GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000167-TA|BGIBMGA000167-PA|IPR004361|Glyoxalase I,
IPR004360|Glyoxalase/bleomycin resistance protein/dioxygenase
         (173 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32605| Best HMM Match : No HMM Matches (HMM E-Value=.)             112   1e-25
SB_18121| Best HMM Match : Glyoxalase (HMM E-Value=4.5e-09)           112   1e-25
SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19)          29   2.1  
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)              28   3.7  
SB_17930| Best HMM Match : Pkinase (HMM E-Value=0)                     27   6.4  
SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.4  
SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.4  
SB_52091| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.4  
SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29)                 27   8.4  
SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.4  

>SB_32605| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 201

 Score =  112 bits (270), Expect = 1e-25
 Identities = 49/92 (53%), Positives = 65/92 (70%)

Query: 5  ISPQEIEALCQTPDPTTKDFMFQQTMYRIKDPRKTIPFYTGVLGMTLLKQLHFPAMKFSL 64
          +S  ++ A    PDP TKDF+FQQTM RIKDP+ ++ FYT V+GM LL +  FP+M F+L
Sbjct: 3  LSDADVAAAVSQPDPCTKDFVFQQTMLRIKDPKASLDFYTRVMGMRLLTKYDFPSMTFTL 62

Query: 65 FFMGYENPAEVPRDDDARTKWAMTRKATLELT 96
          +F+GYE  A++P D   RTKW   R+A LELT
Sbjct: 63 YFLGYEKEADIPSDPVERTKWVFMRRACLELT 94



 Score = 79.4 bits (187), Expect = 1e-15
 Identities = 32/53 (60%), Positives = 43/53 (81%), Gaps = 1/53 (1%)

Query: 98  NWGTESDDS-SYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVKFIKRPNDG 149
           NWGTE+D + S+HN NS+P+GFGHIG+ VPDV  AC RF+ LG+ F+K+P+ G
Sbjct: 135 NWGTENDPNFSHHNFNSEPKGFGHIGVAVPDVYKACERFDNLGIPFVKKPDGG 187


>SB_18121| Best HMM Match : Glyoxalase (HMM E-Value=4.5e-09)
          Length = 188

 Score =  112 bits (270), Expect = 1e-25
 Identities = 49/92 (53%), Positives = 65/92 (70%)

Query: 5  ISPQEIEALCQTPDPTTKDFMFQQTMYRIKDPRKTIPFYTGVLGMTLLKQLHFPAMKFSL 64
          +S  ++ A    PDP TKDF+FQQTM RIKDP+ ++ FYT V+GM LL +  FP+M F+L
Sbjct: 3  LSDADVAAAVSQPDPCTKDFVFQQTMLRIKDPKASLDFYTRVMGMRLLTKYDFPSMTFTL 62

Query: 65 FFMGYENPAEVPRDDDARTKWAMTRKATLELT 96
          +F+GYE  A++P D   RTKW   R+A LELT
Sbjct: 63 YFLGYEKEADIPSDPVERTKWVFMRRACLELT 94



 Score = 81.0 bits (191), Expect = 5e-16
 Identities = 32/51 (62%), Positives = 43/51 (84%), Gaps = 1/51 (1%)

Query: 98  NWGTESDDS-SYHNGNSDPRGFGHIGILVPDVDVACARFEQLGVKFIKRPN 147
           NWGTE+D + S+HNGNS+P+GFGHIG+ VPDV  AC RF+ LG+ F+K+P+
Sbjct: 136 NWGTENDPNFSHHNGNSEPKGFGHIGVAVPDVYKACERFDNLGIPFVKKPD 186


>SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19)
          Length = 922

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 69  YENPAEVPRDDDARTKWAM---TRKATLELTYNWGTESDDSSYH-NGNSDPRGFGHIGIL 124
           YEN +  P  + A +KW     +  + L    N  +++ +   H NG + P+      ++
Sbjct: 833 YENESTEP-SNQAGSKWTKAIGSINSRLNSNANGISDASNGGMHMNGTTPPKN--ETVLV 889

Query: 125 VPDVDVACARFEQLGVKFIKRPNDG 149
           + D D   A  E+LG+  + R N+G
Sbjct: 890 IKDQDGLAAISEELGLAVLGRTNEG 914


>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
          Length = 468

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%)

Query: 89  RKATLELTYNWGT----ESDDSSYHNGNSD 114
           RK TL L +NW        DDSS+H+ +SD
Sbjct: 320 RKRTLILCFNWKPLRQLSCDDSSFHSASSD 349


>SB_17930| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 286

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 1   MAQGISPQEIEALCQTPDPTTKDFMFQQ 28
           M  G SP +I      PD  T+D++FQ+
Sbjct: 217 MLAGRSPFDIVGSADNPDQNTEDYLFQE 244


>SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 279

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 134 RFEQLGV-KFIKRPNDGKMKGLAFIQDPD 161
           RF+Q G  K + R   G+MKG AF+  PD
Sbjct: 136 RFQQNGAPKLVFRLMKGRMKGQAFVTFPD 164


>SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1669

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)

Query: 34  KDPRKTIPFYTGVLGMTLLKQLHFPAM--KFSLFFMGYENPAEVPRDDDARTKWAMTRKA 91
           KD   T+ ++TG   + LLK+   PA+  K    F  Y  P ++  D   +       K 
Sbjct: 831 KDYLLTVDYFTGYWEVDLLKKTDSPAVIRKLKQHFSRYGVPVQLVSDGGPQ----FDAKE 886

Query: 92  TLELTYNWGTESDDSSYHNGNSD 114
             +  Y W  E + SS  + N++
Sbjct: 887 FEDFAYEWDFEHNLSSPGHPNAN 909


>SB_52091| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1775

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 15/48 (31%), Positives = 20/48 (41%)

Query: 62   FSLFFMGYENPAEVPRDDDARTKWAMTRKATLELTYNWGTESDDSSYH 109
            F L F G   P ++  DD    K  + R  T EL       + + SYH
Sbjct: 1034 FELIFKGGRQPEKLQMDDGTEFKNRIFRPGTTELETGLLVHNYNHSYH 1081


>SB_17842| Best HMM Match : RVT_1 (HMM E-Value=2.2e-29)
          Length = 1167

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)

Query: 34  KDPRKTIPFYTGVLGMTLLKQLHFPAM--KFSLFFMGYENPAEVPRDDDARTKWAMTRKA 91
           KD   T+ ++TG   + LLK+   PA+  K    F  Y  P ++  D   +       K 
Sbjct: 867 KDYLLTVDYFTGYWEVDLLKKTDSPAVIRKLKQHFSRYGVPVQLVSDGGPQ----FDAKE 922

Query: 92  TLELTYNWGTESDDSSYHNGNSD 114
             +  Y W  E + SS  + N++
Sbjct: 923 FEDFAYEWDFEHNLSSPVHPNAN 945


>SB_10419| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 848

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 83  TKWAMTRKATLELTYNWGTESDDSSYHNGN 112
           + W+++  + L+  Y  G ES  SS+ NG+
Sbjct: 228 SSWSLSNSSKLDKLYYKGKESKTSSFQNGS 257


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.321    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,571,635
Number of Sequences: 59808
Number of extensions: 277337
Number of successful extensions: 400
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 390
Number of HSP's gapped (non-prelim): 13
length of query: 173
length of database: 16,821,457
effective HSP length: 77
effective length of query: 96
effective length of database: 12,216,241
effective search space: 1172759136
effective search space used: 1172759136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)