GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000161-TA|BGIBMGA000161-PA|undefined
         (108 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   1.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    22   4.2  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          21   7.4  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    21   9.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    21   9.8  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 75  LGGRSSLCRKPQRGDQNE 92
           LGGR + CR   +GD+ E
Sbjct: 576 LGGRCTDCRPGMKGDKGE 593


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 36  RKIIDRCLNLAYDIFKIKRIYTSSEQQHSDLRSIE 70
           R +ID+   LA    ++K++ TS E+Q   +R+ E
Sbjct: 319 RNVIDQEEQLAAVDDELKKLRTSIEEQEHRIRNRE 353


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 52   IKRIYTSSEQQHSDLRSIEQYHPLGGRSSLCRKPQRGDQNEMRESFPMTPKGTYAL 107
            ++R + +++ Q    R  E +      +     P  G       +FP+TP+  Y L
Sbjct: 1072 VQRAHDNAKLQTIGARE-ESFSSYRSETEPDNSPMGGSPRPETPAFPVTPRTPYGL 1126


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 56  YTSSEQQHSDLRSIEQYHPL 75
           Y+SSE     L S E Y P+
Sbjct: 477 YSSSESDSDSLSSEEFYQPI 496


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 56  YTSSEQQHSDLRSIEQYHPL 75
           Y+SSE     L S E Y P+
Sbjct: 477 YSSSESDSDSLSSEEFYQPI 496


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.137    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,753
Number of Sequences: 2123
Number of extensions: 3858
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 108
length of database: 516,269
effective HSP length: 56
effective length of query: 52
effective length of database: 397,381
effective search space: 20663812
effective search space used: 20663812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)