Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000166-TA|BGIBMGA000166-PA|IPR000618|Insect cuticle
protein
(492 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr... 36 0.086
Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical pr... 36 0.086
AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein. 36 0.086
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein. 36 0.086
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 33 0.61
AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical ... 32 0.80
AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical ... 32 1.1
Z66513-13|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 31 1.4
Z66513-12|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 31 1.4
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 1.8
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 1.8
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 1.8
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 30 4.3
Z32683-15|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 30 4.3
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 30 4.3
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 30 4.3
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 30 4.3
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 30 4.3
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 30 4.3
AF043699-4|AAB97568.1| 610|Caenorhabditis elegans Serotonin/oct... 30 4.3
U40955-6|AAA81754.1| 539|Caenorhabditis elegans Hypothetical pr... 29 5.6
U29612-1|AAA68801.1| 387|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans Hypothetical ... 29 5.6
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans Hypothetical ... 29 5.6
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 29 5.6
Z83105-9|CAB05489.1| 199|Caenorhabditis elegans Hypothetical pr... 29 7.5
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 29 7.5
AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical... 29 7.5
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 9.9
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 29 9.9
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 29 9.9
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 29 9.9
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 29 9.9
U97015-4|AAB52342.1| 245|Caenorhabditis elegans Hypothetical pr... 29 9.9
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 29 9.9
L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical pr... 29 9.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 9.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 9.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 9.9
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 29 9.9
>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
protein C34B4.1b protein.
Length = 1099
Score = 35.5 bits (78), Expect = 0.086
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 134 PLPP-IYRVINEHKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDYNHAQNYAFSYTVK 192
PLP I+ E N DY+Y ++ + +H+ ++ +EN ++ + F +K
Sbjct: 148 PLPRRIHPTATERDSLNSYAEDYEYDIEESSFERHEEQVRNENEKYVDYVNLHEF-VAIK 206
Query: 193 DKDTGDDFSHSQHSRGAATNGEYRVRLP 220
D D +S+ + +T EY LP
Sbjct: 207 D----DKVVYSEIVKHRSTEKEYLPALP 230
>Z78059-4|CAB01487.2| 995|Caenorhabditis elegans Hypothetical
protein C34B4.1a protein.
Length = 995
Score = 35.5 bits (78), Expect = 0.086
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 134 PLPP-IYRVINEHKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDYNHAQNYAFSYTVK 192
PLP I+ E N DY+Y ++ + +H+ ++ +EN ++ + F +K
Sbjct: 44 PLPRRIHPTATERDSLNSYAEDYEYDIEESSFERHEEQVRNENEKYVDYVNLHEF-VAIK 102
Query: 193 DKDTGDDFSHSQHSRGAATNGEYRVRLP 220
D D +S+ + +T EY LP
Sbjct: 103 D----DKVVYSEIVKHRSTEKEYLPALP 126
>AY084081-1|AAM08091.1| 1045|Caenorhabditis elegans MAX-1B protein.
Length = 1045
Score = 35.5 bits (78), Expect = 0.086
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 134 PLPP-IYRVINEHKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDYNHAQNYAFSYTVK 192
PLP I+ E N DY+Y ++ + +H+ ++ +EN ++ + F +K
Sbjct: 94 PLPRRIHPTATERDSLNSYAEDYEYDIEESSFERHEEQVRNENEKYVDYVNLHEF-VAIK 152
Query: 193 DKDTGDDFSHSQHSRGAATNGEYRVRLP 220
D D +S+ + +T EY LP
Sbjct: 153 D----DKVVYSEIVKHRSTEKEYLPALP 176
>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
Length = 1099
Score = 35.5 bits (78), Expect = 0.086
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 134 PLPP-IYRVINEHKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDYNHAQNYAFSYTVK 192
PLP I+ E N DY+Y ++ + +H+ ++ +EN ++ + F +K
Sbjct: 148 PLPRRIHPTATERDSLNSYAEDYEYDIEESSFERHEEQVRNENEKYVDYVNLHEF-VAIK 206
Query: 193 DKDTGDDFSHSQHSRGAATNGEYRVRLP 220
D D +S+ + +T EY LP
Sbjct: 207 D----DKVVYSEIVKHRSTEKEYLPALP 230
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 32.7 bits (71), Expect = 0.61
Identities = 25/123 (20%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 299 RSYDDDVINSNKIANNDNDYGLNDYAKLKN-QNEYVNYDSKEFYNDDYSSELNSNYPSYI 357
+++ VI N+ + + + + +L + +N+++ +++ + D ++++N +Y
Sbjct: 440 KTFKVSVIAENENRSMEKTFNIEGLFELDHVENQFLTVENEVSFGFD-CCDVDTNLCTYT 498
Query: 358 SKFKSFADDKINDNYQVVTSTSKPNFDDIRNLLIDEKTYNTRQSYNDIEPNSQSTLKDNS 417
+F+D+ D + + S N I N LID +Y T+ N ++ N L N
Sbjct: 499 L---TFSDEMSADQPVLESQASTKNDPSIMNKLIDLTSYLTKPFLNILQSNFNYMLNGNW 555
Query: 418 YNP 420
+ P
Sbjct: 556 FYP 558
>AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical
protein Y75B8A.3 protein.
Length = 827
Score = 32.3 bits (70), Expect = 0.80
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Query: 271 TDYINVITDYRKTNYDRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQN 330
T Y N + + D+G+ N Y + + + + SN +N N YG + + +NQ
Sbjct: 517 TTYQNQNQNQQGVQRDQGSYQNQYSNQNQQQPREYLLSN---HNQNQYGSSGQNQNQNQQ 573
Query: 331 EYVNYDSKEFY-NDDYSSELNSNYPSYISKFKSFADDKINDNYQVVTSTSK 380
Y + Y N S +N+NY + + +N N VT S+
Sbjct: 574 TSNQYQNNGVYTNVTQYSNVNNNYGYQRDQPATTGMQTVNGNGNGVTDFSQ 624
>AC024853-4|AAK68586.1| 746|Caenorhabditis elegans Hypothetical
protein Y71F9AR.3 protein.
Length = 746
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 306 INSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEFYND--DYSSELNSNYPSYISKFKSF 363
++ NKI + D+D +D +L + VN+D+ F N+ SE ++ PS S+F +
Sbjct: 152 LSLNKIYDEDSDQNESDEEQLPQAYDIVNHDADFFANELPSTPSEREASPPS-SSQFSNS 210
Query: 364 ADDKINDNYQVVTSTSK 380
A + + Q T+T +
Sbjct: 211 AAPNLPETKQPPTTTDQ 227
>Z66513-13|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 56 FPNDAPPAPRTPLVVTSRPLIESIAKSDLNPLPQNNTEAQPSSNGVS 102
F N APP+ TP+ +TS I SD++ L N+ QP+S G++
Sbjct: 369 FMNSAPPSSNTPMTMTSGAGESLINPSDVSFL--QNSFLQPTSQGLT 413
>Z66513-12|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 56 FPNDAPPAPRTPLVVTSRPLIESIAKSDLNPLPQNNTEAQPSSNGVS 102
F N APP+ TP+ +TS I SD++ L N+ QP+S G++
Sbjct: 304 FMNSAPPSSNTPMTMTSGAGESLINPSDVSFL--QNSFLQPTSQGLT 348
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 31.1 bits (67), Expect = 1.8
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 16 EVTTPSSLLG----PKHYNYHAFDAERYLKSLNLPVPTKQGPVLFPNDAPP--AP----- 64
++ TP+ LG P N H +L PVP ++ P + + PP AP
Sbjct: 933 DLRTPTKPLGQNVTPTSTNNHEIAQSTRSPALPPPVPPREAPPIPKRNPPPLGAPPKVPE 992
Query: 65 --RTPLVVTSRPLIESIAKSDL-NPLPQNNTEAQPSS 98
R P + RP +++ A + L NN AQPSS
Sbjct: 993 GARAPPPLPPRPKVKTTAVDETPQNLVPNNQPAQPSS 1029
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 31.1 bits (67), Expect = 1.8
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 16 EVTTPSSLLG----PKHYNYHAFDAERYLKSLNLPVPTKQGPVLFPNDAPP--AP----- 64
++ TP+ LG P N H +L PVP ++ P + + PP AP
Sbjct: 933 DLRTPTKPLGQNVTPTSTNNHEIAQSTRSPALPPPVPPREAPPIPKRNPPPLGAPPKVPE 992
Query: 65 --RTPLVVTSRPLIESIAKSDL-NPLPQNNTEAQPSS 98
R P + RP +++ A + L NN AQPSS
Sbjct: 993 GARAPPPLPPRPKVKTTAVDETPQNLVPNNQPAQPSS 1029
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 31.1 bits (67), Expect = 1.8
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 16 EVTTPSSLLG----PKHYNYHAFDAERYLKSLNLPVPTKQGPVLFPNDAPP--AP----- 64
++ TP+ LG P N H +L PVP ++ P + + PP AP
Sbjct: 933 DLRTPTKPLGQNVTPTSTNNHEIAQSTRSPALPPPVPPREAPPIPKRNPPPLGAPPKVPE 992
Query: 65 --RTPLVVTSRPLIESIAKSDL-NPLPQNNTEAQPSS 98
R P + RP +++ A + L NN AQPSS
Sbjct: 993 GARAPPPLPPRPKVKTTAVDETPQNLVPNNQPAQPSS 1029
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 408 NSQSTLKDNSYNPVNFKKSNLYTNIDESIAITPRNFVTNPFVATTPSSYLVSTITN 463
NSQ+TLK N + S + IDE + + +V NP + + P S++ N
Sbjct: 69 NSQNTLK---INVIGLADSTVRVQIDEPESAIRKRYVPNPALVSLPEELEFSSVEN 121
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 408 NSQSTLKDNSYNPVNFKKSNLYTNIDESIAITPRNFVTNPFVATTPSSYLVSTITN 463
NSQ+TLK N + S + IDE + + +V NP + + P S++ N
Sbjct: 83 NSQNTLK---INVIGLADSTVRVQIDEPESAIRKRYVPNPALVSLPEELEFSSVEN 135
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 29.9 bits (64), Expect = 4.3
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 125 HVNRFENQSPLPPIYRVINEHKV-QNKKPYDY---DYKVKSPEY--NQHDNEIHDENNSD 178
H ++ E Q P +V++EH + Q+ +PY ++ V S ++ +QH HD ++
Sbjct: 313 HHHKLEEQVP-----QVVHEHVIEQHYEPYQIVHENHNVLSVDFGEDQHSITHHDHDHHH 367
Query: 179 YNHAQNYAFSYTVKDKDTGDDFSHSQHSR 207
++H + ++T K + + + + SR
Sbjct: 368 HHHESHVTHTFTSNVKQSRSNTASTYQSR 396
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 29.9 bits (64), Expect = 4.3
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 125 HVNRFENQSPLPPIYRVINEHKV-QNKKPYDY---DYKVKSPEY--NQHDNEIHDENNSD 178
H ++ E Q P +V++EH + Q+ +PY ++ V S ++ +QH HD ++
Sbjct: 313 HHHKLEEQVP-----QVVHEHVIEQHYEPYQIVHENHNVLSVDFGEDQHSITHHDHDHHH 367
Query: 179 YNHAQNYAFSYTVKDKDTGDDFSHSQHSR 207
++H + ++T K + + + + SR
Sbjct: 368 HHHESHVTHTFTSNVKQSRSNTASTYQSR 396
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 29.9 bits (64), Expect = 4.3
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 125 HVNRFENQSPLPPIYRVINEHKV-QNKKPYDY---DYKVKSPEY--NQHDNEIHDENNSD 178
H ++ E Q P +V++EH + Q+ +PY ++ V S ++ +QH HD ++
Sbjct: 313 HHHKLEEQVP-----QVVHEHVIEQHYEPYQIVHENHNVLSVDFGEDQHSITHHDHDHHH 367
Query: 179 YNHAQNYAFSYTVKDKDTGDDFSHSQHSR 207
++H + ++T K + + + + SR
Sbjct: 368 HHHESHVTHTFTSNVKQSRSNTASTYQSR 396
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 29.9 bits (64), Expect = 4.3
Identities = 20/93 (21%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 155 YDYKVKSPEYNQHDNEIHDENNSDYNHAQNYAFSYTVKDKDTGDDFSHSQHSRGAATNGE 214
+ Y +YN + N++ + ++S+YN Q + + + + T D ++H Q++
Sbjct: 424 HPYNNHHQQYNPY-NQVLENSSSEYNPRQQESRNASYINISTFDGYNHHQYNGHHERANS 482
Query: 215 YRVRLPDGRMQIVSYTADENGYNAEVRYDDEDK 247
Y + R S+ + +G AE Y+ D+
Sbjct: 483 YNPYPENSRN--FSHQSQHSGRQAEQPYNSYDQ 513
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 58 NDAPPAPRTPLVVTSRPLIESIAK--SDLNPLPQNNTEAQPSSNGVSFVPFFGKVNEYRP 115
++ P P TP VT + I S N P NN+ P++N FVP ++
Sbjct: 133 SNGTPTP-TPGSVTGSNMTNPIGSPASTPNRFPSNNSANLPTTN---FVPQTSQMYAGLS 188
Query: 116 FFGAGPGKPHVNRFENQSPLPPIYRVINEHKVQNKKPYDYDY 157
P + + +P P + H Q + PYD+ Y
Sbjct: 189 QPAMDPYSFGIANGFSMAPYPQVTDFQPHHMFQGRSPYDFPY 230
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 58 NDAPPAPRTPLVVTSRPLIESIAK--SDLNPLPQNNTEAQPSSNGVSFVPFFGKVNEYRP 115
++ P P TP VT + I S N P NN+ P++N FVP ++
Sbjct: 106 SNGTPTP-TPGSVTGSNMTNPIGSPASTPNRFPSNNSANLPTTN---FVPQTSQMYAGLS 161
Query: 116 FFGAGPGKPHVNRFENQSPLPPIYRVINEHKVQNKKPYDYDY 157
P + + +P P + H Q + PYD+ Y
Sbjct: 162 QPAMDPYSFGIANGFSMAPYPQVTDFQPHHMFQGRSPYDFPY 203
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 58 NDAPPAPRTPLVVTSRPLIESIAK--SDLNPLPQNNTEAQPSSNGVSFVPFFGKVNEYRP 115
++ P P TP VT + I S N P NN+ P++N FVP ++
Sbjct: 292 SNGTPTP-TPGSVTGSNMTNPIGSPASTPNRFPSNNSANLPTTN---FVPQTSQMYAGLS 347
Query: 116 FFGAGPGKPHVNRFENQSPLPPIYRVINEHKVQNKKPYDYDY 157
P + + +P P + H Q + PYD+ Y
Sbjct: 348 QPAMDPYSFGIANGFSMAPYPQVTDFQPHHMFQGRSPYDFPY 389
>Z32683-15|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 29.9 bits (64), Expect = 4.3
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 290 NFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEFY-NDDYSSE 348
+F+ S+T +++S I +D D A L E N+DS + Y + D SE
Sbjct: 317 SFSQSYSSTTDTSSAMLDSESIIITSSDPDA-DNADLDRNIEKFNWDSDDLYRSTDTDSE 375
Query: 349 LNSNYPSYISKFKSFADDKINDNYQVVTSTSKP 381
+ N Y+S + + DK+ + VV + P
Sbjct: 376 V-ENLLDYLSTAMNIS-DKVFSEFMVVGEETTP 406
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 29.9 bits (64), Expect = 4.3
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 290 NFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKEFY-NDDYSSE 348
+F+ S+T +++S I +D D A L E N+DS + Y + D SE
Sbjct: 317 SFSQSYSSTTDTSSAMLDSESIIITSSDPDA-DNADLDRNIEKFNWDSDDLYRSTDTDSE 375
Query: 349 LNSNYPSYISKFKSFADDKINDNYQVVTSTSKP 381
+ N Y+S + + DK+ + VV + P
Sbjct: 376 V-ENLLDYLSTAMNIS-DKVFSEFMVVGEETTP 406
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 58 NDAPPAPRTPLVVTSRPLIESIAK--SDLNPLPQNNTEAQPSSNGVSFVPFFGKVNEYRP 115
++ P P TP VT + I S N P NN+ P++N FVP ++
Sbjct: 98 SNGTPTP-TPGSVTGSNMTNPIGSPASTPNRFPSNNSANLPTTN---FVPQTSQMYAGLS 153
Query: 116 FFGAGPGKPHVNRFENQSPLPPIYRVINEHKVQNKKPYDYDY 157
P + + +P P + H Q + PYD+ Y
Sbjct: 154 QPAMDPYSFGIANGFSMAPYPQVTDFQPHHMFQGRSPYDFPY 195
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 58 NDAPPAPRTPLVVTSRPLIESIAK--SDLNPLPQNNTEAQPSSNGVSFVPFFGKVNEYRP 115
++ P P TP VT + I S N P NN+ P++N FVP ++
Sbjct: 292 SNGTPTP-TPGSVTGSNMTNPIGSPASTPNRFPSNNSANLPTTN---FVPQTSQMYAGLS 347
Query: 116 FFGAGPGKPHVNRFENQSPLPPIYRVINEHKVQNKKPYDYDY 157
P + + +P P + H Q + PYD+ Y
Sbjct: 348 QPAMDPYSFGIANGFSMAPYPQVTDFQPHHMFQGRSPYDFPY 389
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 58 NDAPPAPRTPLVVTSRPLIESIAK--SDLNPLPQNNTEAQPSSNGVSFVPFFGKVNEYRP 115
++ P P TP VT + I S N P NN+ P++N FVP ++
Sbjct: 133 SNGTPTP-TPGSVTGSNMTNPIGSPASTPNRFPSNNSANLPTTN---FVPQTSQMYAGLS 188
Query: 116 FFGAGPGKPHVNRFENQSPLPPIYRVINEHKVQNKKPYDYDY 157
P + + +P P + H Q + PYD+ Y
Sbjct: 189 QPAMDPYSFGIANGFSMAPYPQVTDFQPHHMFQGRSPYDFPY 230
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 29.9 bits (64), Expect = 4.3
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 58 NDAPPAPRTPLVVTSRPLIESIAK--SDLNPLPQNNTEAQPSSNGVSFVPFFGKVNEYRP 115
++ P P TP VT + I S N P NN+ P++N FVP ++
Sbjct: 121 SNGTPTP-TPGSVTGSNMTNPIGSPASTPNRFPSNNSANLPTTN---FVPQTSQMYAGLS 176
Query: 116 FFGAGPGKPHVNRFENQSPLPPIYRVINEHKVQNKKPYDYDY 157
P + + +P P + H Q + PYD+ Y
Sbjct: 177 QPAMDPYSFGIANGFSMAPYPQVTDFQPHHMFQGRSPYDFPY 218
>AF043699-4|AAB97568.1| 610|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 3 protein.
Length = 610
Score = 29.9 bits (64), Expect = 4.3
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 7/90 (7%)
Query: 272 DYINVITDYRKTNYDRGNN-FNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQN 330
D +N Y T + GN + I +RS D + N D D + N N
Sbjct: 375 DSMNGTNSYSATPHKSGNEELGSLIENSRSSSTDSNEKTEQLTNQTD----DNFSMSNNN 430
Query: 331 EYVNYDSKEFYNDDYSSELNSNYPSYISKF 360
N D KE +++ SE S SKF
Sbjct: 431 N--NGDEKEAFDESLLSESKKKSKSLASKF 458
>U40955-6|AAA81754.1| 539|Caenorhabditis elegans Hypothetical
protein F48B9.1 protein.
Length = 539
Score = 29.5 bits (63), Expect = 5.6
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 347 SELNSNYPSYISKFKSFADDKINDNYQVVTSTSKPNFDDIRNLLIDEKTYNTRQSYNDIE 406
SE S S I K KS + K N + S S PN + +NL+I+ KT + +
Sbjct: 408 SETVSPAASPIVKTKSRKEKKTNQQ-MLKGSASSPNMNS-QNLIINRKTTEADVENDKPK 465
Query: 407 PNSQSTLKDNSYNPVN 422
PN+ T + + + VN
Sbjct: 466 PNTNRTFEVVTVSVVN 481
>U29612-1|AAA68801.1| 387|Caenorhabditis elegans Hypothetical
protein C09B8.3 protein.
Length = 387
Score = 29.5 bits (63), Expect = 5.6
Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Query: 131 NQSPLPPIYRVINEHKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDYNHAQNYAFSYT 190
NQ PI+ VI +H+ + Y + + D+E + S+++ A S
Sbjct: 268 NQKSGGPIFNVIQKHENNGDENYQLERGICMNRRPSIDSENSHQPMSEHSECTADASSIA 327
Query: 191 VKDKDTGDDFSHSQHSRGAATNGEYRVRLPDGRMQIVSYTADEN 234
+ +T +S+ +TN +V + DG++ A N
Sbjct: 328 SGENET-KRHGFENYSKEQSTNNTAKVTIDDGQLSTDRVIARRN 370
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans Hypothetical
protein C18G1.4b protein.
Length = 628
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 32 HAFDAERYLKSLNLPVPTKQGPVLFPNDAPPAPRTPLVVTSR-PLIESIAKSD-----LN 85
H E+ N P+ PV F +D +P + + + +E + D ++
Sbjct: 449 HDVIPEKLNAEKNDNTPSTASPVQFSSDGWDSPTKSVALPPKISTLEEEQEEDTTITKVS 508
Query: 86 PLPQNNTEAQPSSNGVSFVPFFGKVNEYR-PFFGAGP 121
P PQ T S + VP VNEY+ FGA P
Sbjct: 509 PQPQERTGTAWGSGDATPVPLATPVNEYKVSGFGAAP 545
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans Hypothetical
protein C18G1.4a protein.
Length = 693
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 32 HAFDAERYLKSLNLPVPTKQGPVLFPNDAPPAPRTPLVVTSR-PLIESIAKSD-----LN 85
H E+ N P+ PV F +D +P + + + +E + D ++
Sbjct: 514 HDVIPEKLNAEKNDNTPSTASPVQFSSDGWDSPTKSVALPPKISTLEEEQEEDTTITKVS 573
Query: 86 PLPQNNTEAQPSSNGVSFVPFFGKVNEYR-PFFGAGP 121
P PQ T S + VP VNEY+ FGA P
Sbjct: 574 PQPQERTGTAWGSGDATPVPLATPVNEYKVSGFGAAP 610
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 29.5 bits (63), Expect = 5.6
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Query: 32 HAFDAERYLKSLNLPVPTKQGPVLFPNDAPPAPRTPLVVTSR-PLIESIAKSD-----LN 85
H E+ N P+ PV F +D +P + + + +E + D ++
Sbjct: 514 HDVIPEKLNAEKNDNTPSTASPVQFSSDGWDSPTKSVALPPKISTLEEEQEEDTTITKVS 573
Query: 86 PLPQNNTEAQPSSNGVSFVPFFGKVNEYR-PFFGAGP 121
P PQ T S + VP VNEY+ FGA P
Sbjct: 574 PQPQERTGTAWGSGDATPVPLATPVNEYKVSGFGAAP 610
>Z83105-9|CAB05489.1| 199|Caenorhabditis elegans Hypothetical
protein F14H3.9 protein.
Length = 199
Score = 29.1 bits (62), Expect = 7.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 384 DDIRNLLIDEKTYNTRQSYNDIEPNSQSTLKDNS--YNPVNFKKSNLYTNIDE 434
D IRN+ KT NT ++YN N +T + S Y+P F K Y+ +
Sbjct: 27 DTIRNICEKLKTENTTENYNAFLDNIPTTPANESDCYDPFYFFKHLRYSQFGD 79
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 29.1 bits (62), Expect = 7.5
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 285 YDRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKE--FYN 342
Y + NNF Y + N NN+ Y N Y N ++++ FYN
Sbjct: 19 YQQQNNFQQYYGYPQQQQQGNQYYNNNNNNNGYYNQQQQQFNGYNNNYNNNNNQQQQFYN 78
Query: 343 DDYSSELNSNY 353
++ ++ N+NY
Sbjct: 79 NNNNNYNNNNY 89
>AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical
protein B0238.9 protein.
Length = 472
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 310 KIANNDNDYGLNDYAKLKNQNEYVNYDSKEFYNDDYSSELNS 351
+I+ + N GL+ + ++N NE VNY+ FY + S+ + S
Sbjct: 332 RISEHLNALGLSIMSPVENANENVNYEESPFYPELTSTPIVS 373
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 9.9
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 42 SLNLPVPTKQGPVLFPNDAPPAPRTPLVVTSRPLIESIAKSDLNPLPQNNTEAQPSSNGV 101
++ P+ T+Q + PP T L + S+A S +P P T P++ +
Sbjct: 111 TVGAPITTQQVLITETTTQPPTTTTTLETPAPESTPSMAPSHTDPTPAPETTVAPTTKYL 170
Query: 102 SFVPFFGKVNEYRPFFGAGPGKPHVNRF 129
P + ++ + F G+P +N F
Sbjct: 171 R--PERKQTSKAKYFNPCAVGQPLLNEF 196
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 28.7 bits (61), Expect = 9.9
Identities = 32/156 (20%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 280 YRKTNYDRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVNYDSKE 339
Y +T +RGN F++ + + + N + + NN + +++ K +Y +DS +
Sbjct: 141 YEETISERGNEFDDCLPGCSN--SHLPNYDHVENNYLPTANSFHSEEKFPQDYTAWDSGD 198
Query: 340 FYNDDYS--SELNSNYPSYISKFKSFADDKINDNYQVVTSTSKPNFDDIRNLLIDEKTYN 397
+ DD+S ++ S + +D+I ++ T T+K D + N
Sbjct: 199 NFYDDFSFLEQVGHEEVVETSYGDGYQEDEIIESTCTFTETAK-----------DFQAAN 247
Query: 398 TRQSYNDIEPNSQSTLKDNSYNPVNFKKSNLYTNID 433
Q+++ E N + T+ ++ N +KS L ++
Sbjct: 248 KHQTFSKQE-NVEDTIFEDMDQSDNQEKSELLDEVE 282
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 28.7 bits (61), Expect = 9.9
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 338 KEFYND--DYSSELNSNYPSYISKFKSFADDKINDNYQVV-TSTSKPNFDDIRNLLIDEK 394
++ YN+ YSS SNYPS +++ +D+ S N + + +L +
Sbjct: 22 QQSYNETRQYSSNATSNYPSQTQQYQQQQHQYQSDHSNAQRLLNSGYNTNQVDYVLGHKD 81
Query: 395 TYNTRQSYNDIEPNSQSTLKDNSYNPVNFKKSN 427
YN Y NS +T +NS + + S+
Sbjct: 82 KYNEGPHYQPPIINSSATAANNSSSSTHHYNSS 114
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 28.7 bits (61), Expect = 9.9
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 338 KEFYND--DYSSELNSNYPSYISKFKSFADDKINDNYQVV-TSTSKPNFDDIRNLLIDEK 394
++ YN+ YSS SNYPS +++ +D+ S N + + +L +
Sbjct: 441 QQSYNETRQYSSNATSNYPSQTQQYQQQQHQYQSDHSNAQRLLNSGYNTNQVDYVLGHKD 500
Query: 395 TYNTRQSYNDIEPNSQSTLKDNSYNPVNFKKSN 427
YN Y NS +T +NS + + S+
Sbjct: 501 KYNEGPHYQPPIINSSATAANNSSSSTHHYNSS 533
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 28.7 bits (61), Expect = 9.9
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 338 KEFYND--DYSSELNSNYPSYISKFKSFADDKINDNYQVV-TSTSKPNFDDIRNLLIDEK 394
++ YN+ YSS SNYPS +++ +D+ S N + + +L +
Sbjct: 606 QQSYNETRQYSSNATSNYPSQTQQYQQQQHQYQSDHSNAQRLLNSGYNTNQVDYVLGHKD 665
Query: 395 TYNTRQSYNDIEPNSQSTLKDNSYNPVNFKKSN 427
YN Y NS +T +NS + + S+
Sbjct: 666 KYNEGPHYQPPIINSSATAANNSSSSTHHYNSS 698
>U97015-4|AAB52342.1| 245|Caenorhabditis elegans Hypothetical
protein F48C1.6 protein.
Length = 245
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 126 VNRFENQSPLPPIYRVINE---HKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDY 179
+ R + + P+ R+ E +V+N KP YDY P + DN +D + S Y
Sbjct: 136 IRRQNRGAGVVPLVRIDGEAAAQRVENPKPNSYDYTYSVP--SSGDNSSYDGSFSSY 190
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 138 IYRVINEHKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDYNHA 182
I+R+IN H+ K DY K K Y+Q E D N ++Y A
Sbjct: 491 IHRIIN-HQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEA 534
>L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical
protein ZC21.3 protein.
Length = 321
Score = 28.7 bits (61), Expect = 9.9
Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 2/116 (1%)
Query: 328 NQNEYVNYDSKEFYNDDYSSELNSNYPSYI-SKFKSFADDKINDNYQVVTSTSKPNFDDI 386
NQ +Y N ++ + + N Y + + + + N Q + T N+ +
Sbjct: 12 NQQQY-NSQQQQPQQQYNTQQYNPQQQQYNPQQQQQYGTTSFSSNGQAMYQTGTTNYPTL 70
Query: 387 RNLLIDEKTYNTRQSYNDIEPNSQSTLKDNSYNPVNFKKSNLYTNIDESIAITPRN 442
Y+ P S +YNP + SN+Y N S T ++
Sbjct: 71 YQPSSSSPQYSNGAPSTTYSPTSTYGYSSQNYNPSSASSSNVYRNPSTSYGNTQQS 126
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.7 bits (61), Expect = 9.9
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 275 NVITDYRKTNYDRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVN 334
N ++D+ TN + TR ++ ++ + +A +N + + K + Y+
Sbjct: 4419 NTVSDFVMTNDNSTRFLAVGRKCTRERNNTILKAVVVAR-ENIGDICEIDGEKIPDAYIE 4477
Query: 335 YDSKEFYNDDYSSEL-NSNYPSYISKFKSFADDKINDNYQVVTSTSKPNFDDIRNLLIDE 393
+S D S +L N ++ S+ K F KI + T + NF+ +L IDE
Sbjct: 4478 GNSLSIKVDTLSKKLSNVSFKVSASEGKVFETRKIEIAQE---DTDEENFEINYSLRIDE 4534
Query: 394 KTYNTRQSYNDIE--PNSQSTLKDNS 417
++ NT ++ + E +QS DN+
Sbjct: 4535 QSGNTTYTFENSELYQGNQSRELDNT 4560
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 9.9
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 275 NVITDYRKTNYDRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVN 334
N ++D+ TN + TR ++ ++ + +A +N + + K + Y+
Sbjct: 4419 NTVSDFVMTNDNSTRFLAVGRKCTRERNNTILKAVVVAR-ENIGDICEIDGEKIPDAYIE 4477
Query: 335 YDSKEFYNDDYSSEL-NSNYPSYISKFKSFADDKINDNYQVVTSTSKPNFDDIRNLLIDE 393
+S D S +L N ++ S+ K F KI + T + NF+ +L IDE
Sbjct: 4478 GNSLSIKVDTLSKKLSNVSFKVSASEGKVFETRKIEIAQE---DTDEENFEINYSLRIDE 4534
Query: 394 KTYNTRQSYNDIE--PNSQSTLKDNS 417
++ NT ++ + E +QS DN+
Sbjct: 4535 QSGNTTYTFENSELYQGNQSRELDNT 4560
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 9.9
Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 275 NVITDYRKTNYDRGNNFNNYISTTRSYDDDVINSNKIANNDNDYGLNDYAKLKNQNEYVN 334
N ++D+ TN + TR ++ ++ + +A +N + + K + Y+
Sbjct: 4419 NTVSDFVMTNDNSTRFLAVGRKCTRERNNTILKAVVVAR-ENIGDICEIDGEKIPDAYIE 4477
Query: 335 YDSKEFYNDDYSSEL-NSNYPSYISKFKSFADDKINDNYQVVTSTSKPNFDDIRNLLIDE 393
+S D S +L N ++ S+ K F KI + T + NF+ +L IDE
Sbjct: 4478 GNSLSIKVDTLSKKLSNVSFKVSASEGKVFETRKIEIAQE---DTDEENFEINYSLRIDE 4534
Query: 394 KTYNTRQSYNDIE--PNSQSTLKDNS 417
++ NT ++ + E +QS DN+
Sbjct: 4535 QSGNTTYTFENSELYQGNQSRELDNT 4560
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 138 IYRVINEHKVQNKKPYDYDYKVKSPEYNQHDNEIHDENNSDYNHA 182
I+R+IN H+ K DY K K Y+Q E D N ++Y A
Sbjct: 491 IHRIIN-HQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEA 534
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,118,832
Number of Sequences: 27539
Number of extensions: 710115
Number of successful extensions: 1953
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1929
Number of HSP's gapped (non-prelim): 74
length of query: 492
length of database: 12,573,161
effective HSP length: 84
effective length of query: 408
effective length of database: 10,259,885
effective search space: 4186033080
effective search space used: 4186033080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -