Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000168-TA|BGIBMGA000168-PA|undefined
(693 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 34 0.29
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 34 0.29
Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical p... 34 0.39
Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical pr... 34 0.39
AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B regula... 34 0.39
AF039045-10|AAB94201.1| 393|Caenorhabditis elegans Hypothetical... 34 0.39
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 32 1.2
Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical p... 32 1.2
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 32 1.2
U37430-6|AAB52672.1| 414|Caenorhabditis elegans Hypothetical pr... 31 2.1
AC006722-1|AAK68420.1| 401|Caenorhabditis elegans Hypothetical ... 31 2.1
AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical ... 31 2.1
U40030-7|AAT81189.1| 525|Caenorhabditis elegans Hypothetical pr... 31 2.7
AF067940-8|AAC19200.1| 518|Caenorhabditis elegans Hypothetical ... 30 4.8
Z81109-10|CAB54296.1| 270|Caenorhabditis elegans Hypothetical p... 30 6.3
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 30 6.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 6.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 6.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 6.3
AL117195-6|CAB55012.1| 732|Caenorhabditis elegans Hypothetical ... 30 6.3
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 8.4
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 8.4
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 8.4
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 8.4
AL117203-18|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 29 8.4
AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical ... 29 8.4
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 34.3 bits (75), Expect = 0.29
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 176 TNDNINSDNLKQLNDFIIQQSHVKSTSSIDQSGNIVYKVENPEAIQIISEILNAVLMKLF 235
+N +I+ ++ +++ + KSTS+ ++SG+I V E ++ S +N L +F
Sbjct: 2298 SNKHISDESSISMDEIFSRSQDNKSTSNFEKSGSIPIIVLPGEEKEVASASIN--LNGVF 2355
Query: 236 DLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIF 295
K + + VNK+Q+N+ ++ + D SI+L ++ + T++K I
Sbjct: 2356 LEGKQKTSTDYGRE-KVNKVQENSGSYSTRH-AMDGASISLDDIFNTSSTSQKTETDKI- 2412
Query: 296 GNKIESPE 303
N E P+
Sbjct: 2413 DNSQEFPQ 2420
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 34.3 bits (75), Expect = 0.29
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 176 TNDNINSDNLKQLNDFIIQQSHVKSTSSIDQSGNIVYKVENPEAIQIISEILNAVLMKLF 235
+N +I+ ++ +++ + KSTS+ ++SG+I V E ++ S +N L +F
Sbjct: 2298 SNKHISDESSISMDEIFSRSQDNKSTSNFEKSGSIPIIVLPGEEKEVASASIN--LNGVF 2355
Query: 236 DLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIF 295
K + + VNK+Q+N+ ++ + D SI+L ++ + T++K I
Sbjct: 2356 LEGKQKTSTDYGRE-KVNKVQENSGSYSTRH-AMDGASISLDDIFNTSSTSQKTETDKI- 2412
Query: 296 GNKIESPE 303
N E P+
Sbjct: 2413 DNSQEFPQ 2420
>Z81070-12|CAB03008.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 33.9 bits (74), Expect = 0.39
Identities = 16/48 (33%), Positives = 33/48 (68%), Gaps = 5/48 (10%)
Query: 247 SHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINI 294
+H ++VN I N+++E +LS D++ +NL+NL +TN+ ++++I
Sbjct: 215 AHTYHVNSISVNSDQET--FLSADDLRVNLWNL---EITNESFNIVDI 257
>Z75544-6|CAA99882.1| 495|Caenorhabditis elegans Hypothetical
protein F26E4.1 protein.
Length = 495
Score = 33.9 bits (74), Expect = 0.39
Identities = 16/48 (33%), Positives = 33/48 (68%), Gaps = 5/48 (10%)
Query: 247 SHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINI 294
+H ++VN I N+++E +LS D++ +NL+NL +TN+ ++++I
Sbjct: 215 AHTYHVNSISVNSDQET--FLSADDLRVNLWNL---EITNESFNIVDI 257
>AF174643-1|AAD51977.1| 495|Caenorhabditis elegans PP2A-B
regulatory subunit PR55/B protein.
Length = 495
Score = 33.9 bits (74), Expect = 0.39
Identities = 16/48 (33%), Positives = 33/48 (68%), Gaps = 5/48 (10%)
Query: 247 SHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINI 294
+H ++VN I N+++E +LS D++ +NL+NL +TN+ ++++I
Sbjct: 215 AHTYHVNSISVNSDQET--FLSADDLRVNLWNL---EITNESFNIVDI 257
>AF039045-10|AAB94201.1| 393|Caenorhabditis elegans Hypothetical
protein F15E11.4 protein.
Length = 393
Score = 33.9 bits (74), Expect = 0.39
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 262 ELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFS--KT--ILFNKY 317
EL K + + + F S TN ++ IFGN + SPEN H S KT ++F
Sbjct: 218 ELPKLVENGKMCNSTFTTSP---TNIQEGCTQIFGNLVISPENEHLVSQLKTVEVIFGGL 274
Query: 318 MQKTPEVNPI---TNALADYNLKMHPKQVNADQDLLKFGNDNNLPLISNKQNQPIGSLVF 374
+ K ++ I N Y+L+ ++ +Q+ +D + P + ++ +++F
Sbjct: 275 ILKNSNLSKIDFFDNLKYIYSLEKSIAAISVEQN--PNLSDISFPSLKLAKSNAAYAIIF 332
Query: 375 KNTPNTLT 382
N TL+
Sbjct: 333 NNNSQTLS 340
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 32.3 bits (70), Expect = 1.2
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 292 INIFGNKIESPENNHA---FSKTILFNKYMQKTPEVNPITNALADYNLKMHPKQVNADQD 348
IN GN++E + HA I+ N++ KT + LA + + + +Q++ D+D
Sbjct: 493 INALGNRVEEANHEHADAVVKMEIIRNRH--KTLSYRIVRVMLAQWIVSRYSRQIDTDED 550
Query: 349 LLKFGNDNNLPLISNKQNQ 367
+++ D L + N+ NQ
Sbjct: 551 VIEAKADTLLAQM-NRHNQ 568
>Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical
protein K07F5.13b protein.
Length = 549
Score = 32.3 bits (70), Expect = 1.2
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 292 INIFGNKIESPENNHA---FSKTILFNKYMQKTPEVNPITNALADYNLKMHPKQVNADQD 348
IN GN++E + HA I+ N++ KT + LA + + + +Q++ D+D
Sbjct: 403 INALGNRVEEANHEHADAVVKMEIIRNRH--KTLSYRIVRVMLAQWIVSRYSRQIDTDED 460
Query: 349 LLKFGNDNNLPLISNKQNQ 367
+++ D L + N+ NQ
Sbjct: 461 VIEAKADTLLAQM-NRHNQ 478
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 32.3 bits (70), Expect = 1.2
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 292 INIFGNKIESPENNHA---FSKTILFNKYMQKTPEVNPITNALADYNLKMHPKQVNADQD 348
IN GN++E + HA I+ N++ KT + LA + + + +Q++ D+D
Sbjct: 466 INALGNRVEEANHEHADAVVKMEIIRNRH--KTLSYRIVRVMLAQWIVSRYSRQIDTDED 523
Query: 349 LLKFGNDNNLPLISNKQNQ 367
+++ D L + N+ NQ
Sbjct: 524 VIEAKADTLLAQM-NRHNQ 541
>U37430-6|AAB52672.1| 414|Caenorhabditis elegans Hypothetical
protein K09F5.1 protein.
Length = 414
Score = 31.5 bits (68), Expect = 2.1
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 337 KMHPKQVNADQDLLKFGNDNNLPLISNKQNQPIGSLVFKNTPNTLTDKPVLEDFEQYLKV 396
K+ K N L+F D+N P +N ++ VFK N L KPV + + YL+
Sbjct: 204 KLDSKLNNLSFYELRFHIDSN-PQFANTADELFKKFVFKEFLNKLRGKPVNKKWRVYLEE 262
Query: 397 VNNLNKAQTIDKPVENVETKAIPNELQKN 425
+ + + I N+ TK I +++K+
Sbjct: 263 LKDEENKKAIKL---NMLTKRIGGKMEKS 288
>AC006722-1|AAK68420.1| 401|Caenorhabditis elegans Hypothetical
protein Y19D10A.7 protein.
Length = 401
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 275 NLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFSK 310
N N+ D+L N D+ ++ GN + PEN H SK
Sbjct: 225 NNVNMCNDSLENLLDNCTHVNGNVMIGPENEHLVSK 260
>AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical
protein F56A4.9 protein.
Length = 462
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 275 NLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFSK 310
N N+ D+L N D+ ++ GN + PEN H SK
Sbjct: 270 NNVNMCNDSLENLLDNCTHVNGNVMIGPENEHLVSK 305
>U40030-7|AAT81189.1| 525|Caenorhabditis elegans Hypothetical
protein T13C2.2 protein.
Length = 525
Score = 31.1 bits (67), Expect = 2.7
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 300 ESPENNHAFSKTILFNKYMQKTPEVNPITNALADYNLKMHPKQVNADQDLLKFGN-DNNL 358
E PE +H F + + F K P VN + + +++HP+ ++ Q + F +
Sbjct: 216 EFPEEDHHFEQKLTFPKEQLMVPRVN-MPFQSQEKRIQIHPQSISGSQQNVLFPDLPPTR 274
Query: 359 PLISNKQNQPIGSLVFKNTPN 379
P+ NQ G PN
Sbjct: 275 PIEPTVSNQASGLRGLLENPN 295
>AF067940-8|AAC19200.1| 518|Caenorhabditis elegans Hypothetical
protein F36F12.1 protein.
Length = 518
Score = 30.3 bits (65), Expect = 4.8
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 42 KIDLILNDAQEMLRKLTTDKKY--RFSSLQPIPKEGEFQVLNTRITDNEPNSKIGCR 96
K L++ QE +++L T+ Y + + K+G+ Q +NT+ N KI CR
Sbjct: 429 KETLLMPSIQEFVKQLPTEDYYSTKLKACLEAQKQGKGQCVNTKACKLPNNDKIPCR 485
>Z81109-10|CAB54296.1| 270|Caenorhabditis elegans Hypothetical
protein R10D12.13b protein.
Length = 270
Score = 29.9 bits (64), Expect = 6.3
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 51 QEMLRKLTTDKKYRFSSLQPIPKEGEFQVLNTRITDNEP 89
Q+M K + YRF+++Q + KEGEF + ++ + EP
Sbjct: 50 QKMTEKEFQKRNYRFNAMQNLLKEGEF-FSDAKMREREP 87
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 29.9 bits (64), Expect = 6.3
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 18/176 (10%)
Query: 254 KIQQNAEEELKKYLSQDNVSINLFNLSQDNLT---NKKDSLINIFGNKIESPENNHAFSK 310
+++QN ++ L++ L Q+N S + + D++ N D+ + I N I N+
Sbjct: 119 RLEQN-QDALQRRL-QNNESSGVQSRDFDDIRRQMNGVDAKLMIMNNDISGLRNSMDRQV 176
Query: 311 TILF--NKYMQKTPEVNP--ITNALADYNLKMHPKQVNADQDLLKFGNDNNLPLISNKQN 366
T L N M+ P V+P I+NA + + K+ N DL K N + K +
Sbjct: 177 TDLMHINNEMKSRPVVDPSKISNATSQLDSKLRDMH-NQVMDLTK--NLSKEQRDREKDS 233
Query: 367 QPIGSLVFKNTPNTLTDKPVLEDFEQYLKVVNNLNKAQTIDKPVENVETKAIPNEL 422
+ G + + L D +D + ++NNL+K +DK N ET+ + +++
Sbjct: 234 KTAGDGIQR-----LQDMIRQQDLARQ-DIMNNLSKKGDVDKEKLNEETRRLNDKI 283
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.9 bits (64), Expect = 6.3
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 257 QNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFSKTILFNK 316
Q + E ++ +S N + N D + +S ++ GN + ++ S +FN
Sbjct: 1863 QFQQPEKREQVSTSNTDVMFVNQKVDVM----ESTVSTVGNAVRQSVSSSTNSWDYMFND 1918
Query: 317 YMQKTPEVNPITNALADYNLKMHPKQVN-ADQDLLKFGNDNNL 358
++ E+N I N L + + + P++++ Q++ F N N +
Sbjct: 1919 PFPESQEINVIENELYEPRVPLLPQKLSYKGQEI--FANTNTV 1959
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 6.3
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 257 QNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFSKTILFNK 316
Q + E ++ +S N + N D + +S ++ GN + ++ S +FN
Sbjct: 1863 QFQQPEKREQVSTSNTDVMFVNQKVDVM----ESTVSTVGNAVRQSVSSSTNSWDYMFND 1918
Query: 317 YMQKTPEVNPITNALADYNLKMHPKQVN-ADQDLLKFGNDNNL 358
++ E+N I N L + + + P++++ Q++ F N N +
Sbjct: 1919 PFPESQEINVIENELYEPRVPLLPQKLSYKGQEI--FANTNTV 1959
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 6.3
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 257 QNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGNKIESPENNHAFSKTILFNK 316
Q + E ++ +S N + N D + +S ++ GN + ++ S +FN
Sbjct: 1863 QFQQPEKREQVSTSNTDVMFVNQKVDVM----ESTVSTVGNAVRQSVSSSTNSWDYMFND 1918
Query: 317 YMQKTPEVNPITNALADYNLKMHPKQVN-ADQDLLKFGNDNNL 358
++ E+N I N L + + + P++++ Q++ F N N +
Sbjct: 1919 PFPESQEINVIENELYEPRVPLLPQKLSYKGQEI--FANTNTV 1959
>AL117195-6|CAB55012.1| 732|Caenorhabditis elegans Hypothetical
protein Y57A10A.7 protein.
Length = 732
Score = 29.9 bits (64), Expect = 6.3
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 235 FDLHKNIANGPVSHDFNVNKIQQNAEEELKKYLSQDNVSINLFNLSQ 281
FD ++ I N VSH N+N +++N E +S+ V F Q
Sbjct: 536 FDFYQ-IYNRDVSHSLNLNNLRENKEVSWNPSISEIKVDFTFFERQQ 581
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 29.5 bits (63), Expect = 8.4
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 279 LSQDNLTNKKDSLINIFGNKIESPENNHAFSKTILFNKYMQKTPEVNPITNALADYNLKM 338
LS +N S NI+ ++S ++ F I ++ KTP + P N L D N +
Sbjct: 890 LSITGYSNTITSQSNIYHLSLKSTDSKSPFEMHIAGTPHLPKTPFMCPKLN-LEDLNY-L 947
Query: 339 HPKQVNADQDLLKFGNDNNLPL 360
K+ N D+ + ++ + N +P+
Sbjct: 948 KSKKFNVDK-IKQYRHHNGIPI 968
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 366 NQPIGSLVFKNTPNTLTDKPVLEDFEQYLKVVNNLNKAQTIDKPVENVETKAIPNELQKN 425
N+ GS + + + + LTDK + ED YLK+ + DK V+ E+QK
Sbjct: 1107 NKESGSSLLRRSVDNLTDKRIKED---YLKLFRDSTDCAFYDKCVQEKNHLLKAIEIQKK 1163
Query: 426 G 426
G
Sbjct: 1164 G 1164
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 366 NQPIGSLVFKNTPNTLTDKPVLEDFEQYLKVVNNLNKAQTIDKPVENVETKAIPNELQKN 425
N+ GS + + + + LTDK + ED YLK+ + DK V+ E+QK
Sbjct: 1107 NKESGSSLLRRSVDNLTDKRIKED---YLKLFRDSTDCAFYDKCVQEKNHLLKAIEIQKK 1163
Query: 426 G 426
G
Sbjct: 1164 G 1164
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 366 NQPIGSLVFKNTPNTLTDKPVLEDFEQYLKVVNNLNKAQTIDKPVENVETKAIPNELQKN 425
N+ GS + + + + LTDK + ED YLK+ + DK V+ E+QK
Sbjct: 1107 NKESGSSLLRRSVDNLTDKRIKED---YLKLFRDSTDCAFYDKCVQEKNHLLKAIEIQKK 1163
Query: 426 G 426
G
Sbjct: 1164 G 1164
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 8.4
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 366 NQPIGSLVFKNTPNTLTDKPVLEDFEQYLKVVNNLNKAQTIDKPVENVETKAIPNELQKN 425
N+ GS + + + + LTDK + ED YLK+ + DK V+ E+QK
Sbjct: 1107 NKESGSSLLRRSVDNLTDKRIKED---YLKLFRDSTDCAFYDKCVQEKNHLLKAIEIQKK 1163
Query: 426 G 426
G
Sbjct: 1164 G 1164
>AL117203-18|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 29.5 bits (63), Expect = 8.4
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 279 LSQDNLTNKKDSLINIFGNKIESPENNHAFSKTILFNKYMQKTPEVNPITNALADYNLKM 338
LS +N S NI+ ++S ++ F I ++ KTP + P N L D N +
Sbjct: 890 LSITGYSNTITSQSNIYHLSLKSTDSKSPFEMHIAGTPHLPKTPFMCPKLN-LEDLNY-L 947
Query: 339 HPKQVNADQDLLKFGNDNNLPL 360
K+ N D+ + ++ + N +P+
Sbjct: 948 KSKKFNVDK-IKQYRHHNGIPI 968
>AF016439-5|AAB65900.1| 630|Caenorhabditis elegans Hypothetical
protein R02F11.4 protein.
Length = 630
Score = 29.5 bits (63), Expect = 8.4
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 251 NVNKIQQNAEEELKKYLSQDNVSINLFNLSQDNLTNKKDSLINIFGN-KIESPENNHAFS 309
+V + + ++ ELK+ ++ S++ + +NLT D L++ K E E A
Sbjct: 480 DVTYVGEESDGELKQKVAYLEKSVDELKIQNENLTAINDRLVDTLEEFKAEQAEMWKAI- 538
Query: 310 KTILFNKYMQKTPEVNPITNALADYNLKMHPKQVNADQDLLK----FGNDNNLPLISNKQ 365
+ M TP+ N I+N L + H QV D +K F + N I K
Sbjct: 539 ------RNMIPTPQ-NVISNFLVENEDGHHVHQVRWDMPAVKEFRIFVDGNQCGQIKGKN 591
Query: 366 NQPIGSLVFKNTPNTL 381
N + + N P+T+
Sbjct: 592 NSARITDLTSNEPHTV 607
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,740,703
Number of Sequences: 27539
Number of extensions: 729626
Number of successful extensions: 1842
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1813
Number of HSP's gapped (non-prelim): 54
length of query: 693
length of database: 12,573,161
effective HSP length: 86
effective length of query: 607
effective length of database: 10,204,807
effective search space: 6194317849
effective search space used: 6194317849
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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