Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000163-TA|BGIBMGA000163-PA|IPR007110|Immunoglobulin-like
(143 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 36 2e-04
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 31 0.004
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.24
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 3.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 3.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 3.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 3.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 3.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 3.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 3.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 3.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 6.7
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 6.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 6.7
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 6.7
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 35.9 bits (79), Expect = 2e-04
Identities = 23/83 (27%), Positives = 32/83 (38%)
Query: 1 MSENVLSFTADASDNKARYSCEAKNIMISNTLKAEIDLTVLFAPAHVTISGPSEARVGDP 60
+ E VL + ++K Y C +N S AE+ L F P + + E P
Sbjct: 350 LEEAVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGP 409
Query: 61 VPLTCSTAPSNPAAEIKWLVIGK 83
A NP EI W + GK
Sbjct: 410 SMFLKCVASGNPTPEITWELDGK 432
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.5 bits (68), Expect = 0.004
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 19 YSCEAKNIMISNTLKAEIDLTVLFAPAHVTISGPSEARVGDPVPLTCSTAPSNPAAEIKW 78
Y+C A+N ++ + D+ V+ P + + +G+ LTCS + I W
Sbjct: 587 YTCSARNKQ-GHSARRSGDVAVIVPPKISPFTADRDLHLGERTTLTCSVTRGDLPLSISW 645
Query: 79 LVIGK 83
L G+
Sbjct: 646 LKDGR 650
Score = 25.4 bits (53), Expect = 0.24
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 14 DNKARYSCEAKNIMISNTLKAEIDLTVLFAPAHVTISGPSEA-RVGDPVPLTCSTAPSNP 72
+++ Y C + +T +A +L + AP + S + + G V L CS A NP
Sbjct: 392 EDRGMYQCIVRRSE-GDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAA-GNP 449
Query: 73 AAEIKWLVIG 82
++ W + G
Sbjct: 450 TPQVTWALDG 459
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 25.4 bits (53), Expect = 0.24
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 14 DNKARYSCEAKNIMISNTLKAEIDLTVLFAPAHVTISGPSEA-RVGDPVPLTCSTAPSNP 72
+++ Y C + +T +A +L + AP + S + + G V L CS A NP
Sbjct: 392 EDRGMYQCIVRRSE-GDTAQASAELQLGNAPPMLLYSFIEQTLQPGPAVSLKCSAA-GNP 449
Query: 73 AAEIKWLVIG 82
++ W + G
Sbjct: 450 TPQVTWALDG 459
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 60 PVPLTCSTAPSNP 72
PVP+ C PS P
Sbjct: 124 PVPIYCGNFPSRP 136
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 60 PVPLTCSTAPSNP 72
PVP+ C PS P
Sbjct: 124 PVPIYCGNFPSRP 136
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 60 PVPLTCSTAPSNP 72
PVP+ C PS P
Sbjct: 124 PVPIYCGNFPSRP 136
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 60 PVPLTCSTAPSNP 72
PVP+ C PS P
Sbjct: 124 PVPIYCGNFPSRP 136
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 60 PVPLTCSTAPSNP 72
PVP+ C PS P
Sbjct: 124 PVPIYCGNFPSRP 136
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 60 PVPLTCSTAPSNP 72
PVP+ C PS P
Sbjct: 124 PVPIYCGNFPSRP 136
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 60 PVPLTCSTAPSNP 72
PVP+ C PS P
Sbjct: 124 PVPIYCGNFPSRP 136
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 60 PVPLTCSTAPSNP 72
PVP+ C PS P
Sbjct: 127 PVPIYCGNFPSRP 139
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 20.6 bits (41), Expect = 6.7
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 1 MSENVLSFTADASDNKARYS 20
+++NV +F+ + DN + Y+
Sbjct: 485 LNDNVFAFSRETEDNGSLYA 504
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 20.6 bits (41), Expect = 6.7
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 60 PVPLTCSTAPSNPAAEI 76
P+P +C +P N I
Sbjct: 158 PIPASCCNSPENNTCSI 174
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 20.6 bits (41), Expect = 6.7
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 1 MSENVLSFTADASDNKARYS 20
+++NV +F+ + DN + Y+
Sbjct: 485 LNDNVFAFSRETEDNGSLYA 504
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 20.6 bits (41), Expect = 6.7
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 45 AHVTISGPSEARVGDPVPLTCSTAPSNPAA 74
AH++++ + + + + L T P NP A
Sbjct: 161 AHISVAQKLQKEIPNSIILDQYTNPGNPLA 190
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.314 0.127 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,775
Number of Sequences: 429
Number of extensions: 1698
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of query: 143
length of database: 140,377
effective HSP length: 52
effective length of query: 91
effective length of database: 118,069
effective search space: 10744279
effective search space used: 10744279
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)
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