Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000162-TA|BGIBMGA000162-PA|IPR013162|CD80-like,
immunoglobulin C2-set, IPR007110|Immunoglobulin-like
(78 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 30 0.032
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 28 0.17
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 25 1.2
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 25 1.6
SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma c... 24 2.8
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 24 2.8
SPBC17D11.06 |spp2|pri2|DNA primase large subunit Spp2 |Schizosa... 24 2.8
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 23 3.7
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 23 4.9
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 23 4.9
SPBC30D10.14 |||dienelactone hydrolase family|Schizosaccharomyce... 23 4.9
SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces po... 23 4.9
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 23 6.4
SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit |Schizosacc... 23 6.4
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 23 6.4
SPAC17H9.07 |||signal recognition particle subunit Srp21 |Schizo... 23 6.4
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 22 8.5
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 22 8.5
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 22 8.5
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 30.3 bits (65), Expect = 0.032
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 27 VEITNHPPNSKLEVKEGEDVSLECFVKNAKPPAKI 61
V IT P S +EVKE V+L C V+N P +
Sbjct: 160 VLITPKPNTSAIEVKENRKVNLRCVVENRLLPDSV 194
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 27.9 bits (59), Expect = 0.17
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 18 FEKIAPPKSVEITNHPPNSKLEVKEGEDVSLECFVKNAKPPAKIV 62
+ +I PP++ T+ PNS E F ++A P KI+
Sbjct: 183 YHEIEPPRTASNTSPTPNSIKSAHPAEPPKRPAFTRSATSPDKIL 227
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 25.0 bits (52), Expect = 1.2
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 16 IKFEKIAPPKSVEITNHPPNSKLEVKEGEDVSLECFVKNAK 56
I+ + PP + TN+P +S++ K S F KN K
Sbjct: 499 IQTQSTKPPTASSTTNNPSSSQINQKRSYSTS-SLFSKNKK 538
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 24.6 bits (51), Expect = 1.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 5 CEYISTPISKSIKFEKIAPPKSVEITNHPPNSKLEVKEGEDVSLECFVKNAKPPAKIVWY 64
CEY+STP + EK P S+ +++ + ++E + L+ + K A A+ +
Sbjct: 2979 CEYLSTPNLELFVKEKKKPIMSITMSDSSAYGEELMRERFEHLLKAYEKMALMVAEQEEF 3038
Query: 65 RGNVE 69
+E
Sbjct: 3039 NAKIE 3043
>SPCC24B10.22 ||SPCPB16A4.01|mitochondrial DNA polymerase gamma
catalytic subunit|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1018
Score = 23.8 bits (49), Expect = 2.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 6 EYISTPISKSIKFEKIAPPKSVEITNHPPNSKLEVKEG 43
E+ +SK+IKF KI P + P K+G
Sbjct: 118 EFAEPHLSKAIKFSKIDTPVQPKTWKRQPGWTKYAKDG 155
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 23.8 bits (49), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 23 PPKSVEITNHPPNSKLEVKEGEDVSLECFVKN 54
P K V+ NH P KL +EG + C ++
Sbjct: 286 PAKRVKRQNHIPKCKLCAQEGSSLVTCCICQS 317
>SPBC17D11.06 |spp2|pri2|DNA primase large subunit Spp2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 459
Score = 23.8 bits (49), Expect = 2.8
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 15 SIKFEKIAPPKSVEITNHPPNSKLEVKEGEDVSLECFVKNAKPPAKIVWYRGNVELKG 72
S FE ++ P + PP S++ ++E E +++ V + + ++ + EL G
Sbjct: 18 SASFESLSYPTRLNFYKKPPVSEISIEEFETWAIDRLVVLGEIESAMLRNKTKNELNG 75
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 23.4 bits (48), Expect = 3.7
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 6 EYISTPISKS-IKFEKIAPPKSVEITNHP 33
E++ SKS + E+IA P S+E N+P
Sbjct: 675 EFLLISDSKSDLNSEEIATPNSLEFKNNP 703
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 23.0 bits (47), Expect = 4.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 9 STPISKSIKFEKIAPPKSVEITNH 32
STPIS S P KS + +NH
Sbjct: 217 STPISSSYSSSGTLPSKSNKSSNH 240
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 23.0 bits (47), Expect = 4.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 11 PISKSIKFEKIAPPKSVEITNH 32
P+SK++ KI P V++ N+
Sbjct: 432 PLSKTLTSHKIVPKHQVDLENY 453
>SPBC30D10.14 |||dienelactone hydrolase family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 249
Score = 23.0 bits (47), Expect = 4.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 6 EYISTPISKSIKFEKIAPPKSVEITNHPPN 35
++ ST IS ++ + K+A NH PN
Sbjct: 101 DFFSTRISPNLHWPKLAKVVEAVRANHGPN 130
>SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 451
Score = 23.0 bits (47), Expect = 4.9
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 9 STPISKSIKFEKIAPPKSVEITNHPPNSKLEVKEGEDVSLE 49
S+P+ + E + + E+T K ++ G D++ E
Sbjct: 214 SSPVHNEVMAEPLPHSNNREVTQATNQPKWQIHSGSDIASE 254
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 22.6 bits (46), Expect = 6.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 7 YISTPISKSIKFEKIAPPKSVEITNHPPNSKLEV 40
YI I +S+ + + +EI + P SKLE+
Sbjct: 213 YIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEI 246
>SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 940
Score = 22.6 bits (46), Expect = 6.4
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 36 SKLEVKEGEDVSLECFVKNAKPPAKIVWYRGNVELKGDKGRL 77
+K+++ ED+SL F+ + + L+GD G L
Sbjct: 850 NKVDISSNEDISLYDFLHKIMKKTNMNCLTPDASLRGDCGFL 891
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 22.6 bits (46), Expect = 6.4
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 31 NHPPNSKLEVKEGEDVSLECFVKNAKPPAKIVWYRGN-VELKG 72
+H N K E E +S + K +WY GN +E+ G
Sbjct: 597 SHAFNLKSAYGESEALSFTNYTPGFKGAIDHIWYTGNSLEVTG 639
>SPAC17H9.07 |||signal recognition particle subunit Srp21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 120
Score = 22.6 bits (46), Expect = 6.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 6 EYISTPISKSIKFEKIAPPK 25
E +++P+++ K E APPK
Sbjct: 90 EVVASPVTEQKKAEPSAPPK 109
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 22.2 bits (45), Expect = 8.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 40 VKEGEDVSLECFVKNAKPPAKIV 62
VK+ ++ CF+ PAKIV
Sbjct: 1846 VKQAAYATIACFISAYDTPAKIV 1868
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 22.2 bits (45), Expect = 8.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 15 SIKFEKIAPPKSVEITNHPPNSK 37
+I + PP E+ NH P S+
Sbjct: 365 NISYSPPPPPPPPELLNHSPKSR 387
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 22.2 bits (45), Expect = 8.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 12 ISKSIKFEKIAPPKSVEITNHPPNSKLEVKEGEDVSLECFVK 53
I++ I E +AP K V+ KL +EG+ + C K
Sbjct: 105 INEQIITEAVAPEKDVDGFCETNLGKLTKREGQPLFTACTPK 146
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.134 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,752
Number of Sequences: 5004
Number of extensions: 13279
Number of successful extensions: 36
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 19
length of query: 78
length of database: 2,362,478
effective HSP length: 58
effective length of query: 20
effective length of database: 2,072,246
effective search space: 41444920
effective search space used: 41444920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)
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