GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000159-TA|BGIBMGA000159-PA|undefined
         (339 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   2.3  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   5.3  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 169 GLSCVKSAGRISRYASINDIIRRALVSAGVPAILEPNGLVRSDGKRSDGMSI 220
           GL C  +AG+ +R +S+ D+I+     A +   LE       D +R  G  I
Sbjct: 130 GLGC--NAGQTNRCSSLKDLIKHGETQAVIEIHLENTAFNAYDPERYGGRII 179


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 168 HGLSCVKSAGRISRYASINDIIRRALVSAGVPAILEP 204
           HG S     G +  + ++ND+I   +  A    +L P
Sbjct: 153 HGSSVAGGLGSVGSFVAVNDVIGMNITPALSQVLLAP 189


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.138    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,300
Number of Sequences: 2123
Number of extensions: 14127
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 2
length of query: 339
length of database: 516,269
effective HSP length: 64
effective length of query: 275
effective length of database: 380,397
effective search space: 104609175
effective search space used: 104609175
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 48 (23.4 bits)