GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000161-TA|BGIBMGA000161-PA|undefined
         (108 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q23KG8 Cluster: Putative uncharacterized protein; n=2; ...    32   1.9  
UniRef50_Q5TVN1 Cluster: ENSANGP00000012667; n=3; Culicidae|Rep:...    32   2.5  
UniRef50_A5ZBR9 Cluster: Putative uncharacterized protein; n=1; ...    31   3.3  
UniRef50_Q54UU6 Cluster: Putative uncharacterized protein; n=1; ...    31   3.3  
UniRef50_Q6UB92 Cluster: Putative uncharacterized protein; n=1; ...    31   4.4  
UniRef50_Q15Z39 Cluster: Carboxyl transferase; n=3; Proteobacter...    31   4.4  
UniRef50_P47506 Cluster: Dephospho-CoA kinase; n=2; Mycoplasma g...    31   5.8  
UniRef50_Q1NI09 Cluster: Sensor protein; n=1; Sphingomonas sp. S...    30   7.7  
UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n...    30   7.7  

>UniRef50_Q23KG8 Cluster: Putative uncharacterized protein; n=2;
            Alveolata|Rep: Putative uncharacterized protein -
            Tetrahymena thermophila SB210
          Length = 1540

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 14/50 (28%), Positives = 30/50 (60%)

Query: 51   KIKRIYTSSEQQHSDLRSIEQYHPLGGRSSLCRKPQRGDQNEMRESFPMT 100
            +++ IY++  Q   ++RS +++     + S   K Q+ +QNE +ES+ M+
Sbjct: 1133 QVRPIYSNGSQTQQNIRSPKRWDIPQNKQSEQNKYQKNEQNEFQESYQMS 1182


>UniRef50_Q5TVN1 Cluster: ENSANGP00000012667; n=3; Culicidae|Rep:
           ENSANGP00000012667 - Anopheles gambiae str. PEST
          Length = 717

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 40  DRCLNLAYDIFKIKRIYTSSEQQHSDLRSIEQYHPLGGRSSL 81
           DR  +L  D  K+K  YT  +Q+H+ L   + + P+G   SL
Sbjct: 370 DREQSLLADFEKVKTKYTRLKQKHAALEQTQHHQPVGSLQSL 411


>UniRef50_A5ZBR9 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides caccae ATCC 43185|Rep: Putative
           uncharacterized protein - Bacteroides caccae ATCC 43185
          Length = 1018

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 9   VMEHHGKDFIPETEVVGKGVWRVAIIQRKIIDRCLNLAYDIFKIKRIYTSSEQQHSDLRS 68
           ++E+ G +F    +V+    W +++      +R  N   D++   RIYTS E    D   
Sbjct: 749 ILENRGFEFGVNMKVLDTNDWLLSLRGNIAYNR--NKVIDLYYADRIYTSEEALLPDYEV 806

Query: 69  IEQYHPLGGRSSLCRKPQRG 88
            + Y  + G SSL   P  G
Sbjct: 807 GKSYDMIYGPSSLGINPLTG 826


>UniRef50_Q54UU6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 374

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%)

Query: 27  GVWRVAIIQRKIIDRCLNLAYDIFKIKRIYTSSEQQHSDL---RSIEQYHPLGGRSSLCR 83
           G W   +  RKI++ CL   + I+ IK +    E +  +     + E+Y P   +++  +
Sbjct: 194 GPWNGLVQVRKIVEDCLKNIHPIYNIKELMIKRELEKDETLKNENWERYLPQFKKTNQNK 253

Query: 84  KPQRGDQNEMRESFPMTP 101
           K +   + + R++ P  P
Sbjct: 254 KKKVQKKKKDRDAAPFAP 271


>UniRef50_Q6UB92 Cluster: Putative uncharacterized protein; n=1;
           Staphylococcus aureus|Rep: Putative uncharacterized
           protein - Staphylococcus aureus
          Length = 488

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 16  DFIPETEVVGKGVWRVAIIQRKIIDRCLNLAYDIFKIKRIYTSSEQQHSDLRS 68
           ++I    ++ KG+  +A I RK +D C  + +     K++YTS ++  + L+S
Sbjct: 92  NYIKNEYLINKGI-SIASIHRKTVDWCNQMNHPTPSYKQVYTSIKKVSNHLKS 143


>UniRef50_Q15Z39 Cluster: Carboxyl transferase; n=3;
          Proteobacteria|Rep: Carboxyl transferase -
          Pseudoalteromonas atlantica (strain T6c / BAA-1087)
          Length = 537

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 6  YHTVMEHHGKDFIPETEVVGKGVWRVAIIQRKIIDRCLNLAYDIFKIKRIYTSSEQQHSD 65
          +HT ++ HG+ F   T V+ + V  +  I++++I      A     IKR      ++ S 
Sbjct: 4  FHTQLDEHGESFKQNTLVMHEAVLEIRAIEKRVIQLADEKAPRY--IKRGLIPPRERLS- 60

Query: 66 LRSIEQYHPLGGRSSLCRKPQRGD 89
           R ++   P    SSLC   Q GD
Sbjct: 61 -RLLDPGAPFLELSSLCGYMQEGD 83


>UniRef50_P47506 Cluster: Dephospho-CoA kinase; n=2; Mycoplasma
           genitalium|Rep: Dephospho-CoA kinase - Mycoplasma
           genitalium
          Length = 198

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 6   YHTVMEHHGKDFIPETEVVGKGVWRVAIIQRKIIDRCLNLAYDIFKIKRIYTSSEQQHSD 65
           Y  +M+H GK+F+ +TEV  K +        K+I++ L+L      I  I +   Q    
Sbjct: 46  YQLIMDHFGKEFVNQTEVDRKKLANYVFSDDKLIEK-LSLVTKPLLIAWIKSLKTQFQKK 104

Query: 66  LRSIE 70
           L  IE
Sbjct: 105 LALIE 109


>UniRef50_Q1NI09 Cluster: Sensor protein; n=1; Sphingomonas sp.
           SKA58|Rep: Sensor protein - Sphingomonas sp. SKA58
          Length = 996

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 14/46 (30%), Positives = 28/46 (60%)

Query: 35  QRKIIDRCLNLAYDIFKIKRIYTSSEQQHSDLRSIEQYHPLGGRSS 80
           QR +++     A    +++RI   ++++  DLRSIE+ + L GR++
Sbjct: 132 QRHLLNLLARQATTQMELRRIVALTDRRADDLRSIEERYRLAGRAT 177


>UniRef50_Q1FJZ5 Cluster: Transcription termination factor Rho; n=3;
           Clostridiales|Rep: Transcription termination factor Rho
           - Clostridium phytofermentans ISDg
          Length = 650

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 15  KDFIPETEVVGKGVWRVAIIQRKIIDRCLNLAYDIFKIKRIYTSSEQQHSDLRSIEQYHP 74
           ++ I     + KG   VA I +   D+ + L  +  K+    T   +Q  + R +E  H 
Sbjct: 31  QELIDALNALEKGQGSVASINKSTDDKPIKLGTEEVKLA---TEDTKQSVENRGMESSHM 87

Query: 75  LGGRSSLCRK-PQRGDQNEMRESFPMTPKG 103
            G R+++ R+ P++  Q+E+ ++ P   KG
Sbjct: 88  QGNRNNVIRRLPEQNRQHELVKA-PDQSKG 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.321    0.137    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,904,715
Number of Sequences: 1657284
Number of extensions: 4410976
Number of successful extensions: 8497
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 8492
Number of HSP's gapped (non-prelim): 10
length of query: 108
length of database: 575,637,011
effective HSP length: 85
effective length of query: 23
effective length of database: 434,767,871
effective search space: 9999661033
effective search space used: 9999661033
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)