Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000166-TA|BGIBMGA000166-PA|IPR000618|Insect cuticle
protein
(492 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 43 5e-04
At2g33850.1 68415.m04155 expressed protein contains 1 transmembr... 36 0.046
At2g39440.1 68415.m04841 expressed protein 35 0.11
At1g75530.1 68414.m08778 forkhead-associated domain-containing p... 33 0.43
At1g03820.1 68414.m00363 expressed protein similar to arabinogal... 33 0.43
At5g27130.1 68418.m03238 MADS-box family protein various predict... 32 0.75
At5g10170.1 68418.m01177 inositol-3-phosphate synthase, putative... 32 0.75
At4g00752.1 68417.m00103 UBX domain-containing protein similar t... 32 0.75
At1g55365.1 68414.m06328 hypothetical protein 31 1.3
At5g28190.1 68418.m03413 hypothetical protein 31 1.7
At4g21440.1 68417.m03099 myb family transcription factor (MYB102... 31 2.3
At3g20860.1 68416.m02637 protein kinase family protein contains ... 30 3.0
At2g04620.1 68415.m00470 cation efflux family protein potential ... 30 3.0
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 30 3.0
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 30 4.0
At5g26980.1 68418.m03219 syntaxin 41 (SYP41) / TLG2a identical t... 30 4.0
At3g03200.1 68416.m00316 no apical meristem (NAM) family protein... 30 4.0
At5g60130.1 68418.m07538 transcriptional factor B3 family protei... 29 5.3
At4g12250.1 68417.m01942 NAD-dependent epimerase/dehydratase fam... 29 5.3
At3g08790.1 68416.m01021 VHS domain-containing protein / GAT dom... 29 5.3
At5g27960.1 68418.m03367 MADS-box protein (AGL90) 29 7.0
At3g58710.1 68416.m06543 WRKY family transcription factor contai... 29 7.0
At1g70370.1 68414.m08095 BURP domain-containing protein / polyga... 29 7.0
At5g48310.1 68418.m05968 expressed protein 29 9.3
At5g26650.1 68418.m03175 MADS-box protein (AGL36) contains inter... 29 9.3
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 29 9.3
At3g18810.1 68416.m02389 protein kinase family protein contains ... 29 9.3
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 29 9.3
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 42.7 bits (96), Expect = 5e-04
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 289 NNFN-NYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEFYNDDYSS 347
NN+ NY T +Y N+ + NN+N Y N + N NY +EF N++ ++
Sbjct: 129 NNYEENYPKKTENYGTKGYNNEEFNNNNNKYDANFKEEFNNNKYDENYAKEEFNNNNNNN 188
Query: 348 ELNSNYPSYISKFKSFADDKINDNYQVVTSTS 379
N Y + K +SF ++ ++ V S +
Sbjct: 189 NYNYKYDENV-KEESFPENNEDNKKNVYNSNA 219
Score = 29.9 bits (64), Expect = 4.0
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 16/146 (10%)
Query: 279 DYRKTNYDRGNNFNNYISTTRSYDDDVINSNKIANND----NDYGLNDY-AKLKNQNEYV 333
+Y K ++ NN NNY YD++V + NN+ N Y N Y +L+ + Y
Sbjct: 175 NYAKEEFNNNNNNNNY---NYKYDENVKEESFPENNEDNKKNVYNSNAYGTELERETPYK 231
Query: 334 NYDSKEFYNDDYSSELNSNYPSYISKFKSFADDKINDNYQVVTSTSKPNFDDIRNLLIDE 393
Y +N + ++ + S + +D+ + +Y + + P + E
Sbjct: 232 GYS----HNLERQGMSDTRFMEKGSYYYDLYNDRNHGHYYRKSHSKSP--AGYYSSPATE 285
Query: 394 KTYNTRQSYNDIEPNSQSTLKDNSYN 419
Y +QSY+ N +++ KD YN
Sbjct: 286 TNYE-QQSYSYGNNNEENSFKD-PYN 309
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 143 NEHKVQNKKPYDYDYKVKSPEYNQHDNEIHDE-NNSDYNHAQNYAFSYTVKDK 194
NE N YD ++K + +N +E NN++ N+ NY + VK++
Sbjct: 149 NEEFNNNNNKYDANFKEEFNNNKYDENYAKEEFNNNNNNNNYNYKYDENVKEE 201
>At2g33850.1 68415.m04155 expressed protein contains 1 transmembrane
domain; similar to Protein E6 (Swiss-Prot:Q01197)
[Gossypium hirsutum]
Length = 267
Score = 36.3 bits (80), Expect = 0.046
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 11/128 (8%)
Query: 295 ISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVN---YDSKEFYNDDYSSELNS 351
I T + D N I ++N YGL + N NE +N Y+ Y+D +S+ S
Sbjct: 50 IETNEKKEPDDQNPAFIPQSENGYGLYGHETTDNNNEELNNNKYEDNVNYDDSFSTPSLS 109
Query: 352 NYPSYISKFKSFADDKINDNYQVVTSTSKPNFDDIRNLLIDEKTYNTRQSYNDI-EPNSQ 410
+K++ ++Y T N D + + Y T + NDI +P
Sbjct: 110 ETAQTQESYKNY-----KESYPKTTEIYDNNKD--TSYYENSNAYGTDKRDNDINDPYKG 162
Query: 411 STLKDNSY 418
+ KD SY
Sbjct: 163 YSNKDTSY 170
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 35.1 bits (77), Expect = 0.11
Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 301 YDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEFYNDDYSSELNSNYPSYI-SK 359
Y+D++ +S I ++ D ++ L+NQ E + +S E Y+D E++S+ S + S
Sbjct: 543 YEDNLDDSEDILDDSEDLPYPNFLSLENQLETLKSES-ESYSDGSGMEVSSDEESALDSA 601
Query: 360 FKSFADDKINDNYQVVTSTSKPNFDDI-RNLLIDEKTYNTRQSYNDIEPNSQSTLKDNSY 418
K + + S DDI +L+ +K + I P L+ Y
Sbjct: 602 IKESKESEPIGFLDTQESRDSSYIDDILAEVLLGDKNCVPGKRDLVITPKIFEKLEKKYY 661
Query: 419 NPVNFKKSN---LYTNIDESIAITPRNFVTNP 447
++K+S+ L+ ++ S+ +F P
Sbjct: 662 TETSWKRSDRKILFDRVNSSLVEILESFSATP 693
>At1g75530.1 68414.m08778 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 555
Score = 33.1 bits (72), Expect = 0.43
Identities = 28/152 (18%), Positives = 58/152 (38%), Gaps = 6/152 (3%)
Query: 272 DYINVITDYRKTNYDRGNNFNNYISTTRSYDDDVIN---SNKIANNDNDYGLN--DYAKL 326
D + V T Y T R + + D+ +N N D+D+G D
Sbjct: 79 DSVPVRTHYYTTRKRRRLELEESLKVNNNAIDEHLNVEEGNLFGECDDDFGFKFEDIESF 138
Query: 327 KNQNEYVNYDSKEFYNDDYSSELNSNYPSYISKFKSFADDKINDNYQVVTSTSKPNFDDI 386
+N + ++ + +E++ +++ + DD+I+D+Y T T+ +
Sbjct: 139 RNTFPDILLSPHDYQTTIFGNEIDDEDDRMVNQMLNINDDQIHDSYVTDTITTTTEHVLL 198
Query: 387 RNLLIDEKTYNTRQSYND-IEPNSQSTLKDNS 417
+ + D S N+ P+ Q + D +
Sbjct: 199 QEVFQDPLFQQPNASLNEPASPSQQQVILDQA 230
>At1g03820.1 68414.m00363 expressed protein similar to
arabinogalactan-protein; AGP (GI:1087015) {Pyrus
communis}; similar to Protein E6. (SP:Q01197) {Gossypium
hirsutum}
Length = 222
Score = 33.1 bits (72), Expect = 0.43
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 282 KTNYDRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEFY 341
K Y+ NN N Y TT +Y+D N N + G++D ++N + + +
Sbjct: 128 KDKYNNNNNNNGYTYTTNNYND---NGRGYGNEEEKQGMSDTRVMENGKYFYDTRGRNSE 184
Query: 342 NDDYSSELNSNYPSYISKFKSFAD 365
N N+ + ++F++ +
Sbjct: 185 NTPSRGYENARGNDHTNEFETMEE 208
>At5g27130.1 68418.m03238 MADS-box family protein various predicted
MADS box proteins, Arabidopsis thaliana
Length = 306
Score = 32.3 bits (70), Expect = 0.75
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 302 DDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEF 340
DD++ N ++N+D +GLN Y L N N +N+ +F
Sbjct: 265 DDEICFWNDLSNDDV-FGLNSYFGLDNTNAMINFGDSDF 302
>At5g10170.1 68418.m01177 inositol-3-phosphate synthase, putative /
myo-inositol-1-phosphate synthase, putative / MI-1-P
synthase, putative very strong similarity to SP|Q38862
Myo-inositol-1-phosphate synthase isozyme 2 (EC 5.5.1.4)
(MI-1-P synthase 2) (IPS 2) {Arabidopsis thaliana};
identical to SP|Q9LX12| Probable inositol-3-phosphate
synthase isozyme 3 (EC 5.5.1.4) (Myo-
inositol-1-phosphate synthase 3) (MI-1-P synthase 3)
(IPS 3) {Arabidopsis thaliana}; contains Pfam profile
PF01658: Myo-inositol-1-phosphate synthase
Length = 510
Score = 32.3 bits (70), Expect = 0.75
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 157 YKVKSPEYNQHDNEIH---DENNSDYNHA-QNYAFSYTVKDKDTGDDFSHSQH 205
+KV+SP +NEIH D ++ H +N AF +TVK K +F H
Sbjct: 6 FKVESPNVKYTENEIHSVYDYQTTELVHENKNGAFQWTVKPKTVKYEFKTDTH 58
>At4g00752.1 68417.m00103 UBX domain-containing protein similar to
Ara4-interacting protein [Arabidopsis thaliana]
GI:13160609; contains Pfam profiles PF00789: UBX domain,
PF02809: Ubiquitin interaction motif
Length = 469
Score = 32.3 bits (70), Expect = 0.75
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 352 NYPSYISKFKSFADDKINDNYQVVTSTSKPNFDDIRNLLIDEKTYNTRQSYNDIEPNSQS 411
+Y S +S A ++ ++ + +F D+ + D+ + +TR YN +E N+
Sbjct: 11 SYMSITGASESLAIQRLEEHGNNLPEAINAHFRDVERSIYDDSSLDTRSDYNVVEDNNH- 69
Query: 412 TLKDNSYNPVN 422
++ + PVN
Sbjct: 70 -VRGSETRPVN 79
>At1g55365.1 68414.m06328 hypothetical protein
Length = 126
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 364 ADDKINDNYQVVTSTSKPNFDDIRNLLIDEKT-YNTRQSYNDIEPNSQSTLKDNSYN 419
+D + Y+ ++++S DD L D YN R Y+D + S S+ D++Y+
Sbjct: 64 SDSFYSYTYETLSASSSSEADDDDRLAFDHNNLYNRRDYYSDDDDQSISSFDDDNYD 120
>At5g28190.1 68418.m03413 hypothetical protein
Length = 839
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 137 PIYRVINEHKVQNKKPYDYDYK--VKSPEYNQHDNEIHDENNSDYNHAQNYAFSYTVKDK 194
PIY V+ + K+ YD D K VK +N N+ D+ S+ + +Y + V D
Sbjct: 34 PIYDVVGDDVSSTKRTYDGDPKIGVKDDGFNDVKNDGFDDVVSNAENIDDYFNTQDVDDN 93
Query: 195 D 195
D
Sbjct: 94 D 94
>At4g21440.1 68417.m03099 myb family transcription factor (MYB102)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 350
Score = 30.7 bits (66), Expect = 2.3
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 307 NSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEFYNDDYSSELNSNYPSYISKFKSF--A 364
N N+ D+D + + +Q Y + +++ + + EL S+ P + ++ + F
Sbjct: 186 NQNQNLVVDHDSRTQEKQTVYSQTGVNQYQTNQYFENTITQELQSSMPPFPNEARQFNNM 245
Query: 365 DDKIND-NYQVVTSTSKPNFDDIRNLLIDEKTYNTRQSYNDIEPNSQSTLKDNSYNPVNF 423
D N Q + STS + D N S+ND +S + + D SY+ +F
Sbjct: 246 DHHFNGFGEQNLVSTSTTSVQDCYN-----------PSFNDY--SSSNFVLDPSYSDQSF 292
Query: 424 KKSNLYTNIDESIAITPRNFVTNPFVATTPSSYLVSTITNLQNRISS 470
N S+ TP ++P T SSY+ S+ + ++ I S
Sbjct: 293 -------NFANSVLNTPS---SSPSPTTLNSSYINSSSCSTEDEIES 329
>At3g20860.1 68416.m02637 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 427
Score = 30.3 bits (65), Expect = 3.0
Identities = 23/105 (21%), Positives = 39/105 (37%)
Query: 66 TPLVVTSRPLIESIAKSDLNPLPQNNTEAQPSSNGVSFVPFFGKVNEYRPFFGAGPGKPH 125
+PL V ++ + KS L P++ A P+ + P F K
Sbjct: 231 SPLPVMYSSSLKRLIKSMLRKNPEHRPTAAELLRHPHLQPYLAQCQNLSPVFKPVVSKSE 290
Query: 126 VNRFENQSPLPPIYRVINEHKVQNKKPYDYDYKVKSPEYNQHDNE 170
N EN++ LPP + N++ + + K K + D E
Sbjct: 291 HNTNENRTGLPPKTKSAKTPIKHNQESEETEKKNKDTSSSSKDKE 335
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/62 (20%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 145 HKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDYNHAQNYAFSYTVKDKDTGDDFSHSQ 204
H +N++ + + K E++QH + E + +++H +++ S+ ++ + D H
Sbjct: 563 HSHKNEEHHQHSDSHKHEEHHQHSDSHKHEEHHEHDH-HHHSHSHKHEECNHNHDHEHQS 621
Query: 205 HS 206
HS
Sbjct: 622 HS 623
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 30.3 bits (65), Expect = 3.0
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Query: 28 HYNYHAFDAERYLKS-LNLPV--PTKQGPVLFPNDAPPAPRTPLVVTSRPLIESIAKSDL 84
H+++H A+ + + LNLP P+ V PP P PL ++ S
Sbjct: 449 HHHHHEIPAKDSVDNPLNLPSDPPSSGDHVTLLPPPPPPPPPPLFTSTTSFSPSQPPPPP 508
Query: 85 NPLP--QNNTEAQPSSNGVSFVP--FFGKVNEYRPFFGAGPGKPHVNRFENQSPLPPIYR 140
P P + T PS P F + P P P + F N+ PL +++
Sbjct: 509 PPPPLFMSTTSFSPSQPPPPPPPPPLFTSTTSFSP--SQPPPPPPLPSFSNRDPLTTLHQ 566
Query: 141 VINE 144
IN+
Sbjct: 567 PINK 570
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Query: 57 PNDAPPAPRTPLVVTSRPLIESIAKSDLNPLPQNNTEAQPSSNGVS 102
P APPAP TP+V TS P P P P SNG+S
Sbjct: 710 PPPAPPAPPTPIVHTSSP-------PPPPPPPPPPAPPTPQSNGIS 748
>At5g26980.1 68418.m03219 syntaxin 41 (SYP41) / TLG2a identical to
SP|O65359 Syntaxin 41 (AtSYP41) (AtTLG2a) {Arabidopsis
thaliana}
Length = 322
Score = 29.9 bits (64), Expect = 4.0
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 343 DDYSSELNSNYPSYISKFKSFADDKINDNYQVVTSTS--KPNFDDIRNLLIDEKTYNTRQ 400
DD+ LN + S I K + + ++ + QVV S + D+ L+ID+ T R
Sbjct: 208 DDFGDMLNEHQMSKIKKSEEVSVEREKEIQQVVESVNDLAQIMKDLSALVIDQGTIVDRI 267
Query: 401 SYNDIEPNSQSTLKD 415
YN IE N +T++D
Sbjct: 268 DYN-IE-NVATTVED 280
>At3g03200.1 68416.m00316 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) {Arabidopsis thaliana}
Length = 479
Score = 29.9 bits (64), Expect = 4.0
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 280 YRKTNYDRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKE 339
+ +N + N+ + + +YD+ +I SN+ N + Y +K Q + D+ +
Sbjct: 281 FAASNSNHNNSVGDQVIHVGNYDEQLITSNRHMNQNYIYAFEKTGYIKEQKIRSSLDNTD 340
Query: 340 FYNDDYSSELNSN--YPSYISKFKSFADDKIN---DNYQVVTS 377
+ + N N ++S F + +D +N DN V T+
Sbjct: 341 EDPGFHGNNTNDNIDIDDFLS-FDIYNEDNVNQIEDNEDVNTN 382
>At5g60130.1 68418.m07538 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 300
Score = 29.5 bits (63), Expect = 5.3
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 302 DDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEFYNDDYSSELNSNYPSYISKFK 361
DDD + N +ND+D ++ A K+ N+ + D DD E + ++ S+
Sbjct: 122 DDDDSDYNCGEDNDSDDYADEAAVEKDDNDADDEDVDNVA-DDVPVEDDDYVEAFDSRDH 180
Query: 362 SFADDKINDNYQVVTSTSKPNFDDIRN 388
+ ADD D Q + P+F I N
Sbjct: 181 AKADDDDEDERQYLDDRENPSFTLILN 207
>At4g12250.1 68417.m01942 NAD-dependent epimerase/dehydratase family
protein similar to nucleotide sugar epimerase from
Vibrio vulnificus GI:3093975 [PID:g3093975], WbnF
[Escherichia coli] GI:5739472, CAPI protein
{Staphylococcus aureus} SP|P39858; contains Pfam profile
PF01370 NAD dependent epimerase/dehydratase family
Length = 436
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 50 KQGPVLFP----NDAPPAPRTPLVVTSRPLIESIAKSDLNPLPQN 90
K+GP +F + P P T LV L++ AK + PLP+N
Sbjct: 343 KKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKIMPLPRN 387
>At3g08790.1 68416.m01021 VHS domain-containing protein / GAT
domain-containing protein weak similarity to
HGF-regulated tyrosine kinase substrate [Mus musculus]
GI:1089781; contains Pfam profiles PF00790: VHS domain,
PF03127: GAT domain
Length = 607
Score = 29.5 bits (63), Expect = 5.3
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 61 PPAPRTPLVVTSRPLIESIAKSDLN---PLPQNNTEAQPSSNGVSFVPFFGKVNEYRPFF 117
PP P +P+ ++ SD N P +N A ++ FG ++ + ++
Sbjct: 332 PPQPSSPVAKPDNSIVLIDMLSDNNCESSTPTSNPHANHQKVQQNYSNGFGPGHQEQSYY 391
Query: 118 GAGPGKPHVNRFENQSPLPPIY 139
G G P N Q P P Y
Sbjct: 392 GQGSSAPVWNLQITQQPSSPAY 413
>At5g27960.1 68418.m03367 MADS-box protein (AGL90)
Length = 320
Score = 29.1 bits (62), Expect = 7.0
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 296 STTRSYDD-DVINSNKIANN-----DNDYGLN-DYAKLKNQNEYVNYDSKEFYNDDYSSE 348
STTR D + N + +A + D D N + + + N N +EFYN + +
Sbjct: 189 STTRVVDTPNATNPHVLAGDMTPFLDADANANMNQVQYQAPNNLFNQIQREFYNINLNLN 248
Query: 349 LNSNYPSYISKFKSFADDKINDNYQVVTSTSKPNFDD 385
LN N Y+++ +SF + + + V F D
Sbjct: 249 LNLNSNQYLNQQQSFMNPMVEQHMNHVGGRESIPFVD 285
>At3g58710.1 68416.m06543 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 272
Score = 29.1 bits (62), Expect = 7.0
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 387 RNLLIDEKTYNTRQSYNDIEPNSQSTLKDNSYNPVNFKKSNLYTNIDESIAITP 440
R I E ++YND+ P S S+ +D+ + KKS N+++ + P
Sbjct: 3 RRAAIQESDDEEDETYNDVVPESPSSCEDSKISKPTPKKSR--RNVEKRVVSVP 54
>At1g70370.1 68414.m08095 BURP domain-containing protein /
polygalacturonase, putative similar to polygalacturonase
isoenzyme 1 beta subunit [Lycopersicon esculentum]
GI:170480; contains Pfam profile PF03181: BURP domain
Length = 626
Score = 29.1 bits (62), Expect = 7.0
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 275 NVITDYRKTNYDRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNE--Y 332
+ T Y NNFNNY ++ + D N AN +D + YAK N + +
Sbjct: 278 DTFTSYGSDGNVPQNNFNNYGASGNAAVDTFANYRDKANVGDD-SFSSYAKDSNSEKVNF 336
Query: 333 VNY 335
VNY
Sbjct: 337 VNY 339
>At5g48310.1 68418.m05968 expressed protein
Length = 1156
Score = 28.7 bits (61), Expect = 9.3
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 287 RGNNFNNYISTTRSYDDDVINSNKIANNDNDYG------LNDYAKLKNQNEYV---NYDS 337
R +N ++ I T + +DD N N + +D G +DY + E V YD
Sbjct: 29 RNSNLSSPILVTPTLNDDESNDNMSIESVSDTGEGNELLFSDYDVEDEEEEEVIGRRYDE 88
Query: 338 KEFYNDDYSSELN 350
+E + D +S+LN
Sbjct: 89 EEVFGDKSNSKLN 101
>At5g26650.1 68418.m03175 MADS-box protein (AGL36) contains interpro
domain: IPR002100 transcriptor factor, MADS box;
contains Pfam profile PF00319: SRF-type transcription
factor (DNA-binding and dimerisation domain)
Length = 327
Score = 28.7 bits (61), Expect = 9.3
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 295 ISTTRSYDDDVINSNKIANNDNDYGLN-DYAKLKNQNEYVNYDSKEFYNDDYSSELNSNY 353
+ T + + V+ + D D N + + + N N +EFYN + + LN N
Sbjct: 196 VDTLNATNPHVLTGDMTPFLDADATANMNQVQYQAPNNLFNQIQREFYNINLNLNLNLNS 255
Query: 354 PSYISKFKSFADDKINDNYQVVTSTSKPNFDD 385
Y+++ +SF + + + V F D
Sbjct: 256 NQYLNQQQSFMNPMVEQHMNHVGGRESIPFVD 287
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 28.7 bits (61), Expect = 9.3
Identities = 24/102 (23%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Query: 46 PVPTKQGPVLFPNDAPPAPRTP--LVVTSRPLIESIAKSDLNPLPQNNTEAQPSSNGVSF 103
P P P P PP P P + + S P++ + +PL + + P +G+
Sbjct: 62 PPPMPMTPPPMPMTPPPMPMAPPPMPMASPPMMPMTPSTSPSPLTVPDMPSPPMPSGMES 121
Query: 104 VPFFGKVNEYRPFFGAGPGKPHVNRFENQSPLPPIYRVINEH 145
P G + P A P N N L + V+ H
Sbjct: 122 SPSPGPM---PPAMAASPDSGAFNVRNNVVTLSCVVGVVAAH 160
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 28.7 bits (61), Expect = 9.3
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 287 RGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEFYNDDYS 346
+GNN NN + + +D+ N+N NNDN+ G N K N N N + ND+
Sbjct: 68 QGNN-NNDGNNGNNNNDNNNNNNGNNNNDNNNGNN---KDNNNNGNNNNGNNNNGNDNNG 123
Query: 347 SELNSN 352
+ N N
Sbjct: 124 NNNNGN 129
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 140 RVINEHKVQNKKPYDYDYKVKSPEYNQHDNEIHD 173
R ++E K + +K D + KS EY +D E+HD
Sbjct: 201 RELDEEKEELRKYQQLDKQRKSLEYTIYDKELHD 234
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,923,113
Number of Sequences: 28952
Number of extensions: 631089
Number of successful extensions: 1552
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1529
Number of HSP's gapped (non-prelim): 49
length of query: 492
length of database: 12,070,560
effective HSP length: 84
effective length of query: 408
effective length of database: 9,638,592
effective search space: 3932545536
effective search space used: 3932545536
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
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