Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000158-TA|BGIBMGA000158-PA|IPR000172|Glucose-methanol-
choline oxidoreductase, N-terminal, IPR007867|Glucose-methanol-choline
oxidoreductase, C-terminal, IPR012132|Glucose-methanol-choline
oxidoreductase
(564 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 200 2e-51
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF003384-6|AAB54238.2| 451|Caenorhabditis elegans Coenzyme q (u... 31 2.9
AL021479-1|CAA16321.2| 346|Caenorhabditis elegans Hypothetical ... 30 5.0
Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 29 6.6
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 29 6.6
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 29 6.6
U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like pr... 29 6.6
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 29 6.6
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 29 8.7
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 29 8.7
U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical pr... 29 8.7
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 200 bits (489), Expect = 2e-51
Identities = 159/565 (28%), Positives = 266/565 (47%), Gaps = 50/565 (8%)
Query: 32 VVVGSG-CGAIVADRLSENSSVRVLLIEAGTYPSN---ESIMPGTFPLLQNSYEDWNETS 87
++VG+G G ++A+RL+E+ S RVLLIEAG MP L+ N D
Sbjct: 41 IIVGAGSAGCVLANRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAA--LMYNLCSDTYNWH 98
Query: 88 IPESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWASYLGDDSWSSANVRK 147
+ K+ + G+ GG ST+N + ++RG D++ W G W+ AN
Sbjct: 99 YHTTAQKNLGNRVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKE-GASGWNYANCLP 157
Query: 148 YFKKSENMLDADIMASHADYHGTEGPVMVSRQPDDATHNLLKAFSDIGVPTVI----DLN 203
YFKK+E DA + Y G GP+ V + DA + L KA+ ++G + D+N
Sbjct: 158 YFKKAETYSDAT--GPNDPYRGNNGPLYVKK--GDAENPLHKAWLNVGKEHPLGWTNDMN 213
Query: 204 ADDNVGCAEASYIIGDGVRQSTAYAYLNK-KTRDNLYVLTETLAEKIIIENDIAKGV-IL 261
+ G + I +G R S + AY++ + R NL + +++ + + A G+ +
Sbjct: 214 GEKQEGISTMDMTIHNGERWSASKAYVHPIRNRPNLITSSGITCTRVLFDTNKAIGIEFI 273
Query: 262 R---------LASGKKINVYASKEVIISAGSFNSPKILMLSGIGPADHLKSMGIDVIKDL 312
R + S + +Y +VI++ G+ N+P++LMLSG+GPADHL+S I ++ +L
Sbjct: 274 RKLNFVGTDSIDSYSREKIYCQGDVILAGGAINTPQLLMLSGVGPADHLRSHEIPIVANL 333
Query: 313 P-VGQGMQDHNALFLVNKLEESTATSETLPLTKFPFPILLASVNLD-----DSKSYADYL 366
P VGQ +QDH +++ +EST + + FP + + L+ + +L
Sbjct: 334 PGVGQNLQDHLEIYV---QQESTQPVTLYNKSSWKFPHNMIKIGLEWFTNRTGLGASSHL 390
Query: 367 LIGLVFAQDKGYTDVTCSTLFSFTDEICSNFSESVAGRNQFISLIGTSQPKSRGYVQLKS 426
G D T F F + + + + +G + +S+GY+ L++
Sbjct: 391 ETGGFARSDDTVTHPDIQ--FHFLPSTVHDDGRTNGTCHGYQVHVGPMRSQSKGYIMLQA 448
Query: 427 SDPDDKLVISESFYSDPEDFTNMLKYLTHFLTIYNSAYFQDIKAEIADPGLEECGEMDVS 486
DP +I+ ++ + D+ K + ++ S F + + + PG + + D+
Sbjct: 449 KDPRRAPIINPNYMEEDSDWREFRKCIRVSRELFASKAFDEFRGKELAPGPDCQSDADID 508
Query: 487 SEDYWKCYIKSMTVHLFHYSGTCAMGSVVD-------SKMKVYGIDNLRVVDVSTMPFIV 539
++K +H S TC MGS D M VYG +NL+VVD S MP IV
Sbjct: 509 R------FVKEKAASAYHPSCTCKMGSENDKMAVVNPETMGVYGTENLKVVDASVMPSIV 562
Query: 540 RANTLAAGIMMAEKISDDIKNEYSL 564
N A IMMAE+ +D IK++ L
Sbjct: 563 SGNLNAPVIMMAERAADLIKHKKQL 587
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 20 QAIVQDGDTFDFVVVGSGCGAIVADRLSENSSVRVLLIEAG 60
++I+ FD++V+G G G I + R + V V LIE+G
Sbjct: 12 RSIMSGVKEFDYLVIGGGSGGIASARRAREFGVSVGLIESG 52
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 29 FDFVVVGSGCGAIVADRLSENSSVRVLLIEAG 60
FD++V+G G G I + R + V V LIE+G
Sbjct: 7 FDYLVIGGGSGGIASARRAREFGVSVGLIESG 38
>AF003384-6|AAB54238.2| 451|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 6 protein.
Length = 451
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 29 FDFVVVGSGC-GAIVADRLSENSSVR---VLLIEAGTYPSNESIMPG 71
+D V+VG G G +A L N S + VLL++AG PS S PG
Sbjct: 18 YDTVIVGGGMVGNAMACSLGANKSFQSKSVLLLDAGRSPSLASFKPG 64
>AL021479-1|CAA16321.2| 346|Caenorhabditis elegans Hypothetical
protein Y22F5A.2 protein.
Length = 346
Score = 29.9 bits (64), Expect = 5.0
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 345 FPFPILLASVNLDDSK--SYADYLLIGLVFAQDKGYTDVTCSTLFSFTDEICSNF 397
F FPIL+ SV + K S A +LIG++ T V C T SF I S F
Sbjct: 259 FLFPILILSVVILTGKDASGACLVLIGVISFHSSANTLVMCLTFTSFRKAILSFF 313
>Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical
protein T06E6.1 protein.
Length = 431
Score = 29.5 bits (63), Expect = 6.6
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Query: 49 NSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIPES------TTKHQKIGAYK 102
N +++L IE S ++ GT P+ D + ES K + + +K
Sbjct: 57 NRDLQLLGIEENELVSILTVTGGTGPIKGLHKADEKIVTCVESGELQIWNDKSEILSEWK 116
Query: 103 LSTGKALGGGSTINHLLHLRGDKDDFDTWASYLGDDSWSSANV 145
G A+ GST + G K+ TW G +WS+ NV
Sbjct: 117 TGPGVAVMRGSTEKPEIVTGGMKNLLKTWNLETGQQTWSAKNV 159
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 29.5 bits (63), Expect = 6.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 381 VTCSTLFSFTDEICSNFSESVAGRNQFISLIGTSQPKS 418
+T T F D C F +V+ ++ F S+I +S PKS
Sbjct: 611 ITDGTKCVFVDSSCVPFDPTVSYKSSFASMIKSSTPKS 648
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 29.5 bits (63), Expect = 6.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 381 VTCSTLFSFTDEICSNFSESVAGRNQFISLIGTSQPKS 418
+T T F D C F +V+ ++ F S+I +S PKS
Sbjct: 611 ITDGTKCVFVDSSCVPFDPTVSYKSSFASMIKSSTPKS 648
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 49 NSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIPEST 92
N+ +R L + +P MPG PL S + + ++PE T
Sbjct: 247 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELT 290
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 49 NSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIPEST 92
N+ +R L + +P MPG PL S + + ++PE T
Sbjct: 247 NADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELT 290
>U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like
protein family protein10, isoform b protein.
Length = 429
Score = 29.5 bits (63), Expect = 6.6
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 337 SETLPLTKFPFPILLASV--NLDDSKSYADYLLIGLVFAQ--DKGYTDVTCSTLFSFTDE 392
S PL F F + A + + ++Y L+G + + T+ CS L SF
Sbjct: 338 SSVAPLRDFTFQEIQAEKCPKMMELETYLSSNLVGSAMEKFFENSLTETFCSGLLSFFQP 397
Query: 393 ICSNFSESVAGRNQFISLIGTSQPK 417
C SVA R ++ + SQ K
Sbjct: 398 SCQQIMSSVAPRFVSLTAVLASQNK 422
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 29.5 bits (63), Expect = 6.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 381 VTCSTLFSFTDEICSNFSESVAGRNQFISLIGTSQPKS 418
+T T F D C F +V+ ++ F S+I +S PKS
Sbjct: 611 ITDGTKCVFVDSSCVPFDPTVSYKSSFASMIKSSTPKS 648
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 273 ASKEVIISAGSFNSPKILM--LSGIGPADHLKSMGIDVIKDLPVGQGMQDHNALFLVNKL 330
A K V+ S G + +L+ L + A+ L+ ++++DL + D N++ + +L
Sbjct: 205 ALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSSESDENSIKRLVRL 264
Query: 331 EESTATSETLPLTKFP 346
E+ ++TL L+ P
Sbjct: 265 EQ-WKQAKTLTLSPVP 279
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 273 ASKEVIISAGSFNSPKILM--LSGIGPADHLKSMGIDVIKDLPVGQGMQDHNALFLVNKL 330
A K V+ S G + +L+ L + A+ L+ ++++DL + D N++ + +L
Sbjct: 205 ALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSSESDENSIKRLVRL 264
Query: 331 EESTATSETLPLTKFP 346
E+ ++TL L+ P
Sbjct: 265 EQ-WKQAKTLTLSPVP 279
>U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical
protein ZK402.5 protein.
Length = 516
Score = 29.1 bits (62), Expect = 8.7
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 413 TSQPKS--RGYVQLKSSDPDDKLVISESF--YSDPE----DFTNML-KYLTHFLTIYNSA 463
TS P+S R ++ SSD DD L I E+ Y PE DF +L + T+ L I +S
Sbjct: 235 TSLPRSPKRARTEMSSSDDDDDLEIIETVDGYPKPEPVDFDFEELLNRDSTYNLLIDHSQ 294
Query: 464 YFQDIKAEIADPGLEECGEMDVSSEDYWKCYIKSM 498
++++ E + + + S+D YI +M
Sbjct: 295 EYKEVMMEENNQPTIYVKSLQLDSDDDEVQYIGAM 329
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,761,937
Number of Sequences: 27539
Number of extensions: 594878
Number of successful extensions: 1453
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1438
Number of HSP's gapped (non-prelim): 16
length of query: 564
length of database: 12,573,161
effective HSP length: 85
effective length of query: 479
effective length of database: 10,232,346
effective search space: 4901293734
effective search space used: 4901293734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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