GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000163-TA|BGIBMGA000163-PA|IPR007110|Immunoglobulin-like
         (143 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   2.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           22   9.0  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            22   9.0  
AF185642-1|AAF15577.1|  103|Anopheles gambiae Toll-related prote...    22   9.0  
AF185641-1|AAF15576.1|  116|Anopheles gambiae Toll protein.            22   9.0  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 47  VTISGPSEARVGDPVPLTCSTAPSNPAAEIK 77
           VT SG + AR+ D + + C  +PS   +E +
Sbjct: 70  VTQSGIAAARINDVLFICCYVSPSAGVSEFE 100


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 42   FAPAHVTISGPSEARVGDPVPLTCS 66
            F PA  + SG +  R+ D +  +CS
Sbjct: 989  FMPAAGSSSGTATTRIPDSITRSCS 1013


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 99  GWITSSNITVIVEPNRRSIVVV 120
           G + SS I+  VE +RR+I+V+
Sbjct: 938 GEMISSQISSSVEQSRRTIIVL 959


>AF185642-1|AAF15577.1|  103|Anopheles gambiae Toll-related protein
           protein.
          Length = 103

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 99  GWITSSNITVIVEPNRRSIVVV 120
           G + SS I+  VE +RR+I+V+
Sbjct: 31  GEMISSQISSSVEQSRRTIIVL 52


>AF185641-1|AAF15576.1|  116|Anopheles gambiae Toll protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 99  GWITSSNITVIVEPNRRSIVVV 120
           G + SS I+  VE +RR+I+V+
Sbjct: 39  GEMISSQISSSVEQSRRTIIVL 60


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.127    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,815
Number of Sequences: 2123
Number of extensions: 5418
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 5
length of query: 143
length of database: 516,269
effective HSP length: 58
effective length of query: 85
effective length of database: 393,135
effective search space: 33416475
effective search space used: 33416475
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 44 (21.8 bits)