = 0.54
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 348 DLLKFGNDNNLPLISNKQNQPIGSLVFKNTPNTLTDKPVLEDFEQYLKVVNNLNKAQTID 407
DLL +NL S+ N+ S FKN N LTD +E + ++LK++ NL ID
Sbjct: 237 DLLSQSRPDNLSPFSHLSNE--SSDFFKNVKNVLTD---VETYHEFLKLL-NLYVQGIID 290
Query: 408 KPVENVETKAIPNELQKNGAGNGILELLSKSP 439
+ + + ++ +G L L S SP
Sbjct: 291 RNI--LVSRGFGFLKSNSGLWRSFLSLTSLSP 320
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 30.3 bits (65), Expect = 0.94
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 213 KVENPEAIQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNV 272
+V N A+ I+SE L +K +I N + F+ KI +K S +
Sbjct: 645 RVVNEHALNIMSEKLQRTNLKEQTPEMDIENSSQNLPFSPMKISPIRASPVKTIPSSPSP 704
Query: 273 SINLFNLSQDNLTN 286
+ N+F+ +N+TN
Sbjct: 705 TTNIFSAPLNNITN 718
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 30.3 bits (65), Expect = 0.94
Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 22/215 (10%)
Query: 179 NINSDNLKQLNDFIIQQSHVKSTSSIDQSGNIVYKVE---NPEAIQIISEIL-NAVLMKL 234
NI+S + +D QS S++ I SGN+ NP + S L N L +
Sbjct: 217 NISSSSAPLASD----QSPTVSSNHIHASGNLALGSNSGLNPRSPNSFSSPLDNPALHTV 272
Query: 235 FDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSINLF----------NLSQDNL 284
+ N + P+S+ ++N++ QN E +S N +++ NLS +
Sbjct: 273 DSTNVNGSLSPLSNSSSINQVHQN--ETHGSTISVPNPNLSQMGPSHSSSVPSNLSPNPA 330
Query: 285 TNKKDSLINIFG-NKIESPENNHAFSKTILFNKYM-QKTPEVNPITNALADYNLKMHPKQ 342
N+ S +I N P A + + ++ Q P++ PI YN + +Q
Sbjct: 331 QNENPSTTSIPSINNQPFPSGLSASNSNFASSSFIPQSVPQLLPIYYQTIFYNGNYYLQQ 390
Query: 343 VNADQDLLKFGNDNNLPLISNKQNQPIGSLVFKNT 377
+ + F + + PL+S P G L + T
Sbjct: 391 LPSASPPTMFRDHSFAPLVSPSIVSPYGVLENEET 425
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 261 EELKKYLSQDNVSINLFNLSQDNLTNKKD 289
+ +K Y + DN+ I+ NLS+D TN+KD
Sbjct: 147 QHMKIYGADDNLIISGANLSRDYFTNRKD 175
>SPBC1271.04c |||deoxyhypusine synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 29.5 bits (63), Expect = 1.6
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 260 EEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFSKTI--LFNKY 317
EE++ K L V F+L NL K +N GN I +N F + I + NK
Sbjct: 127 EEDIIKCLGPTYVGD--FHLDGKNLRAKG---LNRIGNLIVPNDNYCRFEEWIFPILNKM 181
Query: 318 MQKTPEVNPITNALADYNLKMHPKQVNADQDLLKFGNDNNLPLISNK-QNQPIGSLVFKN 376
+++ + T+ ++ K++N + +L + NN+P+ S + IG +++ +
Sbjct: 182 VEEQETLG--THWTPSSFIRRLGKEINDESSVLYWAYKNNIPIYSPALTDGSIGDMLYFH 239
Query: 377 TPNTLTDKPVLEDFEQYLKVVN 398
T T +P++ D ++ +N
Sbjct: 240 TYKA-TPRPLVLDIVADIRNMN 260
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 183 DNLKQLNDFIIQQSHVKSTSSIDQSGNIVYKVENPEAIQIISEILNAVLMK--LFDLHKN 240
D LK L+ F + ++ + D + ++V K+E P+ + ILN +L K F L +N
Sbjct: 1647 DGLKLLSCFHMYKNSLAKNLVSDLTAHLVKKIEEPDLENNVKLILNLILSKDYGFLLKEN 1706
Query: 241 IA 242
+A
Sbjct: 1707 LA 1708
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 135 NLMETGFTQRGSVRKLPDEVVKNIIISFYNFKPKAFNNLFDTNDNINSDNL--KQLNDFI 192
+L++ G T G++ PDE+ K + F P++ NLF N++ + Q N ++
Sbjct: 187 DLIKGGDTFHGNLH--PDEIAKLGVAHHGGFTPQSILNLFKNASLSNAEVIGKAQANVWV 244
Query: 193 IQQSHVKSTSSID 205
+ + +ST S D
Sbjct: 245 DEAKYQRSTQSKD 257
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 28.3 bits (60), Expect = 3.8
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 402 KAQTIDKPVENVETKAIPNE-LQKNGAGNGILELLSKSPYWXXXXXXXXXXXVPYPSFNN 460
K T D+PVE+ E + +P E + + G GI + +KS P
Sbjct: 385 KLNTFDEPVESSEDEFVPKEKVIELSDGEGISTMANKSNDQPTRRASTHNSGPPAKRKRE 444
Query: 461 NLLQLQTIKNTDQN 474
+L+ TI + D+N
Sbjct: 445 SLVIDLTISDDDEN 458
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 206 QSGNIVYKVENPEAIQIISEILNAVLMKLFDLHKNIANGPV 246
+S N+V N AI++ + + +A+++KL D H+ NG V
Sbjct: 403 KSDNVVLVSTNDNAIRLYNTVTHALVLKLSDAHR--VNGRV 441
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 256 QQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFSKTILFN 315
Q ++EE K ++ VSI+ F +S++ N D ++ +IE EN H S ++
Sbjct: 685 QYMSQEEDSKLFNRSRVSIDSFKISKEE--NTPD--FAVYTIRIERLENGHVRSGWMVAR 740
Query: 316 KYMQ 319
+Y +
Sbjct: 741 RYRE 744
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 27.1 bits (57), Expect = 8.7
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 198 VKSTSSIDQSGNIVYKVENPEAIQIISEILNAVLMKLFD------LHKNIANGPVSHD-- 249
V S + Q+ ++YK NP + S+ N +++ + D +++N G + D
Sbjct: 609 VASFGRVLQNREVMYKYLNPNLFALFSKCKNDLVVYVMDSVTGSIVYQNKHQGIILFDKV 668
Query: 250 ---FNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENN- 305
F+ N + + + ++ LS +S+ LF S N K DS N+I S N+
Sbjct: 669 YGVFSENWLVYSYQSDVPN-LSTKIISVELFEGSHSN--EKIDS------NEIYSRHNDY 719
Query: 306 --HAFSKTILFNK 316
+AF+K +F++
Sbjct: 720 RPYAFTKAYIFDR 732
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,243,785
Number of Sequences: 5004
Number of extensions: 146286
Number of successful extensions: 353
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 343
Number of HSP's gapped (non-prelim): 19
length of query: 693
length of database: 2,362,478
effective HSP length: 78
effective length of query: 615
effective length of database: 1,972,166
effective search space: 1212882090
effective search space used: 1212882090
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)
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