GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000158-TA|BGIBMGA000158-PA|IPR000172|Glucose-methanol-
choline oxidoreductase, N-terminal, IPR007867|Glucose-methanol-choline
oxidoreductase, C-terminal, IPR012132|Glucose-methanol-choline
oxidoreductase
         (564 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    28   0.76 
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    28   0.76 
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    28   0.76 
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    28   0.76 
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      25   7.1  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 0.76
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 49  NSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIPEST 92
           N+ +R L +    +P     MPG  PL     + +   ++PE T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 0.76
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 49  NSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIPEST 92
           N+ +R L +    +P     MPG  PL     + +   ++PE T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 0.76
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 49  NSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIPEST 92
           N+ +R L +    +P     MPG  PL     + +   ++PE T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 0.76
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 49  NSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIPEST 92
           N+ +R L +    +P     MPG  PL     + +   ++PE T
Sbjct: 143 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 186


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 7.1
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 440 YSDPEDFTN--MLKYLT-HFLTIYNSAYFQDIKAEIADPGLEEC 480
           YSDP +  +  +++ +    +T +   Y Q IK   AD G++EC
Sbjct: 95  YSDPANIEHAELIRSVDFETVTTFEPPYVQAIKDLWADAGIQEC 138


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,711
Number of Sequences: 2123
Number of extensions: 23697
Number of successful extensions: 52
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 5
length of query: 564
length of database: 516,269
effective HSP length: 68
effective length of query: 496
effective length of database: 371,905
effective search space: 184464880
effective search space used: 184464880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)