Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000165-TA|BGIBMGA000165-PA|undefined
(102 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 30 0.062
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 0.43
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 27 0.57
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 27 0.57
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 27 0.57
SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein Rad4|Schizosac... 27 0.76
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 26 1.0
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 26 1.0
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 26 1.3
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 1.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 1.3
SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm type|Schizos... 26 1.3
SPBC1773.13 |||aromatic aminotransferase |Schizosaccharomyces po... 25 1.8
SPCC1753.02c |git3||G-protein coupled receptor Git3|Schizosaccha... 25 1.8
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 25 1.8
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 25 1.8
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 25 1.8
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 25 3.1
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 3.1
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 4.0
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 24 4.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 24 4.0
SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces pombe... 24 4.0
SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomy... 24 5.4
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 24 5.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 24 5.4
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 23 7.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 23 7.1
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 23 7.1
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 23 9.3
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 23 9.3
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 23 9.3
SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|ch... 23 9.3
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 23 9.3
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 30.3 bits (65), Expect = 0.062
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 11 VLHPGNCAQHQISQTP------STKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILT 64
++ PGN +H ++ TP TK PQ++ K+ + P S + + H++ T
Sbjct: 397 IVSPGNREKHSLNSTPESIMKKDTKWPQNLAKNNINSEPNTPTKSNIDTGKAHSARAHKT 456
Query: 65 VQNLTS 70
+N+ S
Sbjct: 457 RKNIQS 462
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.5 bits (58), Expect = 0.43
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 27 STKQPQSILKDPSRHK-YGHPYGS--------PVSSSTPHNSNQILTVQ-NLTSDTPQYG 76
S+K S KD + +G +GS PVSSS PHN + S+ P
Sbjct: 719 SSKSASSFKKDRDKESIFGSLFGSKKKQTEIPPVSSSPPHNDAPPKAKPISAPSELPNTT 778
Query: 77 TIKKENKKQNVTIDESFNKRSE 98
++ E K Q VT DE +++S+
Sbjct: 779 SV-AEAKCQTVTDDEGTDQQSD 799
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 27.1 bits (57), Expect = 0.57
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 18 AQHQISQTPSTK--QPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTP 73
A IS+ +TK + Q + S HK+ H S SSS+ H N +V T+ TP
Sbjct: 530 ANRVISEIRTTKIYKAQQHKQKSSHHKHHHHKKSK-SSSSKHKENDKASVSITTTTTP 586
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 27.1 bits (57), Expect = 0.57
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Query: 20 HQISQTPSTKQPQSILKDPSRH-------KYGHPYGSPVSSSTPHNS 59
H I QT T P K P+++ K GH SP+ SS+P S
Sbjct: 722 HSIFQTRETTSPSVQNKTPTKYHRELKSSKDGHEQASPLVSSSPSGS 768
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.1 bits (57), Expect = 0.57
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 4 VPPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPH 57
V PP+ + N Q+ +Q + + PQ + +P YG PY + P+
Sbjct: 88 VQPPNDPAIIGSNSGQYNWNQAQTAQPPQPVQPNP----YGAPYQQAPPAGAPY 137
>SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein
Rad4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 648
Score = 26.6 bits (56), Expect = 0.76
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 50 PVSSSTPHNSNQILTVQNLTSDTPQYGTIKKENKKQNVTIDESFNKRSET 99
P+ STPHNS +L+V+ ++ + T+ + N N F +RS T
Sbjct: 523 PIGHSTPHNSPSLLSVKKRQNNHIRSNTLIQLN--SNSKDSTIFPRRSVT 570
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 26.2 bits (55), Expect = 1.0
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 63 LTVQNLTSDTPQYGTIKKENKKQNVTIDESFNKRSETHVV 102
+T QNLT IK NKK+N ++ K+S VV
Sbjct: 14 ITKQNLTDGLVGGQRIKAPNKKKNRKASKNTTKKSTVSVV 53
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 26.2 bits (55), Expect = 1.0
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 14 PGNCAQHQISQTPSTKQPQSI--LKDPSRHKYGHPYGSPVSSSTPH 57
PG SQ+ ST P + DPS YG P P S + P+
Sbjct: 446 PGTRRIPTYSQSTSTTNPSATPTTGDPSNSTYGGPQTFPNSGNNPN 491
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 25.8 bits (54), Expect = 1.3
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 22 ISQTPSTKQPQSILKDPSR-HKYGHPYGSPVSSSTPHNSNQ----ILTVQNLTSDTPQYG 76
I +TP K +SI+K S H P S SS TP NSN + ++N + +
Sbjct: 248 IPRTPQ-KTVRSIVKQTSSPHSSKMPKHSLPSSPTPFNSNSGDSLLSRIKNSNQSSSERP 306
Query: 77 TIKKENKKQNVTIDESFNKRSE 98
T ++QN + + N ++
Sbjct: 307 TANNGAQEQNQSSSSAGNTSND 328
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 1.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 49 SPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKENKKQNVTIDESFNKRSETHVV 102
SPV+ + +N + TV+N +T Q +KK ++K + S+ + S + V
Sbjct: 231 SPVAEESYNNVQRSSTVRN---NTTQKSVLKKPSRKMSPAYTSSYRQNSPSSQV 281
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 1.3
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 23 SQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTP---HNSNQILTVQNLTSDTPQYGT 77
S T S+ S+ S S VSSSTP NS T + TS + QY T
Sbjct: 221 SATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNT 278
>SPBC23E6.01c ||SPBPJ758.01|RNA-binding protein, rrm
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 50 PVSSSTPHNSNQILTVQNLTSDTPQYGTIKKENKKQNVTI 89
PV S P + N + +T YG+ + EN Q T+
Sbjct: 56 PVQSQDPISPNMASNESGNSENTSNYGSSRDENVYQKTTL 95
>SPBC1773.13 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 481
Score = 25.4 bits (53), Expect = 1.8
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 52 SSSTPHNSNQILTVQNLTSDTPQYGTIKKENKKQNVTIDESFNKRSE 98
SS PH + ++ L+ PQ G K+EN ++ +FN +++
Sbjct: 42 SSGLPHPNK--FAIRELSIKFPQLGCFKEENGTYAKEVNVTFNIKAD 86
>SPCC1753.02c |git3||G-protein coupled receptor
Git3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 1.8
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Query: 7 PDVTVLHPGNCAQHQISQTPSTKQP-QSILKDPSRHKYG-----HPYGSPVSSSTPHNSN 60
PD L P ++ TPS Q S PS + HP P S STP N N
Sbjct: 243 PDQVALPPFPDTNSTLTYTPSNSQSIYSSQSQPSPYSRPLLSSVHPNLPPGSQSTPANLN 302
Query: 61 Q 61
Q
Sbjct: 303 Q 303
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 25.4 bits (53), Expect = 1.8
Identities = 22/96 (22%), Positives = 36/96 (37%)
Query: 4 VPPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQIL 63
V P L N + S S P+ IL+ SR +P SP S + +
Sbjct: 44 VTPHKRRALARRNSLARRRSNVFSATTPRDILRMLSRALAKNPVPSPAESESSERRHTPQ 103
Query: 64 TVQNLTSDTPQYGTIKKENKKQNVTIDESFNKRSET 99
T + TP+ + K+ K + S + ++T
Sbjct: 104 TNSQKSQKTPRLSSNKRRTLKNDAKQRNSQSPGTDT 139
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 25.4 bits (53), Expect = 1.8
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 22 ISQTPSTKQPQSILKDPSRHKYGHPYGSPVSS-STPHNSNQILTVQNLTSDTPQYGTIKK 80
I ++ ST++P+ + K P S+ + P +SN+ + N+ + + + +
Sbjct: 1251 IGESKSTRKPRPTKRQRQIMKQVAEGLLPASAIAPPKSSNEKKSSNNVKAVEAETKSKSE 1310
Query: 81 ENKKQNVTIDESFNKRSETHV 101
++ K+N T N ++E+HV
Sbjct: 1311 KSPKKNGTNISDANNKNESHV 1331
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.4 bits (53), Expect = 1.8
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 2 AAVPPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQ 61
A++ P+ T+L +HQ + P+ + Q P R + + S P +S
Sbjct: 470 ASLSHPERTILFKAASTRHQANNDPNNLEKQQPHSFPLRKQ------NVAQSEFPKHS-- 521
Query: 62 ILTVQNLTSDTPQYGTIKKENKKQNVTIDESFNKRSE 98
+++ + + PQ + + QN + DE FN R E
Sbjct: 522 ---LRDNSENAPQILSSFHDLSLQNESFDEMFNGRYE 555
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 24.6 bits (51), Expect = 3.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 11 VLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPH 57
+L PG+ A + S +P + +P K HP S S++ H
Sbjct: 71 MLPPGSLASVKSSSLAKKARPFTASSNPRMPKSAHPISSRSVSASSH 117
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 24.6 bits (51), Expect = 3.1
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 34 ILKDPSRHKYGHPYGSPVS-SSTPHNSNQILTVQNLTSDTPQYGTIKKENKKQNVT-IDE 91
+L + S H++G P+ PV+ P + + Q+L T+K K+ N+T +DE
Sbjct: 197 MLDNISNHRFGAPFSHPVNRKEAPDYDSLVYKPQDLR-------TLKNMIKEGNITEVDE 249
Query: 92 SFNK 95
+ +
Sbjct: 250 LYRE 253
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 24.2 bits (50), Expect = 4.0
Identities = 13/46 (28%), Positives = 18/46 (39%)
Query: 47 YGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKENKKQNVTIDES 92
YGS + S+ SN + S+ P Y NV+I S
Sbjct: 481 YGSRAALSSRSQSNLLSPTSTGASNQPNYSPFADNPSSSNVSIPRS 526
Score = 23.0 bits (47), Expect = 9.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 18 AQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTS 70
+ H +S + S+ S S H P SSS+ H+S+ +T L+S
Sbjct: 119 SSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSSSSSYHSSS--MTTSGLSS 169
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 24.2 bits (50), Expect = 4.0
Identities = 16/71 (22%), Positives = 29/71 (40%)
Query: 21 QISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKK 80
++S S+K+ S+H P SP+ + N SD G+ +
Sbjct: 58 KLSPVASSKENYPDNHMHSKHISKLPIASPIPRGLDRSGELSYKDNNHWSDRSSTGSPRW 117
Query: 81 ENKKQNVTIDE 91
EN N++++E
Sbjct: 118 ENGSMNLSVEE 128
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 24.2 bits (50), Expect = 4.0
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 25 TPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDT 72
TP++ SI + + + Y SPVSS + ++Q+ + + S T
Sbjct: 77 TPTSSSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPT 124
>SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 590
Score = 24.2 bits (50), Expect = 4.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 57 HNSNQILTVQNLTSDTPQYGTIKKENKKQNVTID 90
H ++ +L VQ L + + +KK+NK ++T+D
Sbjct: 210 HPNDMVLCVQWLANVSLLLFYLKKDNKLDDLTVD 243
>SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 241
Score = 23.8 bits (49), Expect = 5.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 49 SPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKENKK 84
S S++T QI T +LT + T KKE+KK
Sbjct: 80 SKASATTSFQQGQIETKPDLTLFINELLTTKKEHKK 115
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 23.8 bits (49), Expect = 5.4
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 23 SQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILT 64
S TP+ Q S+ Y SP+SS++ +S I++
Sbjct: 785 SATPTITQSSISTSVSSQSSMNSSYSSPISSNSVTSSTSIIS 826
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 80 KENKKQNVTIDESFNKRSETH 100
KEN++ ++D SF K +E+H
Sbjct: 598 KENEQNFSSLDTSFKKLNESH 618
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 23.4 bits (48), Expect = 7.1
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 18 AQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGT 77
A+ +I + +P ++ P H+ +PV T S+ + TV TS T Y T
Sbjct: 782 AKEEIQRLTMLLEPHAV---PPIHQIKQTGYAPVQPKTSQASSILPTVPRTTSYTSPYAT 838
Score = 23.0 bits (47), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 75 YGTIKKENKKQNVTIDESFNKRSET 99
Y T+K +N + + +DES K S T
Sbjct: 475 YKTLKPKNDEDDSKVDESVAKDSTT 499
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 23.4 bits (48), Expect = 7.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 23 SQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTP 56
S+ PS P+S + P + P S ++S+ P
Sbjct: 1244 SEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAP 1277
>SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1150
Score = 23.4 bits (48), Expect = 7.1
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 52 SSSTPHNSNQILTVQ-NLTSDTPQYGTIKKENKKQNVTIDES 92
++ST I V NLTSD P + N + T DE+
Sbjct: 1087 TASTKRKRQPIRRVTTNLTSDVPSGSEVADTNSLSSTTKDEA 1128
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 23.0 bits (47), Expect = 9.3
Identities = 12/62 (19%), Positives = 25/62 (40%)
Query: 16 NCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQY 75
+ A I+ + +QP + P ++ + + H+S + T+ N+ D P
Sbjct: 578 SAAGSSINVDTAGRQPSDEINIPGEYENSSEVAGSRNQTPTHSSIAVDTLSNVAVDQPAI 637
Query: 76 GT 77
T
Sbjct: 638 ST 639
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 23.0 bits (47), Expect = 9.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 75 YGTIKKENKKQNVTIDESFNKRSETHV 101
YG +EN K+N D + ++ THV
Sbjct: 35 YGPSVQENSKKNDLSDSADSEGESTHV 61
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 23.0 bits (47), Expect = 9.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 33 SILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTP 73
+ILK PS P P SSSTP ++ + T Q L + P
Sbjct: 396 AILKKPSSLSTTDPTLVPQSSSTPKSAQK--TPQKLPAFLP 434
>SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 23.0 bits (47), Expect = 9.3
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 63 LTVQNLTSDTPQYGTIKKENKKQNVTID 90
L V+ L TP + + K+NKK++ ++
Sbjct: 152 LEVETLAKITPIWINVAKKNKKEDFLVE 179
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 23.0 bits (47), Expect = 9.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 48 GSPVSSSTPHNSNQILTVQNLTSDTPQYGTI 78
G ++ TPHN+ + N + PQ TI
Sbjct: 13 GKMSAAPTPHNTPSGTSAPNFGAKAPQVNTI 43
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.123 0.358
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,850
Number of Sequences: 5004
Number of extensions: 24094
Number of successful extensions: 91
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 65
Number of HSP's gapped (non-prelim): 39
length of query: 102
length of database: 2,362,478
effective HSP length: 63
effective length of query: 39
effective length of database: 2,047,226
effective search space: 79841814
effective search space used: 79841814
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 47 (23.0 bits)
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