Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000164-TA|BGIBMGA000164-PA|IPR003961|Fibronectin, type
III, IPR007110|Immunoglobulin-like, IPR008957|Fibronectin, type
III-like fold, IPR003599|Immunoglobulin subtype,
IPR003598|Immunoglobulin subtype 2, IPR013162|CD80-like,
immunoglobulin C2-set, IPR013098|Immunoglobulin I-set,
IPR013151|Immunoglobulin
(838 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0606 + 4543031-4543177,4543287-4543709,4543836-4543952,454... 38 0.044
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 34 0.54
11_01_0749 - 6305087-6307522 33 1.2
10_08_0460 - 18098187-18098248,18098331-18098399,18098468-180994... 32 2.2
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 32 2.2
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 31 2.9
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 31 2.9
03_06_0720 + 35739383-35739391,35739802-35740275,35740695-357411... 31 2.9
02_02_0535 - 11292509-11294679,11294971-11295040,11295268-112953... 31 3.8
10_01_0002 - 34139-34234,34337-34345,34806-35048,35931-36003,361... 31 5.0
07_03_0831 - 21810002-21810319,21810423-21810573,21810660-218108... 31 5.0
02_03_0144 + 15694766-15694883,15694980-15697612 31 5.0
09_02_0603 - 11150739-11150746,11150791-11151340 30 6.7
07_03_0419 - 17993478-17993777,17994045-17994195,17994799-179950... 30 6.7
05_03_0085 - 8271718-8272005,8272110-8272393,8273610-8274012,827... 30 6.7
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 30 6.7
07_03_0736 - 21079880-21080185,21080231-21080429,21080531-210807... 30 8.8
04_03_0904 + 20717005-20718087 30 8.8
02_04_0289 + 21615745-21616155,21617417-21617870,21618162-216182... 30 8.8
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54... 30 8.8
>02_01_0606 +
4543031-4543177,4543287-4543709,4543836-4543952,
4544064-4544423
Length = 348
Score = 37.5 bits (83), Expect = 0.044
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 700 AVYDGDHSRTLPHPHRHKDMSGHSTLGRSAGKPNYVPAPSPMPPL 744
A Y+G+H+ P P G+SAGKP + PA +P P+
Sbjct: 242 ATYEGEHNHGQPPPPLQSAAQNSDGSGKSAGKPPHAPAAAPPAPV 286
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 33.9 bits (74), Expect = 0.54
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 732 PNYVPAPSPMPPLDGSYYNMSSDRYLSYPPLIGEYLQQQAGRTPTPPQQYGAQPLTKP 789
P+YVP+P P SY S Y PP+ Y G TP+PP +Y +P P
Sbjct: 690 PSYVPSPPQYAPQPPSYV-PSPPEYAPEPPVYAPY---PPGITPSPP-EYAPEPPPGP 742
>11_01_0749 - 6305087-6307522
Length = 811
Score = 32.7 bits (71), Expect = 1.2
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 577 IVYVSLT-GAVLVLINVALIACFVWKRRLRRIKEQAGQASKSATIEMYAPSSYNDTMTGE 635
I++V++ GA LVL+ A +W RR RR + + GQA ++A + + P + G
Sbjct: 395 IIWVAVAAGAFLVLLVALQFALLMWCRRRRR-RGRGGQADQAAAMSLMLPRHGSSKGPGS 453
Query: 636 TLSSVS-EKSETYSQDDGDER 655
+ + E + + DER
Sbjct: 454 VVEHFALEALQAATDGFSDER 474
>10_08_0460 -
18098187-18098248,18098331-18098399,18098468-18099434,
18100089-18100808,18100942-18101031,18101076-18101138,
18101223-18101366,18101471-18101527,18101606-18101680,
18101757-18101836,18101937-18102050,18102166-18102258,
18102470-18102553,18102812-18102859,18105207-18105337,
18105903-18106135
Length = 1009
Score = 31.9 bits (69), Expect = 2.2
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 538 QSKYRPDDTKATTLTSSEVGELSTV-STEYVETPDISKPVIVYV-SLTGAVLVLINVALI 595
+S+ DTK T TSS + +++ + +T+ ++P + + + S T V L +L+
Sbjct: 212 ESERNKIDTKHTEETSSSITQITGIGTTQSPQSPALLHDELTMLKSHTTPVAQLSYTSLM 271
Query: 596 ACFVWKRRLRRIKEQAGQASKSATIEMYAPSSYNDTMTGETLSSVSEKSETYSQDDGD 653
+ R+ G+ +S T + PS+YN++M T S V E+ + D
Sbjct: 272 HQVINSPRINIEPNMGGRGLESFTSMLQTPSAYNNSMI-LTTSRVCEQDMLLEDRNND 328
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/30 (60%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 731 KPNYVPAPSPMPPLDGSYYNMSSDRYLSYP 760
+PNY P PSP P+ SYY MS DR SYP
Sbjct: 156 RPNY-PPPSPQEPVRNSYY-MSYDR-PSYP 182
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 31.5 bits (68), Expect = 2.9
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 630 DTMTGET--LSSVSEKSETYSQDDGDERHPPPIPEVP 664
D + G T S +EKS T DGD PPP PE+P
Sbjct: 442 DDLKGATGPKKSETEKSATVPLKDGDGPLPPPKPEIP 478
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 31.5 bits (68), Expect = 2.9
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 572 ISKPVIVYVSLTGAVLVLINVALIACFVWKRRLRRIKEQAGQASKSATIEMYAPSSYNDT 631
I+ + ++L+ VLVL++ + C +WK + G+ S S+ S +
Sbjct: 216 INSKSVAIIALSAVVLVLMSFGI--CIIWKYKGFEKSRGTGRVSNSSATRKTGMRSSFSS 273
Query: 632 MTGETLSSVS 641
MT T S VS
Sbjct: 274 MTSSTASFVS 283
>03_06_0720 +
35739383-35739391,35739802-35740275,35740695-35741122,
35741273-35741351
Length = 329
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 708 RTLPHPHRHKD---MSGHSTLGRSAGKPNYVPAPSPMPPLDGSYYNMSSDRYLSYPPLIG 764
+ LP P R D S +S +G + G P P+P+P+ P ++S PP
Sbjct: 149 QVLPTPPRSDDGERESFYSQVGSTRGSPAATPSPAPLTP-----DRVTSWSAFVRPPSAS 203
Query: 765 EYLQQQAGRTPTPPQQYGAQP 785
QQ + R +PP + P
Sbjct: 204 RQQQQHSFRPLSPPPPSSSNP 224
>02_02_0535 -
11292509-11294679,11294971-11295040,11295268-11295324,
11298629-11298789,11299123-11299156
Length = 830
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 707 SRTLPHPHRHKDMSGHSTLGRSAGKPNYVPAPS-PMPPLDGSYYNMSSDRYLSYPPLIGE 765
+R++ P + +S ++ R + P++ P P+ G+ + ++ S PP +
Sbjct: 86 TRSINEPTQSGIISHGGSISRQSSTPDWAQDSYWPTQPIFGAEQGLDNESRWSQPPHLAR 145
Query: 766 YLQQQAGRTPTPPQQYGAQPLTKPHLM 792
+ + RT + PQQ AQ H++
Sbjct: 146 FADSRLHRTSSSPQQ-DAQYNPNEHIL 171
>10_01_0002 -
34139-34234,34337-34345,34806-35048,35931-36003,
36184-36265,36398-36580,36663-36702,36814-36886,
37022-37290
Length = 355
Score = 30.7 bits (66), Expect = 5.0
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 739 SPMPPLDGSYYNMSSDRYLSYPPLIGEYLQQQAGRTPTPPQQYGAQPLT 787
+P+ P + N+ S R PP E +QQ G TP P Q +PL+
Sbjct: 305 APLLPTEDQLANIPSKRLTQQPPPEPEVVQQ--GETPPKPIQQSQRPLS 351
>07_03_0831 -
21810002-21810319,21810423-21810573,21810660-21810897,
21811011-21811221,21811336-21811559,21811696-21811806,
21813265-21813636,21813810-21814782
Length = 865
Score = 30.7 bits (66), Expect = 5.0
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 566 YVETPD--ISKPVIVYVSLTGAVLVLINVALIAC--FVWKRRLRRIKEQAGQASKSATIE 621
YV+ P + K + ++ V+V++ V L+A +WK R RRIKE+ G K A +
Sbjct: 440 YVKVPSSLLDKSSGRWKTVVVVVVVVVVVVLLASGLLMWKCR-RRIKEKLGIGRKKAQLP 498
Query: 622 MYAPSSYNDTMTGETLSSVSEKSE 645
+ P+ S EKSE
Sbjct: 499 LLRPARDAKQDFSGPAQSEHEKSE 522
>02_03_0144 + 15694766-15694883,15694980-15697612
Length = 916
Score = 30.7 bits (66), Expect = 5.0
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 472 STVTLEWVPGFDGGLQSWYRIRYRKVFDDSYK-YEDVLP 509
S TL + G+D Q + +R+ KV+DD Y+ +E ++P
Sbjct: 867 SDSTLHRLMGYDSASQLLHDLRHSKVYDDGYESFESMVP 905
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 30.3 bits (65), Expect = 6.7
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 736 PAPSPMPPLDGSYYNMSSDRYLSYPPLIGEY-LQQQAGRTPTPPQQYGAQPLTKPHLM 792
P P PP GS + + PP +G + + R P PP Q G PL + +M
Sbjct: 40 PFGFPPPPPPGSTFVPLPQSGVPPPPPLGSFFVPPPQSRVPPPPPQLGVPPLPQFGMM 97
>07_03_0419 -
17993478-17993777,17994045-17994195,17994799-17995036,
17995133-17995343,17995440-17995618,17995735-17995833,
17996646-17997531
Length = 687
Score = 30.3 bits (65), Expect = 6.7
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 523 NTDYIFSVMAINKIG-QSKYRPDDTKATTLTSS-EVGELSTVSTEYVETPDISKPVIVYV 580
NT + SV + IG + YR D K ++G LS +++ +P PV
Sbjct: 235 NTTFNGSVSGVRNIGARCGYRYDTYKFYGGEPKLKIGSLSEINSTAPSSPPPPPPVTETR 294
Query: 581 S-----LTGAVLV-LINVA--LIACFVWKRRLRRIKEQAGQASKSATIEM 622
S LT A+LV LI + +I CF W RRLR K + A E+
Sbjct: 295 SGRKKVLTVALLVPLIALCPVVIFCFAWIRRLRNHKSMLRKKDTMAREEV 344
>05_03_0085 -
8271718-8272005,8272110-8272393,8273610-8274012,
8274792-8274816,8275686-8276149
Length = 487
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 655 RHPPPIPEVPSIHNRHMLSQTTD 677
R P P P+ PS H RHM S T D
Sbjct: 36 RGPSPNPKPPSKHRRHMASATLD 58
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 30.3 bits (65), Expect = 6.7
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 766 YLQQQAGRTPTPPQQYGAQPL--TKPHLMNGTVTG 798
Y QQ + P PPQ + QP T PHL+ G V G
Sbjct: 13 YSTQQQQQQPPPPQLHHHQPQLGTVPHLLAGGVAG 47
>07_03_0736 -
21079880-21080185,21080231-21080429,21080531-21080768,
21080888-21081098,21081181-21081320,21081400-21081537,
21086208-21087036
Length = 686
Score = 29.9 bits (64), Expect = 8.8
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 568 ETPDISKPVIVYVSL--TGAVLVLINVALIACFVWKRRLRRIKEQAGQASKSATIE 621
E D + P +V L T A LVLIN+ + CF W RR+ R++ A Q S + E
Sbjct: 276 EGKDYNVPRLVLAILLPTIAALVLINILVWLCF-W-RRMERLRSGATQPYSSNSAE 329
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 732 PNYVPAPSPMPPLDGSYYNMSSDRYLSYPPLIGEYLQQQAGRTPTPPQQYGAQPLTKP 789
P Y P P+P P +Y Y P + + PTPP Y QP P
Sbjct: 110 PTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPK-PTPPPTYKPQPKPTP 166
>02_04_0289 +
21615745-21616155,21617417-21617870,21618162-21618217,
21618307-21618437,21618565-21618727
Length = 404
Score = 29.9 bits (64), Expect = 8.8
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 711 PHPHRHKDMSGHSTLGRSAGKPNYVPAPSPMPPLDGSYYNMSSDRYLSYPPLIGEYLQQQ 770
PHPH H M H+ A +P +V P P P + M + PP ++
Sbjct: 27 PHPHAH-GMHPHAHHHIQA-QPRWVVIPYPPP------HGMVAAAPPPPPPQFVKHFAPP 78
Query: 771 AGRTPTPPQQ 780
A TP PPQQ
Sbjct: 79 ASVTPPPPQQ 88
>02_01_0077 -
546033-546223,546314-546566,546635-546865,547165-547331,
547369-548008
Length = 493
Score = 29.9 bits (64), Expect = 8.8
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 730 GKPNYVPAP----SPMPPLDGSYYNMSSDRYLSYPPLIGEYLQQQAGRTPTPPQQYGAQP 785
G P P+P SP PPL S + D PP + QQQ ++P PP++ A P
Sbjct: 45 GLPVSPPSPGYSDSPEPPLPDSPPSQEPDTPEPAPPTPPQQ-QQQPWQSPLPPRREPAPP 103
Query: 786 LT 787
T
Sbjct: 104 RT 105
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.130 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,832,835
Number of Sequences: 37544
Number of extensions: 1139056
Number of successful extensions: 2396
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2384
Number of HSP's gapped (non-prelim): 29
length of query: 838
length of database: 14,793,348
effective HSP length: 88
effective length of query: 750
effective length of database: 11,489,476
effective search space: 8617107000
effective search space used: 8617107000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
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