Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000166-TA|BGIBMGA000166-PA|IPR000618|Insect cuticle
protein
(492 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.52
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 32 0.90
02_01_0104 - 767490-767627,768025-768158,768971-769229,769315-76... 31 2.1
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196... 31 2.8
07_01_0862 - 7172083-7172931 31 2.8
11_06_0610 - 25449085-25453284 30 3.6
09_02_0203 - 5746068-5746307,5746469-5746729,5746833-5748239,574... 30 3.6
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 30 4.8
07_03_1160 - 24430240-24431268 30 4.8
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 30 4.8
03_05_0529 - 25297909-25298276,25300143-25300413,25300944-253010... 30 4.8
01_02_0059 - 10701859-10701963,10702034-10702153,10702534-107026... 29 6.4
12_02_0243 + 16237293-16237472,16238078-16238518 29 8.4
06_03_0649 + 23138442-23138842,23139576-23139849,23139929-231405... 29 8.4
03_06_0688 - 35559239-35559433,35560455-35560792,35561357-355617... 29 8.4
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 33.1 bits (72), Expect = 0.52
Identities = 24/78 (30%), Positives = 26/78 (33%)
Query: 28 HYNYHAFDAERYLKSLNLPVPTKQGPVLFPNDAPPAPRTPLVVTSRPLIESIAKSDLNPL 87
H H D E+ L N P GP P DAPP P P P + L P
Sbjct: 1104 HDLQHEIDREQALADQNELPPLPDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPS 1163
Query: 88 PQNNTEAQPSSNGVSFVP 105
P T P S P
Sbjct: 1164 PPPATPPPPPPLSPSLPP 1181
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 41 KSLNLPVPTKQGPVLFPNDAPPAPRTP 67
+ N P P QGPVL P DAPP P P
Sbjct: 239 QGFNSPPPPGQGPVL-PRDAPPMPPPP 264
>02_01_0104 -
767490-767627,768025-768158,768971-769229,
769315-769403,769624-769774,769860-770003,
770611-770730,771490-771658,771789-772087
Length = 500
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 2 ILLLIILVGQSRCQEVTTPSSLLGPKHYNYHAFDAERYLKSLNLPVPTKQGP 53
++LL++++ S C E L P+ + A AER ++SLNL +P + GP
Sbjct: 8 LILLVVVLAASACAE-----GLRLPRDAKFPAAQAERLIRSLNL-LPKEAGP 53
>09_02_0602 -
11118788-11119178,11119262-11119451,11119590-11119658,
11119890-11120016,11120134-11120399,11120760-11120872,
11121693-11121764,11121860-11121998,11124277-11124360,
11125278-11125771,11127604-11128187
Length = 842
Score = 30.7 bits (66), Expect = 2.8
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 313 NNDNDYG-LNDYAKLKNQNEYVNYDSKEFYNDDYSSELNSNYPSYISKFKSFADDKINDN 371
+N N +G +++ L EY+N + SS +N S++ +F + I DN
Sbjct: 437 SNSNLHGSISNNFTLLTALEYLNLSGNQLSGTIPSSLCENNAGSFVFRFSYLFNVDIGDN 496
Query: 372 YQVVTSTSKPNFDDIRNLLID-----EKTYNTRQSYNDIE 406
+ + ST P F + + +KT N R +Y ++E
Sbjct: 497 FVHLDSTYGPEFLNAPGSTKNHWDHMQKTENRRFTYEELE 536
>07_01_0862 - 7172083-7172931
Length = 282
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 45 LPVPTKQGPVLFPNDAPPAPRTPLVVTSRPLIESIAKSDLNPLP 88
LP+P ++ P+L+P PP + PL S P + + + PLP
Sbjct: 161 LPLPPRKKPLLYPPPLPP-KKKPLPPPSPPPQPPLPEKENTPLP 203
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.3 bits (65), Expect = 3.6
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 46 PVP-TKQGPVLFPNDAPPAP--RTPLVVTSRPLIESIAKSDLNPLPQNNTEAQPSS 98
P P +K P P + P+P TP S P ES A S P P+ +T + P S
Sbjct: 588 PTPESKASPPPTPEEYTPSPPKSTPPAEKSPPTPESKASSPPPPAPEGHTPSPPES 643
>09_02_0203 -
5746068-5746307,5746469-5746729,5746833-5748239,
5748588-5748714,5748800-5749119,5749202-5749963,
5750749-5750898,5751007-5751096,5751196-5751340,
5751440-5751617,5751753-5752448,5752555-5752753
Length = 1524
Score = 30.3 bits (65), Expect = 3.6
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 326 LKNQNEYVNYDSKEFYNDDYSSELNSNYPSYISKFKSFADDKINDNYQVVTSTSKPNFDD 385
L + EYVN D +F + + S ++ S I + +AD K++D+ + + +S P D
Sbjct: 576 LASDGEYVNQD--DFVDPEKSVCMHD---SKIETSREYADRKLDDSNNIQSYSSLPVPDP 630
Query: 386 IRNLLID 392
RNL+ D
Sbjct: 631 SRNLIGD 637
>10_08_0259 +
16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 160 KSPEYNQHDNEIHDENNSDYNHAQNYAFSYTVKDKDTGDDFSHSQHSRG 208
K+ EY +N++H+E ++ + ++N ++ Y +++ D + S S G
Sbjct: 56 KAHEYGTMENDLHEEASTTDDDSENDSYEYLLRESD-NEQTSESDAGEG 103
>07_03_1160 - 24430240-24431268
Length = 342
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 46 PVPTKQGPVLFPNDAPPAPRT--PLVVTSRPLIESIA--KSDLNPLPQNNTEAQPSSNG 100
P+P P + D PP P+ P + +P + K D PLP N QP+ NG
Sbjct: 74 PLPNPDVPPMNKPDVPPMPKPDGPPIPPVQPCPDQPPQPKPDGPPLPNPNQPPQPNPNG 132
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 29.9 bits (64), Expect = 4.8
Identities = 15/73 (20%), Positives = 35/73 (47%)
Query: 144 EHKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDYNHAQNYAFSYTVKDKDTGDDFSHS 203
E +V+ +KP +D + K ++ D+ D +++ + + + + SY+ DT H
Sbjct: 158 EKRVKTQKPPTHDKQKKKRKHYSSDSYSSDYSDTQSSDSGSESESYSSSSLDTSSSSDHR 217
Query: 204 QHSRGAATNGEYR 216
R ++ ++R
Sbjct: 218 HKRRKSSKKDKHR 230
>03_05_0529 -
25297909-25298276,25300143-25300413,25300944-25301019,
25302221-25302311,25304134-25304206
Length = 292
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 153 YDYDYKVKSPEYNQHDNEIHDENNSDYN 180
YD++Y P+Y E DENN +N
Sbjct: 253 YDWEYDPSHPDYQNDSGEALDENNFKWN 280
>01_02_0059 -
10701859-10701963,10702034-10702153,10702534-10702609,
10702897-10703276
Length = 226
Score = 29.5 bits (63), Expect = 6.4
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 45 LPVPTKQG--PVLFPNDAPPAPRTPLVVTSRPLIESIAKSDLNPLPQNNTEAQPSSNGVS 102
LP P+ + PV P P P P + R L+ A+ +P P +++ +PS+ S
Sbjct: 41 LPPPSSRASSPVELPRIVPYRP-APSQIDCRRLVRRQARPPPSPPPSSSSAVEPSAAESS 99
Query: 103 FV-PFFGKVNEYRPFF 117
V F PFF
Sbjct: 100 AVESFAASAGRRSPFF 115
>12_02_0243 + 16237293-16237472,16238078-16238518
Length = 206
Score = 29.1 bits (62), Expect = 8.4
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 271 TDYIN-VITDYRKTNY----DRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAK 325
T+Y N VIT+ TN +R N+ N + + + D +NS K + NDY L D
Sbjct: 106 TEYTNQVITETENTNQSNGMERANHVNEMDVSQQLVEQDNMNSQKSSTELNDY-LQDETV 164
Query: 326 LKNQNEY 332
+Q ++
Sbjct: 165 PMDQKDF 171
>06_03_0649 +
23138442-23138842,23139576-23139849,23139929-23140562,
23140771-23140826,23141178-23141282,23141295-23141535,
23142686-23142690
Length = 571
Score = 29.1 bits (62), Expect = 8.4
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 6/103 (5%)
Query: 46 PVPTKQGPVLFPNDAPPAPRTPLVVTSRPLIESIAKSDLNPLPQNNTEAQPSSNGVSFVP 105
P P + P+ P+ P+P P TS + S + P PQ S+ +F
Sbjct: 69 PRPPQSSPIFVPDSPNPSPAAP---TSS--LASGTSTARPPQPQGGGWGPTSTISPNFAS 123
Query: 106 FFGKVNEYRPFFGAG-PGKPHVNRFENQSPLPPIYRVINEHKV 147
FFG + G P VN + P P + N H V
Sbjct: 124 FFGNQQDPNSCLVRGYPPGGFVNFIQQNCPPQPQQQGENFHFV 166
>03_06_0688 -
35559239-35559433,35560455-35560792,35561357-35561785,
35562014-35562110,35562314-35562438,35562758-35562908
Length = 444
Score = 29.1 bits (62), Expect = 8.4
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 20 PSSLLGPKHYNYHAFDAERYLKSLNLPVPTKQGPVLFPNDAPPAPRTPLVVTSRPLIESI 79
P + +++ +AF + L L+L VP Q PVL P PRT LV+ L E++
Sbjct: 217 PDETVELDYFDPYAFIKD--LPDLSLVVPKFQ-PVLLPKQTRSCPRTTLVL---DLDETL 270
Query: 80 AKSDLNP 86
S L P
Sbjct: 271 VHSTLEP 277
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,010,704
Number of Sequences: 37544
Number of extensions: 701587
Number of successful extensions: 1395
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1378
Number of HSP's gapped (non-prelim): 26
length of query: 492
length of database: 14,793,348
effective HSP length: 85
effective length of query: 407
effective length of database: 11,602,108
effective search space: 4722057956
effective search space used: 4722057956
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -