BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000165-TA|BGIBMGA000165-PA|undefined (102 letters) Database: human 224,733 sequences; 73,234,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial l... 31 0.78 AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein. 31 0.78 BX537424-1|CAD97666.1| 1539|Homo sapiens hypothetical protein pr... 29 1.8 BC032227-1|AAH32227.1| 1205|Homo sapiens ZFYVE16 protein protein. 29 1.8 BC030808-1|AAH30808.1| 809|Homo sapiens ZFYVE16 protein protein. 29 1.8 AF434817-1|AAL30772.1| 1539|Homo sapiens endofin protein. 29 1.8 AB002303-1|BAA20764.2| 1547|Homo sapiens KIAA0305 protein. 29 1.8 BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein. 28 5.5 BC069134-1|AAH69134.1| 440|Homo sapiens paired box gene 1 protein. 28 5.5 BC040501-1|AAH40501.2| 1700|Homo sapiens leucine rich repeat con... 28 5.5 AY740018-1|AAU21037.1| 438|Homo sapiens paired box gene 1 protein. 28 5.5 AL035562-3|CAB46996.1| 440|Homo sapiens paired box gene 1 protein. 28 5.5 BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open read... 27 7.3 BC002767-1|AAH02767.1| 690|Homo sapiens LATS1 protein protein. 27 7.3 AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein. 27 7.3 AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein. 27 7.3 AF164041-1|AAD50272.1| 1130|Homo sapiens WARTS protein kinase pr... 27 7.3 AF104413-1|AAD16882.1| 1130|Homo sapiens large tumor suppressor ... 27 7.3 AB209426-1|BAD92663.1| 830|Homo sapiens LATS homolog 1 variant ... 27 7.3 L00212-1|AAA60247.1| 421|Homo sapiens RAF1 protein. 27 9.6 BC043145-1|AAH43145.1| 1634|Homo sapiens leucine rich repeat con... 27 9.6 AL132655-8|CAM28316.1| 625|Homo sapiens GNAS complex locus prot... 27 9.6 AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 27 9.6 AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 27 9.6 AF117754-1|AAD22032.1| 2174|Homo sapiens thyroid hormone recepto... 27 9.6 AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin ... 27 9.6 AB058719-1|BAB47445.1| 1162|Homo sapiens KIAA1816 protein protein. 27 9.6 AB011165-1|BAA25519.2| 2005|Homo sapiens KIAA0593 protein protein. 27 9.6 AB011135-1|BAA25489.3| 1652|Homo sapiens KIAA0563 protein protein. 27 9.6 >DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial lining protein protein. Length = 1836 Score = 30.7 bits (66), Expect = 0.78 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 12 LHP-GNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHN 58 LHP G AQ + + +PS + P S+L+D S G SP + TPH+ Sbjct: 605 LHPKGAFAQPRPALSPSRQSPSSVLRDRSSVHPGAKPASP-ARRTPHS 651 >AB058769-1|BAB47495.2| 1783|Homo sapiens KIAA1866 protein protein. Length = 1783 Score = 30.7 bits (66), Expect = 0.78 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%) Query: 12 LHP-GNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHN 58 LHP G AQ + + +PS + P S+L+D S G SP + TPH+ Sbjct: 552 LHPKGAFAQPRPALSPSRQSPSSVLRDRSSVHPGAKPASP-ARRTPHS 598 >BX537424-1|CAD97666.1| 1539|Homo sapiens hypothetical protein protein. Length = 1539 Score = 29.5 bits (63), Expect = 1.8 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 49 SPVSSSTPHNSNQILTVQNLTSDTPQ---YGTIKKENKKQNVTIDESFN 94 +P SST H+S+ + QN TS Q G IK+ K + T+ +S+N Sbjct: 172 TPCVSSTDHDSDTVREQQNDTSSELQNREIGGIKELGIKVDTTLSDSYN 220 >BC032227-1|AAH32227.1| 1205|Homo sapiens ZFYVE16 protein protein. Length = 1205 Score = 29.5 bits (63), Expect = 1.8 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 49 SPVSSSTPHNSNQILTVQNLTSDTPQ---YGTIKKENKKQNVTIDESFN 94 +P SST H+S+ + QN TS Q G IK+ K + T+ +S+N Sbjct: 172 TPCVSSTDHDSDTVREQQNDTSSELQNREIGGIKELGIKVDTTLSDSYN 220 >BC030808-1|AAH30808.1| 809|Homo sapiens ZFYVE16 protein protein. Length = 809 Score = 29.5 bits (63), Expect = 1.8 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 49 SPVSSSTPHNSNQILTVQNLTSDTPQ---YGTIKKENKKQNVTIDESFN 94 +P SST H+S+ + QN TS Q G IK+ K + T+ +S+N Sbjct: 172 TPCVSSTDHDSDTVREQQNDTSSELQNREIGGIKELGIKVDTTLSDSYN 220 >AF434817-1|AAL30772.1| 1539|Homo sapiens endofin protein. Length = 1539 Score = 29.5 bits (63), Expect = 1.8 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 49 SPVSSSTPHNSNQILTVQNLTSDTPQ---YGTIKKENKKQNVTIDESFN 94 +P SST H+S+ + QN TS Q G IK+ K + T+ +S+N Sbjct: 172 TPCVSSTDHDSDTVREQQNDTSSELQNREIGGIKELGIKVDTTLSDSYN 220 >AB002303-1|BAA20764.2| 1547|Homo sapiens KIAA0305 protein. Length = 1547 Score = 29.5 bits (63), Expect = 1.8 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 49 SPVSSSTPHNSNQILTVQNLTSDTPQ---YGTIKKENKKQNVTIDESFN 94 +P SST H+S+ + QN TS Q G IK+ K + T+ +S+N Sbjct: 180 TPCVSSTDHDSDTVREQQNDTSSELQNREIGGIKELGIKVDTTLSDSYN 228 >BC112935-1|AAI12936.1| 1699|Homo sapiens QSER1 protein protein. Length = 1699 Score = 27.9 bits (59), Expect = 5.5 Identities = 18/74 (24%), Positives = 31/74 (41%) Query: 27 STKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKENKKQN 86 ST+QP + K P P + S HN + +++ Q T Q ++ ++ QN Sbjct: 284 STEQPLTSTKTPKPQSIIPPVQTLSYSKPLHNQSSVISGQAQIYSTAQLPSLLSVSQSQN 343 Query: 87 VTIDESFNKRSETH 100 + + N S H Sbjct: 344 YGLVQPHNVPSIVH 357 >BC069134-1|AAH69134.1| 440|Homo sapiens paired box gene 1 protein. Length = 440 Score = 27.9 bits (59), Expect = 5.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Query: 27 STKQPQSILKDPSRHKYGHPYGSPVS 52 ++KQP S P H Y +PY SPVS Sbjct: 142 ASKQPPSQPTLPYNHIYQYPYPSPVS 167 >BC040501-1|AAH40501.2| 1700|Homo sapiens leucine rich repeat containing 37A protein. Length = 1700 Score = 27.9 bits (59), Expect = 5.5 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 31 PQSILKDPS-RHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKE 81 P+ + KDP+ R G STP + Q L + ++DTP G++ E Sbjct: 147 PKKLKKDPAQRWSLAEIIGITRQLSTPQSQKQTLQNEYSSTDTPYPGSLPPE 198 >AY740018-1|AAU21037.1| 438|Homo sapiens paired box gene 1 protein. Length = 438 Score = 27.9 bits (59), Expect = 5.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Query: 27 STKQPQSILKDPSRHKYGHPYGSPVS 52 ++KQP S P H Y +PY SPVS Sbjct: 140 ASKQPPSQPTLPYNHIYQYPYPSPVS 165 >AL035562-3|CAB46996.1| 440|Homo sapiens paired box gene 1 protein. Length = 440 Score = 27.9 bits (59), Expect = 5.5 Identities = 13/26 (50%), Positives = 16/26 (61%) Query: 27 STKQPQSILKDPSRHKYGHPYGSPVS 52 ++KQP S P H Y +PY SPVS Sbjct: 142 ASKQPPSQPTLPYNHIYQYPYPSPVS 167 >BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open reading frame 24 protein. Length = 449 Score = 27.5 bits (58), Expect = 7.3 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 3/70 (4%) Query: 22 ISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKE 81 ++ T +T P S PS+H SPV P I ++ D P T K Sbjct: 217 VATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQAQGPI---SQVSVDQPVVNTTNKS 273 Query: 82 NKKQNVTIDE 91 + T E Sbjct: 274 TPMPSNTTPE 283 >BC002767-1|AAH02767.1| 690|Homo sapiens LATS1 protein protein. Length = 690 Score = 27.5 bits (58), Expect = 7.3 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 5 PPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSP 50 PP + + ++P N Q IS P +QP I++ S K+ P G P Sbjct: 303 PPLNTSPMNPPNQGQRGISSVPVGRQP-IIMQSSS--KFNFPSGRP 345 >AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein. Length = 449 Score = 27.5 bits (58), Expect = 7.3 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 3/70 (4%) Query: 22 ISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKE 81 ++ T +T P S PS+H SPV P I ++ D P T K Sbjct: 217 VATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQAQGPI---SQVSVDQPVVNTTNKS 273 Query: 82 NKKQNVTIDE 91 + T E Sbjct: 274 TPMPSNTTPE 283 >AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein. Length = 449 Score = 27.5 bits (58), Expect = 7.3 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 3/70 (4%) Query: 22 ISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKE 81 ++ T +T P S PS+H SPV P I ++ D P T K Sbjct: 217 VATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQAQGPI---SQVSVDQPVVNTTNKS 273 Query: 82 NKKQNVTIDE 91 + T E Sbjct: 274 TPMPSNTTPE 283 >AF164041-1|AAD50272.1| 1130|Homo sapiens WARTS protein kinase protein. Length = 1130 Score = 27.5 bits (58), Expect = 7.3 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 5 PPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSP 50 PP + + ++P N Q IS P +QP I++ S K+ P G P Sbjct: 303 PPLNTSPMNPPNQGQRGISSVPVGRQP-IIMQSSS--KFNFPSGRP 345 >AF104413-1|AAD16882.1| 1130|Homo sapiens large tumor suppressor 1 protein. Length = 1130 Score = 27.5 bits (58), Expect = 7.3 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 5 PPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSP 50 PP + + ++P N Q IS P +QP I++ S K+ P G P Sbjct: 303 PPLNTSPMNPPNQGQRGISSVPVGRQP-IIMQSSS--KFNFPSGRP 345 >AB209426-1|BAD92663.1| 830|Homo sapiens LATS homolog 1 variant protein. Length = 830 Score = 27.5 bits (58), Expect = 7.3 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 5 PPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSP 50 PP + + ++P N Q IS P +QP I++ S K+ P G P Sbjct: 155 PPLNTSPMNPPNQGQRGISSVPVGRQP-IIMQSSS--KFNFPSGRP 197 >L00212-1|AAA60247.1| 421|Homo sapiens RAF1 protein. Length = 421 Score = 27.1 bits (57), Expect = 9.6 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 39 SRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKENKKQNVTIDESFNKRSE 98 S+H+Y P+ +++S+P + + Q TS TP + + I+++ SE Sbjct: 1 SQHRYSTPHAFTLNTSSPSSEGSLSQRQRSTS-TPNVHMVSTTLPVDSRMIEDAIRSHSE 59 Query: 99 T 99 + Sbjct: 60 S 60 >BC043145-1|AAH43145.1| 1634|Homo sapiens leucine rich repeat containing 37, member A3 protein. Length = 1634 Score = 27.1 bits (57), Expect = 9.6 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 31 PQSILKDPS-RHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKE 81 P+ + KDP+ R G STP + Q L + ++DTP G++ E Sbjct: 147 PKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPE 198 >AL132655-8|CAM28316.1| 625|Homo sapiens GNAS complex locus protein. Length = 625 Score = 27.1 bits (57), Expect = 9.6 Identities = 13/41 (31%), Positives = 17/41 (41%) Query: 6 PPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHP 46 PP + +L PG Q+ QT PQ +L G P Sbjct: 411 PPPLRLLRPGQPMSPQLRQTQGLPLPQPLLPPGQPKSAGRP 451 >AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 protein. Length = 4262 Score = 27.1 bits (57), Expect = 9.6 Identities = 16/70 (22%), Positives = 26/70 (37%) Query: 23 SQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKEN 82 S TP T ++ P+ P +P STP S + T +S+T T + Sbjct: 3249 SNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADT 3308 Query: 83 KKQNVTIDES 92 T ++ Sbjct: 3309 STPVTTYSQA 3318 >AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 protein. Length = 4493 Score = 27.1 bits (57), Expect = 9.6 Identities = 16/70 (22%), Positives = 26/70 (37%) Query: 23 SQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKEN 82 S TP T ++ P+ P +P STP S + T +S+T T + Sbjct: 3249 SNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADT 3308 Query: 83 KKQNVTIDES 92 T ++ Sbjct: 3309 STPVTTYSQA 3318 >AF117754-1|AAD22032.1| 2174|Homo sapiens thyroid hormone receptor-associated protein complex component TRAP240 protein. Length = 2174 Score = 27.1 bits (57), Expect = 9.6 Identities = 13/39 (33%), Positives = 19/39 (48%) Query: 1 MAAVPPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPS 39 MA P P HP + +++TPST Q Q + P+ Sbjct: 527 MANSPQPPPLSPHPCDVVDEGVTKTPSTPQSQHFYQMPT 565 >AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin MUC3 protein. Length = 648 Score = 27.1 bits (57), Expect = 9.6 Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 52 SSSTPHNSNQILTVQNLTSDTPQY 75 ++STPH S I T + +S TP + Sbjct: 566 ATSTPHTSTSITTTETPSSSTPSF 589 >AB058719-1|BAB47445.1| 1162|Homo sapiens KIAA1816 protein protein. Length = 1162 Score = 27.1 bits (57), Expect = 9.6 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 23 SQTPSTKQPQSILKDPSRHKYGH-----PYGSPVSSSTPHNSNQILTVQNLTSDTP 73 ++TP +++ S+ DPS + H P P SS P ++ T + TP Sbjct: 375 TETPLSQESASVKSDPSHSPFAHVSMGSPQARPSSSGPPFSTVSTATSLPSVASTP 430 >AB011165-1|BAA25519.2| 2005|Homo sapiens KIAA0593 protein protein. Length = 2005 Score = 27.1 bits (57), Expect = 9.6 Identities = 13/39 (33%), Positives = 19/39 (48%) Query: 1 MAAVPPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPS 39 MA P P HP + +++TPST Q Q + P+ Sbjct: 358 MANSPQPPPLSPHPCDVVDEGVTKTPSTPQSQHFYQMPT 396 >AB011135-1|BAA25489.3| 1652|Homo sapiens KIAA0563 protein protein. Length = 1652 Score = 27.1 bits (57), Expect = 9.6 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 31 PQSILKDPS-RHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKE 81 P+ + KDP+ R G STP + Q L + ++DTP G++ E Sbjct: 165 PKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPE 216 Database: human Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 73,234,838 Number of sequences in database: 224,733 Lambda K H 0.307 0.123 0.358 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,746,180 Number of Sequences: 224733 Number of extensions: 801537 Number of successful extensions: 1951 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 1932 Number of HSP's gapped (non-prelim): 38 length of query: 102 length of database: 73,234,838 effective HSP length: 78 effective length of query: 24 effective length of database: 55,705,664 effective search space: 1336935936 effective search space used: 1336935936 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.6 bits) S2: 57 (27.1 bits)
- SilkBase 1999-2023 -