Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000168-TA|BGIBMGA000168-PA|undefined
(693 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55) 36 0.083
SB_18025| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.083
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 33 0.58
SB_34026| Best HMM Match : PLDc (HMM E-Value=0.063) 33 0.77
SB_47839| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.1
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 31 4.1
SB_35735| Best HMM Match : FF (HMM E-Value=2.29995e-41) 30 5.4
SB_43623| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.4
SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_34345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
>SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55)
Length = 607
Score = 36.3 bits (80), Expect = 0.083
Identities = 62/300 (20%), Positives = 119/300 (39%), Gaps = 26/300 (8%)
Query: 131 TKNINLMETGFTQRGSVRKLPDEVVKNIIISFYNFKPKAFNNL-FDTNDNINSDNLKQLN 189
T N+ T K+ +++ K + I N K N + + + + +
Sbjct: 42 TNNVTNKVTNEVTNKITNKVTNKMTKKVTIKVTN---KVTNKVTYKMTKKVTCNVANNVT 98
Query: 190 DFIIQQSHVKSTSSIDQSGNIVYKVENPEAIQIISEILNAVLMKLFDLHKNIANGPVSHD 249
+ + + K T+ + + + KV N A ++ +++ N V K+ + N +++
Sbjct: 99 NKVTNEVTNKMTNKV--TNKVANKVTNKVANKVTNKVTNKVTNKVTNKVTNKVANKLTN- 155
Query: 250 FNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFS 309
NV + N Y + V+ + N + +TNK + NK+ NN +
Sbjct: 156 -NVTNKKTNKMTNKVTYNVTNKVTKEVTNKMTNKVTNKATYKVT---NKVTYKVNNKVTN 211
Query: 310 KTILFNKYMQKTPEV-NPITNALADYNLKMHPKQVNADQDLLKFGNDNNLPLISNKQNQP 368
K + N + T V N +TN + + K++ K N + K +N ++NK N
Sbjct: 212 K-VTKNVTNKVTNNVTNKVTNEVTN---KVNNKVTNK---VTKKVTNN----VTNKVNNN 260
Query: 369 IGSLVFKNTPNTLTDKPVLEDFEQYLKVVNN--LNK-AQTIDKPVENVETKAIPNELQKN 425
+ + V N N +T+K + + V N NK + V N T + N+L N
Sbjct: 261 VTNKVTNNVTNKVTNKVANKVTNKVANKVTNKVANKVTNKVANKVTNKVTNKVANKLTNN 320
>SB_18025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 36.3 bits (80), Expect = 0.083
Identities = 36/154 (23%), Positives = 60/154 (38%), Gaps = 13/154 (8%)
Query: 244 GPVSHDFNVNKIQQ----NAEEELKKYLSQDNVSINLFNLSQDNLTNKK-DSLINIFGNK 298
GP SH F +Q+ E+EL+K N S KK + + IFGN
Sbjct: 122 GPHSHTFGACALQKCNIPQLEQELQKSAVDANRSRQTMIEQMTAFEKKKIEDIKTIFGNY 181
Query: 299 IESPENNHAFS---KTILFNKYMQKTPEVNPITNALADYNLKMHPKQVNADQDLLKFGND 355
HA + T+ F M+ E + L + +HP + + D++K+G+
Sbjct: 182 FHGQMMYHAKALEINTLAFQNLMKIDEEQD-----LEAFQTALHPSSMPSRLDVVKYGSQ 236
Query: 356 NNLPLISNKQNQPIGSLVFKNTPNTLTDKPVLED 389
N+L ++ + L T + + L D
Sbjct: 237 NSLQRFGSQGSLEGSQLSLNRTNQSFQSQGTLND 270
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 33.5 bits (73), Expect = 0.58
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 185 LKQLNDFIIQQSHVKSTSSID--QSGNIVYKVENPEAIQIISEILNAVLMKLFDLHKNIA 242
LK++ Q S KS SS+D SG V V +PE Q+ +E+ + ++
Sbjct: 2 LKRIRKTSKQMSRGKSASSLDGLDSGETV--VVDPEVPQVANEVKRS---------SSVR 50
Query: 243 NGPVSHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESP 302
+ N K ++ +E KK +D +I + N+ ++ + K D + G ++E
Sbjct: 51 KKSAQEEGNRGK-EEKKKENKKKEKEKDEQNIEVENVLKEVASLKND--LQSMGEQLERE 107
Query: 303 ENNHAFSKTILFNKYMQKTPEVNPITNALADYNLKMHPKQVNAD 346
+ ++A K I + T ++ KMHP + D
Sbjct: 108 KAHNAELKAIKTQQISALTVKLATAIRQKEAAEAKMHPSHMTND 151
>SB_34026| Best HMM Match : PLDc (HMM E-Value=0.063)
Length = 499
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 263 LKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFSKTILFNKYMQKTP 322
LK YL+ D V ++ NLS D TN++D I I SPE F + + +
Sbjct: 185 LKVYLTDDTVIMSGANLSNDYFTNRQDRYIEI----KNSPEVADFFHELVSSVSDISLQL 240
Query: 323 EVNPITNALADYNLKMHPKQVNADQDLLK 351
+ T+ L D+ HP + N + + K
Sbjct: 241 HKDDTTHMLKDF--AFHPSESNKTEFITK 267
>SB_47839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 30.7 bits (66), Expect = 4.1
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 14 NDNGT------CTNIAAILIVFRIALSKQNIENDKIDLILNDAQEMLRKLTTDKKYRFSS 67
ND+GT C N+A L + ++ +K N+E + + ++L D E LR + + F
Sbjct: 15 NDDGTDLFPPRCENVAEFLRLLKLKATKLNLEKETLYIVL-DKAERLRDMDANVLAGFLR 73
Query: 68 LQPIPKEGEFQVLNTRIT 85
LQ + +L + IT
Sbjct: 74 LQELAGLNFCVILLSEIT 91
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 30.7 bits (66), Expect = 4.1
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 177 NDNINSDNLKQLNDFIIQQSHVKSTSSIDQSGNIVYKVENPEAIQIISEILNAVLMKLFD 236
+DN NSDNL N + +KS +S + N +N + ++ S+ N+ + +
Sbjct: 15 SDNSNSDNLNSDN---LNSDKLKSDNSNSDNSNS----DNSNSDKLKSDNSNSEKLNSNN 67
Query: 237 LHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFG 296
N +N S+ N N N+++ + L N + DN + K L+N
Sbjct: 68 SDSNNSNSDNSNSDNSNSDNSNSDK------------LKLVNSNPDNSNSDKLKLVNSNS 115
Query: 297 NKIESPENN 305
+K+ S +N
Sbjct: 116 DKLNSDNSN 124
Score = 30.7 bits (66), Expect = 4.1
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 177 NDNINSDNLKQLNDFIIQQSHVKSTSSIDQSGNIVYKVENPEAIQIISEILNAVLMKLFD 236
+DN+NSDNL +D + + S+ D S + K +N + ++ S ++ +
Sbjct: 20 SDNLNSDNLN--SDKLKSDNSNSDNSNSDNSNSDKLKSDNSNSEKLNSNNSDSNNSNSDN 77
Query: 237 LHKNIANGPVSHDFN---VNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLIN 293
+ + +N S+ VN N+ + K ++ ++ +N N + DN + + N
Sbjct: 78 SNSDNSNSDNSNSDKLKLVNSNPDNSNSDKLKLVNSNSDKLNSDNSNSDNSNSDNSNSDN 137
Query: 294 IFGNKIE 300
NK++
Sbjct: 138 SNSNKLK 144
>SB_35735| Best HMM Match : FF (HMM E-Value=2.29995e-41)
Length = 251
Score = 30.3 bits (65), Expect = 5.4
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 44 DLILN-DAQEMLRKLTTDKKYRFSSLQPIPKEGEFQVLNTRITDNEPNSKIGCRDALKLM 102
D++ N D K T K +R+S ++P+PKE ++ N I+ + R L
Sbjct: 115 DMVRNSDVTWKETKRTLRKDHRWSMVEPLPKEEREKIFNDHISQLHERKREQFRKLLDET 174
Query: 103 TEFKMST 109
TE +++
Sbjct: 175 TELTLTS 181
>SB_43623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 111 LINHICQNELXXXXXXXIDSTKNINLMETGFTQRGSVRKLPDEVVKNIIISFYN--FKPK 168
LI +N L IDS+ + F G++R++ D V +N +IS YN KP
Sbjct: 173 LIGSRYKNNLDKQPSIRIDSSNIKQVSRKVFCGIGAIRRVKDYVDRNTLISIYNALIKPH 232
Query: 169 AFNNLFDTNDNINSDNLKQL 188
F + D + ++++L
Sbjct: 233 -FGYCSEVWDTLGQGHVRRL 251
>SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 29.5 bits (63), Expect = 9.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 297 NKIESPENNHAFSKTILFNKYMQKTPEVNPITNALADYNLKMHPKQVNADQDLLKFGND 355
N +P NH + + +MQ+ N N+L + N ++ P Q N Q+ L+F N+
Sbjct: 336 NTTTNPNQNHINNIANSYGNFMQQMTTNNSAFNSLQNLNQQLGPGQRNM-QNQLEFMNE 393
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.5 bits (63), Expect = 9.5
Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 9/156 (5%)
Query: 171 NNLFDTNDNINSDNLKQLNDFIIQQSHVKSTSSIDQSGNIVYKVENPEAIQIISEILNAV 230
NN D N+ +++N+ N+ ++ ++I + N N IS+ N +
Sbjct: 167 NNTSDNNNTSDNNNISDNNN-TSDNNNTSDNNNISDNNN---SDNNNSDNNNISDNNNII 222
Query: 231 LMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDS 290
D + N S + N I N +S +N S N +N+++ +S
Sbjct: 223 DNNNSDNNNTSDNNNTSDN---NNISDNNNTSDNNNISDNNNSDNNNTSDNNNISDNNNS 279
Query: 291 LINIFGNKIESPENNHAFSKTILFNKYMQKTPEVNP 326
N + + +NN++ + NK+ Q P+V P
Sbjct: 280 DNNNTSDNNNTSDNNNSDNNNTSDNKHQQ--PQVPP 313
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 29.5 bits (63), Expect = 9.5
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 221 QIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLS 280
QI+ E A ++ DL PV+ D + + N+ + ++ DN + N N +
Sbjct: 110 QIMREKYGA--LEYIDLVPGGGEVPVTQDNSNDDDNNNSNNQNQQQQKDDNNNNNKSNNN 167
Query: 281 QDNLTNKKDSLINIFGNK 298
D+ N KD N GNK
Sbjct: 168 DDDKNNSKDDNNNNNGNK 185
>SB_34345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 29.5 bits (63), Expect = 9.5
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 180 INSDNLKQLNDFIIQQSHVKSTSSIDQSGNIVYKVENPEAIQIISEILNAVLMKLFDLHK 239
+N + K L+D S + G V PE I + LNA ++L DL K
Sbjct: 334 LNVECEKSLDDIFELNPAFYCISDVSIKGGAVTSGNRPEIIDVFFSHLNAQELRLHDLFK 393
Query: 240 NIAN 243
++N
Sbjct: 394 MLSN 397
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,454,037
Number of Sequences: 59808
Number of extensions: 899609
Number of successful extensions: 1850
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1837
Number of HSP's gapped (non-prelim): 19
length of query: 693
length of database: 16,821,457
effective HSP length: 87
effective length of query: 606
effective length of database: 11,618,161
effective search space: 7040605566
effective search space used: 7040605566
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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