Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000167-TA|BGIBMGA000167-PA|IPR004361|Glyoxalase I,
IPR004360|Glyoxalase/bleomycin resistance protein/dioxygenase
(173 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.12c |glo1|SPBC21D10.03c|glyoxalase I |Schizosaccharomyc... 130 1e-31
SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6 |Sch... 28 0.66
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 26 2.7
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 26 3.5
SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyce... 26 3.5
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 25 4.7
SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomy... 25 6.2
>SPBC12C2.12c |glo1|SPBC21D10.03c|glyoxalase I |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 302
Score = 130 bits (313), Expect = 1e-31
Identities = 64/153 (41%), Positives = 94/153 (61%), Gaps = 14/153 (9%)
Query: 17 PDPTTKDFMFQQTMYRIKDPRKTIPFYTGVLGMTLLKQLHFPAMKFSLFFMGYENPAEVP 76
P +F F TM R+KDP +I FY LGM ++ + P KF+ +F+ Y P+++P
Sbjct: 158 PKANISNFRFNHTMVRVKDPEPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAY--PSDLP 214
Query: 77 RDDDARTKWAMTRKATLELTYNWGTESDDSS-YHNGNS-DPRGFGHIGILVPDVDVACAR 134
R D R+ LELT+NWGTE + YHNGN D +G+GH+ I V +++ AC++
Sbjct: 215 RHD---------REGLLELTHNWGTEKESGPVYHNGNDGDEKGYGHVCISVDNINAACSK 265
Query: 135 FEQLGVKFIKRPNDGKMKGLAFIQDPDGYWIEI 167
FE G+ F K+ DG+MK +AF+ DPD YW+E+
Sbjct: 266 FEAEGLPFKKKLTDGRMKDIAFLLDPDNYWVEV 298
Score = 126 bits (304), Expect = 2e-30
Identities = 69/161 (42%), Positives = 97/161 (60%), Gaps = 9/161 (5%)
Query: 13 LCQTPDPTTKDFMFQQTMYRIKDPRKTIPFYTGVLGMTLLKQLHFPAMKFSLFFMGYENP 72
+ T D +T + TM R+KD K++ FYT V GM L+ Q F +FSL F+ ++ P
Sbjct: 1 MASTTDMST--YKLNHTMIRVKDLDKSLKFYTEVFGMKLIDQWVFEENEFSLSFLAFDGP 58
Query: 73 AEVPRDDDARTKWAMTRKATLELTYNWGTESDDSS-YHNGNSDP-RGFGHIGILVPDVDV 130
+ + R+K R+ LELTYN+GTE + Y NGN++P RGFGHI V +++
Sbjct: 59 GALNHGVE-RSK----REGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIES 113
Query: 131 ACARFEQLGVKFIKRPNDGKMKGLAFIQDPDGYWIEIFTSN 171
ACA E GV F K+ +DGKMK +AF DPD YWIE+ + +
Sbjct: 114 ACAYLESKGVSFKKKLSDGKMKHIAFALDPDNYWIELVSQS 154
>SPAC5D6.05 |sep11|pmc6, med18|mediator complex subunit Pmc6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 207
Score = 28.3 bits (60), Expect = 0.66
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 60 MKFSLFFMGYENPAEVPRDDDARTKWAMTRKATLELTYNWGTESDDSSYHNGNSDPRGFG 119
++F + + + P +PR D+ + ++ E W + S Y GNS+P+
Sbjct: 33 LEFWVVYRPKDVPPNLPRQPDSWLRLCSNIESHDETDTEWSKNTQWSMYLEGNSEPKRED 92
Query: 120 HIGI 123
GI
Sbjct: 93 KCGI 96
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 2.7
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 17 PDPTTKDFMFQQTMYRIKDPRKTIPF-----YTGVLGMTLLKQLHFPAMKFSLF 65
P T K + + T+ IK P +IP+ Y G+ G++L++ + F+LF
Sbjct: 234 PVDTAKSIVQRNTLLSIKTPLSSIPWLSFTIYRGI-GISLMRSALINSCNFTLF 286
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.8 bits (54), Expect = 3.5
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 10 IEALCQTPDPTTKDFMFQQTMYRIKDPRKT 39
+ +C PD T++++ + Y DP K+
Sbjct: 595 LRKICNHPDLVTREYLLHKEDYNYGDPEKS 624
>SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 25.8 bits (54), Expect = 3.5
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 106 SSYHNGNSDPRGFGHIGILVPDV---DVAC--ARF-EQLGVKFIKRPNDGKMKGLAFIQD 159
SS+H SD + +IG L D+ D+ C + F E + + ++ GK KG AF++
Sbjct: 21 SSWHQDYSDS-AYIYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKGFAFLKY 79
Query: 160 PD 161
D
Sbjct: 80 ED 81
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 4.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 9 EIEALCQTPDPTTKDFMFQQTMYRIKDPRKTIPFYTGVLGMTLLKQ 54
EI T DP T + + Q R+K+ TI F T ++ +LK+
Sbjct: 31 EIILEATTEDPETLENVIQALCERLKEQSWTIVFKTLIVFHVMLKE 76
>SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 424
Score = 25.0 bits (52), Expect = 6.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 141 KFIKRPNDGKMKGLAFIQDPDG 162
+F PND K+K L FIQ G
Sbjct: 319 RFRSNPNDPKLKHLKFIQTKRG 340
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.138 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 892,157
Number of Sequences: 5004
Number of extensions: 37043
Number of successful extensions: 70
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 58
Number of HSP's gapped (non-prelim): 8
length of query: 173
length of database: 2,362,478
effective HSP length: 68
effective length of query: 105
effective length of database: 2,022,206
effective search space: 212331630
effective search space used: 212331630
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 51 (24.6 bits)
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