Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000168-TA|BGIBMGA000168-PA|undefined
(693 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358830-1|AAQ89189.1| 723|Homo sapiens leucine-rich protein pr... 35 1.1
AL445222-17|CAH72930.1| 723|Homo sapiens leucine rich repeat an... 35 1.1
AL445222-16|CAH72931.1| 696|Homo sapiens leucine rich repeat an... 35 1.1
AK091589-1|BAC03703.1| 723|Homo sapiens protein ( Homo sapiens ... 35 1.1
AK056203-1|BAB71119.1| 696|Homo sapiens protein ( Homo sapiens ... 35 1.1
CR769776-9|CAI95380.1| 178|Homo sapiens coiled-coil domain cont... 34 1.5
BX649567-3|CAI94991.1| 171|Homo sapiens novel protein protein. 33 2.6
BC009239-1|AAH09239.1| 723|Homo sapiens leucine rich repeat and... 33 4.5
AL606469-1|CAI13710.1| 296|Homo sapiens novel protein protein. 32 5.9
AL592296-1|CAI16750.1| 296|Homo sapiens novel protein protein. 32 5.9
>AY358830-1|AAQ89189.1| 723|Homo sapiens leucine-rich protein
protein.
Length = 723
Score = 34.7 bits (76), Expect = 1.1
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 215 ENPEAIQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSI 274
E+ + +Q S + +L + + + G H ++N +Q +E+LK+ ++ N+S
Sbjct: 280 EHTQLLQQSSSQKDEILQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQ--TEQNISS 337
Query: 275 NLFNLSQDNLTNKKDSLI 292
+ L QDN KK S I
Sbjct: 338 RIQKLLQDNQRQKKSSEI 355
>AL445222-17|CAH72930.1| 723|Homo sapiens leucine rich repeat and
sterile alpha motif containing 1 protein.
Length = 723
Score = 34.7 bits (76), Expect = 1.1
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 215 ENPEAIQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSI 274
E+ + +Q S + +L + + + G H ++N +Q +E+LK+ ++ N+S
Sbjct: 280 EHTQLLQQSSSQKDEILQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQ--TEQNISS 337
Query: 275 NLFNLSQDNLTNKKDSLI 292
+ L QDN KK S I
Sbjct: 338 RIQKLLQDNQRQKKSSEI 355
>AL445222-16|CAH72931.1| 696|Homo sapiens leucine rich repeat and
sterile alpha motif containing 1 protein.
Length = 696
Score = 34.7 bits (76), Expect = 1.1
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 215 ENPEAIQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSI 274
E+ + +Q S + +L + + + G H ++N +Q +E+LK+ ++ N+S
Sbjct: 280 EHTQLLQQSSSQKDEILQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQ--TEQNISS 337
Query: 275 NLFNLSQDNLTNKKDSLI 292
+ L QDN KK S I
Sbjct: 338 RIQKLLQDNQRQKKSSEI 355
>AK091589-1|BAC03703.1| 723|Homo sapiens protein ( Homo sapiens
cDNA FLJ34270 fis, clone FEBRA2003100. ).
Length = 723
Score = 34.7 bits (76), Expect = 1.1
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 215 ENPEAIQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSI 274
E+ + +Q S + +L + + + G H ++N +Q +E+LK+ ++ N+S
Sbjct: 280 EHTQLLQQSSSQKDEILQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQ--TEQNISS 337
Query: 275 NLFNLSQDNLTNKKDSLI 292
+ L QDN KK S I
Sbjct: 338 RIQKLLQDNQRQKKSSEI 355
>AK056203-1|BAB71119.1| 696|Homo sapiens protein ( Homo sapiens
cDNA FLJ31641 fis, clone NT2RI2003695, weakly similar to
TRICHOHYALIN. ).
Length = 696
Score = 34.7 bits (76), Expect = 1.1
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 215 ENPEAIQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSI 274
E+ + +Q S + +L + + + G H ++N +Q +E+LK+ ++ N+S
Sbjct: 280 EHTQLLQQSSSQKDEILQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQ--TEQNISS 337
Query: 275 NLFNLSQDNLTNKKDSLI 292
+ L QDN KK S I
Sbjct: 338 RIQKLLQDNQRQKKSSEI 355
>CR769776-9|CAI95380.1| 178|Homo sapiens coiled-coil domain
containing 29 protein.
Length = 178
Score = 34.3 bits (75), Expect = 1.5
Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 7/165 (4%)
Query: 220 IQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSINLFNL 279
+++ +LN + FD H ++ + D + K++Q + + +K L Q N N+ +L
Sbjct: 5 LEMTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKEQAQYEKQLEQLNKD-NMASL 63
Query: 280 SQDNLTNK----KDSLINIFGNKI--ESPENNHAFSKTILFNKYMQKTPEVNPITNALAD 333
++ LT K K S + ++ E E AF+ + N M K + A+
Sbjct: 64 NKKELTLKDVECKFSEMKTAYEEVTTELEEYKEAFAAALKANNSMSKKLTKSNKKIAVIS 123
Query: 334 YNLKMHPKQVNADQDLLKFGNDNNLPLISNKQNQPIGSLVFKNTP 378
L M +Q+ L D P + N + + TP
Sbjct: 124 MKLLMEKEQMKYFLSALPTRRDPESPCVENLTSIGLNRKYIPQTP 168
>BX649567-3|CAI94991.1| 171|Homo sapiens novel protein protein.
Length = 171
Score = 33.5 bits (73), Expect = 2.6
Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 5/164 (3%)
Query: 220 IQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKK---YLSQDNV-SIN 275
+++ +LN + FD H ++ + D + K++Q + + +K LS+DN+ S+N
Sbjct: 5 LEMTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKEQAQYEKQLEQLSKDNMASLN 64
Query: 276 LFNLSQDNLTNKKDSLINIFGN-KIESPENNHAFSKTILFNKYMQKTPEVNPITNALADY 334
L+ ++ K + + E E AF+ + N M K + A+
Sbjct: 65 KKELTLKDVECKFSEMKTAYEEVTTELEEYKEAFAAALKANNSMSKKLTKSNKKIAVISM 124
Query: 335 NLKMHPKQVNADQDLLKFGNDNNLPLISNKQNQPIGSLVFKNTP 378
L M +Q+ L D P + N + + TP
Sbjct: 125 KLLMEKEQMKYFLSALPTRRDPESPCVENLTSIGLNRKYIPQTP 168
>BC009239-1|AAH09239.1| 723|Homo sapiens leucine rich repeat and
sterile alpha motif containing 1 protein.
Length = 723
Score = 32.7 bits (71), Expect = 4.5
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 215 ENPEAIQIISEILNAVLMKLFDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSI 274
E+ + +Q S + +L + + + G H +++ +Q +E+LK+ ++ N+S
Sbjct: 280 EHTQLLQQSSSQKDEILQTVKEEQSRLEQGLSEHQRHLDAERQRLQEQLKQ--TEQNISS 337
Query: 275 NLFNLSQDNLTNKKDSLI 292
+ L QDN KK S I
Sbjct: 338 RIQKLLQDNQRQKKSSEI 355
>AL606469-1|CAI13710.1| 296|Homo sapiens novel protein protein.
Length = 296
Score = 32.3 bits (70), Expect = 5.9
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 154 VVKNIIISFYNFKPKAFNNLFDTNDNINSDNLKQLNDFIIQQSHVKSTSSIDQSGNIVYK 213
V NI++ K + L + D ++ F + S KS + N+ YK
Sbjct: 151 VKTNILLRKLKEKEEVIKELKEELDQYKDFGFHKMESFAKETSSPKSNL---EKENLEYK 207
Query: 214 VENPEAIQIISEILNAVLMKL 234
VEN +QIISE+ + + L
Sbjct: 208 VENERLLQIISELEEEIQINL 228
>AL592296-1|CAI16750.1| 296|Homo sapiens novel protein protein.
Length = 296
Score = 32.3 bits (70), Expect = 5.9
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 154 VVKNIIISFYNFKPKAFNNLFDTNDNINSDNLKQLNDFIIQQSHVKSTSSIDQSGNIVYK 213
V NI++ K + L + D ++ F + S KS + N+ YK
Sbjct: 151 VKTNILLRKLKEKEEVIKELKEELDQYKDFGFHKMESFAKETSSPKSNL---EKENLEYK 207
Query: 214 VENPEAIQIISEILNAVLMKL 234
VEN +QIISE+ + + L
Sbjct: 208 VENERLLQIISELEEEIQINL 228
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,505,218
Number of Sequences: 224733
Number of extensions: 3566657
Number of successful extensions: 5632
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 5632
Number of HSP's gapped (non-prelim): 10
length of query: 693
length of database: 73,234,838
effective HSP length: 95
effective length of query: 598
effective length of database: 51,885,203
effective search space: 31027351394
effective search space used: 31027351394
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 69 (31.9 bits)
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