Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000158-TA|BGIBMGA000158-PA|IPR000172|Glucose-methanol-
choline oxidoreductase, N-terminal, IPR007867|Glucose-methanol-choline
oxidoreductase, C-terminal, IPR012132|Glucose-methanol-choline
oxidoreductase
(564 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 111 1e-24
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 104 2e-22
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 95 2e-19
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 80 5e-15
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 74 3e-13
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 60 5e-09
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 59 1e-08
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 46 8e-05
10_08_0357 - 17158414-17160150,17160534-17160710 45 1e-04
10_08_0354 - 17104223-17106061,17106770-17106794,17107317-171075... 44 3e-04
10_08_0359 - 17167829-17169595,17169976-17169996 43 6e-04
07_03_0375 + 17408815-17409035,17422820-17423477,17423780-174241... 33 0.46
12_01_0082 - 662016-663215 33 0.61
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 32 1.1
09_04_0617 - 18981258-18981949,18983869-18984427 31 3.2
04_04_1158 - 31342934-31343272,31343508-31343658,31343745-313439... 30 4.3
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111... 30 5.6
06_03_1119 + 27760412-27760527,27760851-27761010,27761283-277614... 29 7.5
05_03_0629 + 16376575-16376689,16376792-16376839,16376927-163770... 29 7.5
01_01_0430 + 3258438-3259200,3259929-3261454 29 7.5
07_03_0169 + 14670994-14673714,14673799-14673879,14675460-146756... 29 9.9
04_04_0173 - 23294511-23294601,23294719-23294849,23295160-232954... 29 9.9
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 111 bits (267), Expect = 1e-24
Identities = 141/564 (25%), Positives = 231/564 (40%), Gaps = 64/564 (11%)
Query: 29 FDFVVVGSG-CGAIVADRLSENSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETS 87
+D+++VG G G +A LS+ RVLL+E G P ++ + G ++ D + +S
Sbjct: 49 YDYIIVGGGTAGCPLAATLSQR--FRVLLLERGGSPYDDERI-GNMTRFADTLSDTSPSS 105
Query: 88 IPESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWASYLGDDSWSSANVRK 147
+ G S + LGGGS IN + R D + LG W
Sbjct: 106 PAQRFVSED--GVIN-SRPRVLGGGSCINAGFYTRAS----DEYVRGLG---W------- 148
Query: 148 YFKKSENMLDADIMASHADYHGTEGPVMVSRQPDDATHNLLKAFSDIGVPTVIDLNADDN 207
D+ A+ A Y E V + L + + G+ D
Sbjct: 149 -----------DLEATTAAYRWVEDVVAFQPELGPWQSALERGLLEAGIAPQNGFTFDHL 197
Query: 208 VGCAEASYIIGDGVRQSTAYAYLNKKTRDNLYVLTETLAEKIIIE-----NDIAKGVILR 262
G I R+ TA L D + VL KI+ +A GV+
Sbjct: 198 GGTKVGGSIFDAEGRRHTAADLLRYARTDGIDVLLRARVAKILFNVRAGRRPVAHGVVFH 257
Query: 263 LASGKKINVYASK----EVIISAGSFNSPKILMLSGIGPADHLKSMGIDVIKDLP-VGQG 317
+ G+ Y S E+I+SAG+ SP++LMLSG+GPADHL+S GI ++ + P VGQG
Sbjct: 258 DSEGQMHRAYLSNGRGNEIILSAGAMGSPQLLMLSGVGPADHLRSFGITLVLNQPAVGQG 317
Query: 318 MQDH--NALFLVNKLEESTATSETLPLTKFPFPILLAS-----VNLDDSKSYADYLLIGL 370
M D+ NA+++ + + + + +T+ I AS V S + G+
Sbjct: 318 MSDNPMNAIYVPSPSPVEVSLIQVVGITEVGSYIEGASGANWGVRRSGSGGDRPHRNFGM 377
Query: 371 VFAQDKGYTDV----TCSTLFSFTDEICSNFSESVAGRNQFISLIGTSQPKSRGYVQLKS 426
Q V + E S ++ A R FI L P S G+++L++
Sbjct: 378 FSPQTGQLATVPPKQRTPEAIARAAEAMSQLDDT-AFRGGFI-LEKILGPLSTGHLELRN 435
Query: 427 SDPDDKLVISESFYSDPEDFTNMLKYLTHFLTIYNSAYFQDIKAEI--ADPGLEECGEMD 484
+PDD ++ ++++ PED + ++ + S F + + L
Sbjct: 436 RNPDDNPSVTFNYFAHPEDLRRCVAGVSVIERVIRSEAFANFTYPYFSVETLLNMTAGFP 495
Query: 485 V-------SSEDYWKCYIKSMTVHLFHYSGTCAMGSVVDSKMKVYGIDNLRVVDVSTMPF 537
V + + + K + ++HY G C + VVD++ +V G+D LRV+D ST
Sbjct: 496 VNLRPRHDNDSTSLEQFCKDTVMTIWHYHGGCQVNRVVDAEYRVIGVDALRVIDGSTFNA 555
Query: 538 IVRANTLAAGIMMAEKISDDIKNE 561
N A +M+ + I+NE
Sbjct: 556 SPGTNPQATVMMLGRYMGVKIQNE 579
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 104 bits (249), Expect = 2e-22
Identities = 142/555 (25%), Positives = 230/555 (41%), Gaps = 69/555 (12%)
Query: 29 FDFVVVGSG-CGAIVADRLSENSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETS 87
+D++++G G G +A LSE RVLL+E G P +++ + + + + +TS
Sbjct: 43 YDYIIIGGGTAGCPLAATLSER--YRVLLLERGGSPYDDARVLN----MAHFADVLADTS 96
Query: 88 IPESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWASYLGDDSWSSANVRK 147
+ + + + LGGGS IN R Y+ W V
Sbjct: 97 GASPSQRFVSEDGVINARPRVLGGGSCINAGFFTRAGP-------GYVRALGWDPKEVVS 149
Query: 148 YFKKSENMLDADIMASHADYHGTEGPVMVSRQPDDATHNLLKAFSDIGVPTVIDLNADDN 207
++ E D++A + GP + L + +IGV D
Sbjct: 150 AYQWVE-----DVVAFQPEL----GPWQAA---------LRRGLLEIGVVPDNGFTYDHI 191
Query: 208 VGCAEASYIIGDGVRQSTAYAYLNKKTRDNLYVLTETLAEKIIIEND----IAKGVILRL 263
+G I R+ TA L D + V +I+ +A+GV+
Sbjct: 192 LGTKVGGSIFDAQGRRHTAADLLRYSRPDGIDVFLRARVARIVFSRKGTKPVARGVLYHD 251
Query: 264 ASGKKINVY----ASKEVIISAGSFNSPKILMLSGIGPADHLKSMGIDVIKDLP-VGQGM 318
A G Y A E+I+SAG+ SP++LMLSG+GPADHL+ GI ++ D P VGQGM
Sbjct: 252 ARGGSHMAYLNHGARNEIILSAGALGSPQLLMLSGVGPADHLEEFGISLVLDHPGVGQGM 311
Query: 319 QDH--NALFLVNKLEESTATSETLPLTKFPFPILLASVNLDDSK----SYADYLLIGLVF 372
D+ NA+++ + + + + +T+F I AS + +S+ + A G+
Sbjct: 312 SDNPMNAIYVPSPSPVELSLIQVVGITRFGSYIEGASGSDWNSRTSGAAAAQVRSFGMFS 371
Query: 373 AQDKGYTDV----TCSTLFSFTDEICSNFSESVAGRNQFISLIGTSQPKSRGYVQLKSSD 428
Q V + E S ++ A R FI L P+S G + L++ D
Sbjct: 372 PQTGQLATVPPKQRTPEAIARAVEAMSQVPDA-ALRGGFI-LEKVLGPQSTGRLALRNLD 429
Query: 429 PDDKLVISESFYSDPEDFTNMLKYLTHFLTIYNSAYFQ-------------DIKAEIADP 475
PDD +S +++S P+D + + S F ++ AE
Sbjct: 430 PDDNPTVSFNYFSHPDDLRRCAAGIATIERVIRSRAFSRFAYPNFAFPATINVTAEFPAN 489
Query: 476 GLEECGEMDVSSEDYWKCYIKSMTVHLFHYSGTCAMGSVVDSKMKVYGIDNLRVVDVSTM 535
+ G D + + + C MT+ +HY G C +G VVD +V GI+ LRV+D ST
Sbjct: 490 LMRMRGGSDPRALEQF-CRDTVMTI--WHYHGGCQVGRVVDRDYRVLGIEALRVIDGSTF 546
Query: 536 PFIVRANTLAAGIMM 550
N A +M+
Sbjct: 547 NASPGTNPQATVMML 561
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 94.7 bits (225), Expect = 2e-19
Identities = 135/568 (23%), Positives = 233/568 (41%), Gaps = 72/568 (12%)
Query: 28 TFDFVVVGSG-CGAIVADRLSENSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNET 86
+++++V+G G G +A LSE+S RVLL+E G P Q+ + +T
Sbjct: 53 SYNYIVIGGGTAGCPLAATLSEHS--RVLLLERGGLPY------ANMSSEQHFTDALADT 104
Query: 87 SIPESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWASYLGDDSWSSANVR 146
S + + + LGGGS +N + R + Y+ W + V
Sbjct: 105 SPASPAQRFISEDGVVNARARVLGGGSCLNAGFYTRASNE-------YVRASGWDARLVN 157
Query: 147 KYFKKSENMLDADIMASHADYHGTEGPVMVSRQPDDATHNLLKAFSDIGVPTVIDLNADD 206
++ E L + P P A L A ++GV D
Sbjct: 158 SSYRWVERSL----------VFRPDVP------PWQAA--LRDALLEVGVTPDNGFTFDH 199
Query: 207 NVGCAEASYIIGDGVRQSTAYAYLNKKTRDNLYVLTETLAEKIIIEND------IAKGVI 260
G I + ++ TA +L L VL +I+ ++ +A GV+
Sbjct: 200 VTGTKIGGTIFDNSGQRHTAADFLRHARPRGLTVLLYATVSRILFKSQDGVPYPVAYGVV 259
Query: 261 LRLASGKKINVYA----SKEVIISAGSFNSPKILMLSGIGPADHLKSMGIDVIKDLP-VG 315
G + VY EVI+SAG+ SP++LMLSG+GP HL++ GI+VI D P VG
Sbjct: 260 FSDPLGVQHRVYLRDGDKNEVIVSAGTLGSPQLLMLSGVGPQAHLEAHGIEVIVDQPMVG 319
Query: 316 QGMQDH--NALFLVNKLEESTATSETLPLTKFPFPILLASVNLDDSKSYADYLLIGLVFA 373
QG+ D+ N++F+ + + + + + +T+ I S + +D L +A
Sbjct: 320 QGVADNPMNSVFIPSPVPVELSLVQVVGITRSGSFIEGVS-GSEFGMPVSDG---ALRWA 375
Query: 374 QDKGYTDVTCSTLFSF-----TDEICSNFSESV------AGRNQFISLIGTSQPKSRGYV 422
+ G L + T E +E++ A R FI L P S G+V
Sbjct: 376 RSFGMLSPQTGQLGTLPPKQRTPEALQRAAEAMMRLDRRAFRGGFI-LEKILGPVSSGHV 434
Query: 423 QLKSSDPDDKLVISESFYSDPEDFTNMLKYLTHFLTIYNSAYFQDI---KAEIADPGLEE 479
+L+++DP ++ +++ + ED + + + S F + A + +
Sbjct: 435 ELRTTDPRANPSVTFNYFREAEDLERCVHGIETIERVIQSRAFSNFTYANASVESIFTDS 494
Query: 480 CG------EMDVSSEDYWKCYIKSMTVHLFHYSGTCAMGSVVDSKMKVYGIDNLRVVDVS 533
V+ + Y + ++HY G C +G+VVD +V+G+ LRV+D S
Sbjct: 495 ANFPVNLLPRHVNDSRSPEQYCMDTVMTIWHYHGGCHVGAVVDDDYRVFGVQGLRVIDSS 554
Query: 534 TMPFIVRANTLAAGIMMAEKISDDIKNE 561
T + N A +M+ + I++E
Sbjct: 555 TFKYSPGTNPQATVMMLGRYMGVKIQSE 582
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 79.8 bits (188), Expect = 5e-15
Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 20/299 (6%)
Query: 269 INVYASKEVIISAGSFNSPKILMLSGIGPADHLKSMGIDVI-KDLPVGQGMQDH--NALF 325
+N E+I+SAG+ SP++L+LSGIGP + L+S I V+ + VG+GM D+ N++F
Sbjct: 271 LNSNCDSEIIVSAGAIGSPQLLLLSGIGPKNDLRSHKIPVVLHNKYVGKGMADNPMNSIF 330
Query: 326 LVNKLEESTATSETLPLTKFPFPILLASVNLDDSKSYADYLLIGLVFAQDKGYTDVTCST 385
+ K + ET+ +T+ + AS S + + G++ A+ + +
Sbjct: 331 IPTKSPPRQSLIETVGITEAGV-FIEASSGFGQSPE-SIHCHHGIMSAEIGQLSTIPPKE 388
Query: 386 LFSFTDEICSNFSESVAG---RNQFISLIGTSQPKSRGYVQLKSSDPDDKLVISESFYSD 442
+ +N ++ FI L P S G++ L +D ++ +++S
Sbjct: 389 RSLEKAQKYANTKLNLPKEIFHGGFI-LEKIDGPLSTGHLALIDTDVKKNPAVTFNYFSH 447
Query: 443 PEDFTNMLKYLTHFLTIYNSAYFQDIKAEIADPGLEECGEMDVSSE-----------DYW 491
P+D T + + I + F ++ A +E M V + +
Sbjct: 448 PQDLTRCVYGIKTIERILKTNRFSELSANTDGHSMERVLNMSVQANVNLIPKHTNDTESL 507
Query: 492 KCYIKSMTVHLFHYSGTCAMGSVVDSKMKVYGIDNLRVVDVSTMPFIVRANTLAAGIMM 550
+ + + + ++HY G C +G VVD + +V G+ +RVVD ST N A +MM
Sbjct: 508 EQFCRDTVITIWHYHGGCHVGKVVDQQHRVLGVSGVRVVDGSTFSRSPGTNPQATVMMM 566
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 73.7 bits (173), Expect = 3e-13
Identities = 125/554 (22%), Positives = 226/554 (40%), Gaps = 51/554 (9%)
Query: 27 DTFDFVVVGSG-CGAIVADRLSENSSVRVLLIEAGTYP-SNESIMPGTFPLLQNSYEDWN 84
+ +D+++VG G G +A LS+ +VLL+E G P N +I L+N +
Sbjct: 48 EAYDYIIVGGGTAGCPLAATLSQK--YKVLLLERGGSPYGNRNISH-----LENFHICLA 100
Query: 85 ETSIPESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWASYLGDDSWSSAN 144
+ S + + K LGGG+++N + R D + + + S
Sbjct: 101 DDSPNSPSQGFISTDGVINARAKVLGGGTSVNAGFYSRADPSK-NVIVKVIAEIPTIS-- 157
Query: 145 VRKYFKKSENMLDADIMASHADYHGTEGPVMVSRQPDDATHNLLKAFSDIGVPTVIDLNA 204
F + DA+++ + Y E ++ L + GV +
Sbjct: 158 ----FVQDAGW-DAELV--NQSYPWIEERIVYWPNITPWQAALRDGLLEAGVSPYNGYSY 210
Query: 205 DDNVGCAEASYIIGDGVRQSTAYAYLNKKTRDNLYVLTETLAEKIII--ENDIAK----G 258
D G I + + TA L +NL VL +II E + K G
Sbjct: 211 DHLFGTKVGGTIFDEAGYRHTAADLLAAGNHNNLRVLLHASVTRIIFNTEQEHRKPRTIG 270
Query: 259 VILRLASGKKINVYASK----EVIISAGSFNSPKILMLSGIGPADHLKSMGIDVI-KDLP 313
V + +G + + + ++ E+IISAG+ SP++L+LSGIGP LK I V+ ++
Sbjct: 271 VEFKDENGGQQHAFLTRNRDSEIIISAGAIGSPQLLLLSGIGPRKELKKHNISVVLRNEH 330
Query: 314 VGQGMQDH--NALFLVNKLEESTATSETLPLTKFPFPILLASVNLDDSKSYADYLLIGLV 371
VG+GM D+ N++F+ K + +T+ +T + AS S + G++
Sbjct: 331 VGKGMSDNPMNSIFIPTKDAPKQSLIQTVGITD-GGAFIEASSGFSQSPD-SIQCHHGIM 388
Query: 372 FAQDKGYTDVTCS--TLFSFTDEICS--NFSESVAGRNQFISLIGTSQPKSRGYVQLKSS 427
A+ + + L + + N + V +S I P S G + L +
Sbjct: 389 SAEIGQLSTIPPKQRNLDAVKKYVHKKYNLPKEVFSGGFILSKI--DGPLSTGNLVLVDT 446
Query: 428 DPDDKLVISESFYSDPEDFTNMLKYLTHFLTIYNSAYFQDIKAEIADPGLEECGEMDVSS 487
D + ++ +++ P+D + + + I + +F + +E M V++
Sbjct: 447 DINSNPTVTFNYFQHPKDLSRCVYGIKTIERILKTNHFTNFTLNGGGYPMEVVLNMSVTA 506
Query: 488 -----------EDYWKCYIKSMTVHLFHYSGTCAMGSVVDSKMKVYGIDNLRVVDVSTMP 536
+ + + V ++HY G C +G VVD + +V G+ LRV+D ST+
Sbjct: 507 NINLIPKHTNDSTSMEQFCRDTVVTIWHYHGGCHVGKVVDQQYRVIGVSGLRVIDGSTLF 566
Query: 537 FIVRANTLAAGIMM 550
N A +MM
Sbjct: 567 RSPGTNPQATVMMM 580
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 60.1 bits (139), Expect = 5e-09
Identities = 75/298 (25%), Positives = 120/298 (40%), Gaps = 35/298 (11%)
Query: 276 EVIISAGSFNSPKILMLSGIGPADHLKSMGIDVIKDLPVGQGMQDHNALFLVNKLEESTA 335
EVI+SAGS SP++L+LSGIGPA+ L S+G +PV + D N +
Sbjct: 301 EVILSAGSLGSPQLLLLSGIGPANDLTSLG------IPVFADVPDVGKHMFDNP-RNGIS 353
Query: 336 TSETLPLTKFPFPIL-LASVNLDDSKSYADYLLIGLVFAQDKGYTDVTCSTLFSFTDEIC 394
++P+ ++ + S N ++S A ++ L +G S L+ I
Sbjct: 354 IIPSIPIDHSLIQVVGIPSANGNESYLEAASYIVPLAPILRRGGPFSPSSPLYVTVVTIM 413
Query: 395 SNFSESVAGRNQFISLIGTSQPKSRGYVQLKSSDPDDKLVISESFYSDPEDFTNMLKYLT 454
E V G P S G + L SS+P + + ++ S ED + +
Sbjct: 414 ----EKVPG------------PLSEGSLWLTSSNPLESPSVRFNYLSRREDLARCVTGMR 457
Query: 455 HFLTIYNSAYFQDIKAEIA----DPGLEECGEMDVSSEDYWKC-------YIKSMTVHLF 503
+ S ++ + D E + + W+ + + L+
Sbjct: 458 RVAKVLESTTMDVFRSAMGSLSQDSRRREFRIVGAALPVDWRTNDTALGDFCQQTVATLW 517
Query: 504 HYSGTCAMGSVVDSKMKVYGIDNLRVVDVSTMPFIVRANTLAAGIMMAEKISDDIKNE 561
HY G C GSVVD +V+ + LRVVD ST N A +MM I + +E
Sbjct: 518 HYHGGCVAGSVVDRDFRVFRVRALRVVDGSTFRETPGTNPQATIMMMGRYIGQKMIDE 575
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 58.8 bits (136), Expect = 1e-08
Identities = 34/98 (34%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Query: 255 IAKGVILRLASGKKINVY----ASKEVIISAGSFNSPKILMLSGIGPADHLKSMGIDVIK 310
+A GV+ +G + +VY A EVI++AG+ SP++LMLSG+GP L+ GI +
Sbjct: 249 VAYGVVFTDPAGVRHHVYLRGGAKSEVIVTAGTLGSPQLLMLSGVGPRGELEKHGILPVL 308
Query: 311 DLP-VGQGMQDH--NALFLVNKLEESTATSETLPLTKF 345
D P VGQG+ D+ N++F+ + + + + + + +++F
Sbjct: 309 DQPRVGQGVADNPMNSVFVPSPVPVALSLVQIVGVSRF 346
Score = 58.0 bits (134), Expect = 2e-08
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 416 PKSRGYVQLKSSDPDDKLVISESFYSDPEDFTNMLKYLTHFLTIYNSAYFQ-----DIKA 470
P S G+V L+S+DPD ++ +++ DP D ++ + + S F ++ A
Sbjct: 424 PMSTGHVALRSADPDANPAVTFNYFRDPRDVERCVRGIETIERVVRSRAFARFTYANVTA 483
Query: 471 EIADPGLEECGEMDVS-----SEDY--WKCYIKSMTVHLFHYSGTCAMGSVVDSKMKVYG 523
A G + V+ + D + Y + + ++HY G C +G+VVD +V G
Sbjct: 484 MEAAVLGRRAGHLPVNLLPRRATDTRPLQQYCRETVMTIWHYHGGCHVGAVVDQDYRVLG 543
Query: 524 IDNLRVVDVSTMPFIVRANTLAAGIMMAEKISDDIKNE 561
+ LRVVD ST + N A +M+ + I+ E
Sbjct: 544 VRGLRVVDSSTFKYSPGTNPQATVMMLGRYMGLKIQKE 581
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 46.0 bits (104), Expect = 8e-05
Identities = 65/275 (23%), Positives = 109/275 (39%), Gaps = 33/275 (12%)
Query: 30 DFVVVGSGCGAIVADRLSENSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIP 89
D +VGSGCG VA + + +V++IE G Y ++ P + YE
Sbjct: 283 DVAIVGSGCGGGVAAAVLAGAGHKVVVIEKGNYFTSRDYTSFEGPSINQLYESGGFV--- 339
Query: 90 ESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWASYLGDDSWSSANVRKYF 149
TT + G L G +GGGS +N L+ + WA+ G +++ + Y
Sbjct: 340 --TTMN---GGGLLLAGSTVGGGSAVNWSACLKTPEFVRREWAAAHGLPLFATPD---YA 391
Query: 150 KKSENMLDADIMASHADYHGTEGPVMVSRQPDDATHNLLKAFSDIGVPT-VIDLNADDNV 208
+ + + + S G + V L K +G + N+ +
Sbjct: 392 AAMDKVFERLGVTSGCTEEGLQNKV------------LRKGCEKLGYKVDAVARNSSEGH 439
Query: 209 GCAEASYIIGDGVRQSTAYAYLNKKTRDNLYVLTETLAEKIIIENDIAK-----GVILRL 263
C + G ++ T +L +LT AEK+++E A+ GV+ R
Sbjct: 440 YCGSCGFGCRTGDKRGTDTTWLVDAVGRGAVILTGCKAEKLVLERGGARGRRCVGVVARS 499
Query: 264 ---ASGKKINVYASKEVIISAGSFNSPKILMLSGI 295
A K + V A K + +AGS +P +L SG+
Sbjct: 500 TNPAITKTLEVRA-KVTVSAAGSLLTPVLLQRSGL 533
>10_08_0357 - 17158414-17160150,17160534-17160710
Length = 637
Score = 45.2 bits (102), Expect = 1e-04
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
Query: 30 DFVVVGSGCGAIVADRLSENSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIP 89
D VVVGSGCG VA + + +V+++E G Y + E P ++ YE
Sbjct: 136 DAVVVGSGCGGGVAAAVLASKGYKVVVVEKGDYFATEDYTSLEGPSMERLYEKGGVFGTS 195
Query: 90 ESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWA 132
TT L TG +GGGS +N +R + + W+
Sbjct: 196 NVTT--------ILFTGATVGGGSAVNWSACIRTPAEIREEWS 230
>10_08_0354 -
17104223-17106061,17106770-17106794,17107317-17107561,
17108432-17108677
Length = 784
Score = 44.0 bits (99), Expect = 3e-04
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 30 DFVVVGSGCGAIVADRLSENSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIP 89
D VVVGSGCG VA + ++ +V+++E G Y + P ++ YE+ S
Sbjct: 262 DAVVVGSGCGGGVAAAVLASAGYKVVVVEKGDYFAARDYSSLEGPTMERLYENGGVFSTA 321
Query: 90 ESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWAS 133
TT + G +GGGS +N +R + W++
Sbjct: 322 NVTT--------TMFAGATVGGGSAVNWSACIRTPANVLQEWSN 357
>10_08_0359 - 17167829-17169595,17169976-17169996
Length = 595
Score = 43.2 bits (97), Expect = 6e-04
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 34/277 (12%)
Query: 30 DFVVVGSGCGAIVADRLSENSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIP 89
D V+VGSGCG VA + ++ +V+++E G Y + E P ++ +E
Sbjct: 88 DAVIVGSGCGGGVAAAVLASAGYKVVVVEKGDYFTKEDYSSIEGPSMERLFERGGVFCTS 147
Query: 90 ESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWASYLGDDSWSSANVRKYF 149
TT + TG +GGGS +N +R W+ G ++S Y
Sbjct: 148 NVTT--------MIFTGATVGGGSAVNWSASIRTPAGVMQEWSREHGLAVFASPG---YA 196
Query: 150 KKSENMLDADIMASHADYHGTEGPVMVSRQPDDATHNLLKAFSDIGVPTVIDLNADDNVG 209
+ + + + + G + V+ R+ DA L+A + N+ +
Sbjct: 197 RAMDAVCERLGVTDACREEGFQNKVV--RRGCDALG--LRA-------DAVPRNSSEGHF 245
Query: 210 CAEASYIIGDGVRQSTAYAYLNKKTRDNLYVLTETLAEKIIIENDIAKG---------VI 260
C ++ G ++ T +L +LT AE I+E++ G V
Sbjct: 246 CGSCNFGCPTGDKKGTDTTWLVDAVERGAVILTGCKAEHFIVESNGGGGGRSKRCVGLVA 305
Query: 261 LRLASG--KKINVYASKEVIISAGSFNSPKILMLSGI 295
+++G KK+ V A K I ++G+ +P +L SG+
Sbjct: 306 TCMSNGITKKLRVEA-KVSISASGALMTPPLLRNSGL 341
>07_03_0375 +
17408815-17409035,17422820-17423477,17423780-17424161,
17424236-17424550,17424727-17425118,17432479-17432508
Length = 665
Score = 33.5 bits (73), Expect = 0.46
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 86 TSIPESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWASY 134
+S+P ST Q++ K K +GGG TI+ L G ++ W S+
Sbjct: 47 SSMPSSTLGQQQVSRCKRGAVKEMGGGMTIHFHLFELGFMPSYNCWTSH 95
>12_01_0082 - 662016-663215
Length = 399
Score = 33.1 bits (72), Expect = 0.61
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 370 LVFAQDKGYT---DVTCSTLFSF----TDEICSNFSESVAGRNQFISLIGTSQPKSRGYV 422
++FA G+T D ST+F+F +D+ C+ S S+ N ++ G + YV
Sbjct: 104 ILFADHSGHTIVFDADSSTVFAFPNLISDKGCAAISLSIKNNNTNKNISGGMWDEDSLYV 163
Query: 423 QLKSSDPDDKLVISE--SFYSDPEDFTNMLKY 452
+S+DP+ K E ++ S +DF Y
Sbjct: 164 MSQSADPETKDYCFEVLNYTSSCKDFRGRTPY 195
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 32.3 bits (70), Expect = 1.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 24 QDGDTFDFVVVGSGCGAIVADRLSENSSVRVLLIEAGTYPSNES 67
+ G +D +VVGSG G +VA RVL++E P S
Sbjct: 64 EGGGEYDAIVVGSGIGGMVAATQLAAKGARVLVLEKYVIPGGSS 107
>09_04_0617 - 18981258-18981949,18983869-18984427
Length = 416
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 24 QDGDTFDFVVVGSG-CGAIVADRLSENSSVRVLLIE 58
+ GD FD +VVG+G G+ A S RVLL+E
Sbjct: 10 EGGDGFDVIVVGAGIMGSCAAYAASTRGGARVLLLE 45
>04_04_1158 -
31342934-31343272,31343508-31343658,31343745-31343976,
31344173-31344284,31344572-31344690,31344772-31344936,
31345049-31345247,31345351-31345733,31345838-31345902,
31346003-31346047,31346402-31346467,31346707-31346778,
31346907-31346981,31347086-31347157,31347255-31347326,
31347954-31348022,31348109-31348180,31348280-31348351,
31348756-31348827,31349295-31349366,31349528-31349711,
31350082-31350220
Length = 948
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 494 YIKSMTVHLFHYSGTCAMGSVVDSKMKVYGIDNLRVVDV----STMPFIVRANTLAAGIM 549
YI S + + G GS+ + K+ + NLR+ D+ S++ FI +L+ ++
Sbjct: 218 YIGSWNLTDLRFQGNSFQGSIPATLSKLVQLTNLRIGDIENGSSSLAFISNMTSLSILVL 277
Query: 550 MAEKISDDI 558
KISD++
Sbjct: 278 RNCKISDNL 286
>03_01_0141 +
1116833-1117082,1117658-1118574,1119417-1119579,
1119668-1120497,1120562-1120570
Length = 722
Score = 29.9 bits (64), Expect = 5.6
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 18/122 (14%)
Query: 77 QNSYEDWNETSIPESTTKHQKIGAYKLSTGKALGGGSTINHLL------HLRGDKDDFDT 130
+ S E+ ETS + T A + T K+ G ++N ++ + K D DT
Sbjct: 536 EGSDEEQQETSNNKKTNGFDNTAAVSMDTLKS--GDDSMNSVVVEPIKERVESSKTDVDT 593
Query: 131 WASYL-------GDDSWSSANVRKYFKKSENMLDADIMASHADYHGTEGPVMVSRQPDDA 183
A + G S S + K+ + D +MA H D+ +G + R DD
Sbjct: 594 AAPFYSFVKRLSGSSSSSDVDFDKFLSSIKKQTDVTVMARHKDFVCDKGNI---RSLDDT 650
Query: 184 TH 185
T+
Sbjct: 651 TN 652
>06_03_1119 +
27760412-27760527,27760851-27761010,27761283-27761449,
27761525-27761629,27762097-27762864,27762942-27763131,
27763763-27763940,27764106-27764497
Length = 691
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 391 DEICSNFSESVAGRNQFISLIGTSQPKSRGYVQLKSSDPDDKLVISESFYSDPEDFTNML 450
D+I NFS A N+ I L +S+G+ + ++ +++++ ++DP D +
Sbjct: 167 DKISDNFSNYSAWHNRSILLSNLLIKQSKGFESKQKIFSEEFELVTQALFTDPSDQSGWF 226
Query: 451 KYL 453
+L
Sbjct: 227 YHL 229
>05_03_0629 +
16376575-16376689,16376792-16376839,16376927-16377012,
16377791-16377878,16378387-16378472,16378604-16378690,
16379111-16379293,16379387-16379470,16379590-16379651,
16379752-16379827,16379906-16379968,16380060-16380141,
16380840-16380916,16381502-16381549,16381681-16381743
Length = 415
Score = 29.5 bits (63), Expect = 7.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 107 KALGGGSTINHLLHLRGDKDDFDTW 131
KA GGS+ N LL ++G K + D W
Sbjct: 62 KAPAGGSSFNQLLGIKGAKQENDIW 86
>01_01_0430 + 3258438-3259200,3259929-3261454
Length = 762
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 9/54 (16%)
Query: 455 HFLTIYNSAYFQDIKAEIADPGL-EECGEMDVSSEDYWKCYIKSMTVHLFHYSG 507
HFLT++NS++ ++ A + P L EC SSE+ KS+ V LF + G
Sbjct: 696 HFLTLHNSSFIRN--AGLCGPPLSNECSNKSTSSEE------KSVDVMLFLFVG 741
>07_03_0169 +
14670994-14673714,14673799-14673879,14675460-14675612,
14675910-14676073,14676162-14676309,14676426-14676548,
14676754-14676841,14677493-14677674
Length = 1219
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 412 GTSQPKSRGYVQLKSSDPDDKLVISESFYSD--PEDFTNMLKYL---THFLTIYNSAYFQ 466
G+SQ S GY +SSD ++ I SF P L+Y+ TH + I + +Q
Sbjct: 145 GSSQRLSHGYASSESSDSSRRIKILCSFGGKILPRPSDGKLRYVGGETHIIRISRNISWQ 204
Query: 467 DIK 469
++K
Sbjct: 205 ELK 207
>04_04_0173 -
23294511-23294601,23294719-23294849,23295160-23295483,
23296016-23296147,23296225-23296373,23296536-23296670,
23296997-23297090,23297199-23297318,23298096-23298182,
23298273-23298386,23299089-23299270,23299960-23300023,
23300191-23300337,23300636-23300845,23301048-23301217,
23301355-23301477,23301589-23301661,23301765-23301857
Length = 812
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 150 KKSENMLDADIMASHADYHGTEGPVMVSRQPDDATHNLLKAFSD 193
++++ + + D M H T P +VS PDD+ LL+AF+D
Sbjct: 353 QEAKTLRNKDTMEKHLSPLITFIPDLVSNAPDDSKGYLLEAFTD 396
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,175,343
Number of Sequences: 37544
Number of extensions: 691779
Number of successful extensions: 1468
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1429
Number of HSP's gapped (non-prelim): 42
length of query: 564
length of database: 14,793,348
effective HSP length: 86
effective length of query: 478
effective length of database: 11,564,564
effective search space: 5527861592
effective search space used: 5527861592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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