Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000157-TA|BGIBMGA000157-PA|IPR004827|Basic-leucine
zipper (bZIP) transcription factor, IPR008917|Eukaryotic transcription
factor, DNA-binding, IPR004826|Maf transcription factor
(122 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 35 0.004
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 31 0.051
SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyc... 30 0.090
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 29 0.21
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.27
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 0.36
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 28 0.36
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 0.48
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 27 0.63
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 27 0.63
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 0.63
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 0.84
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 27 0.84
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 27 1.1
SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 27 1.1
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 26 1.5
SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr... 26 1.5
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 26 1.5
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 26 1.9
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 25 2.5
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 25 3.4
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 3.4
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 25 3.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 3.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 4.5
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 25 4.5
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.5
SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger protein|Schiz... 25 4.5
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 25 4.5
SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyce... 25 4.5
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 4.5
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 24 5.9
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 24 5.9
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 24 5.9
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 24 5.9
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 24 7.8
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 24 7.8
SPAC688.06c |slx4||structure-specific endonuclease subunit |Schi... 24 7.8
SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces pomb... 24 7.8
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 24 7.8
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 24 7.8
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 24 7.8
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 24 7.8
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 24 7.8
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 34.7 bits (76), Expect = 0.004
Identities = 21/73 (28%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 29 KMRGLTRD---QIVRMKQRRRTL-KNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQD 84
K++ LT + +I R+++ + +L K AS ++R++ K +LE ++ Q ++ +Q+
Sbjct: 310 KIKELTSENELKISRLQEEKDSLLKKVQEGASLAMQRVQNKHDLEKKRLQS--AIQPLQE 367
Query: 85 ENNRIREEIEALR 97
ENN ++++IE L+
Sbjct: 368 ENNSLKQQIEQLQ 380
>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 639
Score = 31.1 bits (67), Expect = 0.051
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 79 MELMQDENNRIREEIEALRSKYDALK 104
M+L+ DEN R+RE+I LRS+ L+
Sbjct: 612 MKLIMDENQRLREQIAVLRSRIQHLE 637
>SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 209
Score = 30.3 bits (65), Expect = 0.090
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 42 KQRRRTLKNRGYAASCRIKRIEQKDELENEKS-QEWHDMELMQDENNRIREEIEALRS 98
KQ +NR A CRIK+ + L+++ + + EL+Q N+ +REEI LR+
Sbjct: 123 KQSMLKARNRQAAQKCRIKKKKYLQTLQDQVNYYTSENKELLQSAND-LREEIIKLRT 179
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 29.1 bits (62), Expect = 0.21
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 25 NRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQD 84
N Q K+ + D+I+ + T + G A+ + ++Q + + + W D+ + +
Sbjct: 876 NNQKKLEDMNLDEILEHAEDHDTSNDVGGASMGGEEFLKQFEVTDYKADVSWDDIIPLTE 935
Query: 85 -----ENNRIREEIEALRSKYDALKR 105
E +R+REE EAL+ + + R
Sbjct: 936 REKFEEEDRLREEEEALKQEIELSSR 961
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 28.7 bits (61), Expect = 0.27
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 12 SDDELVSISVRDLNR-QLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELEN 70
S E++ R L + ++++R L R++ K+R + + + I +K ELE
Sbjct: 411 SQPEVLDNLERKLRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEK 470
Query: 71 EKSQEWHDMELMQDENNRIREEIE 94
+ E D + DE E+ E
Sbjct: 471 SRGSELQDAKRRLDELKAKAEDAE 494
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.3 bits (60), Expect = 0.36
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 63 EQKDELENEKSQEWHDMELMQDENNRIREEIE 94
E K+E + EK + D E +ENN + E+I+
Sbjct: 4115 ENKEEADAEKDEPMQDFEDPLEENNTLDEDIQ 4146
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 28.3 bits (60), Expect = 0.36
Identities = 12/46 (26%), Positives = 27/46 (58%)
Query: 60 KRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKR 105
+R D+L + Q + +E ++E +R++E++ AL+ + L+R
Sbjct: 90 QRKSMVDDLRERERQFYDSLEKKENERDRLQEKLRALQEESANLRR 135
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.9 bits (59), Expect = 0.48
Identities = 16/87 (18%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 18 SISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWH 77
++ + + ++K +DQ+V + +N + +I +EQ+ + N +++E
Sbjct: 34 AVFISAIKTKVKDINALKDQLVLQEVNHEHKEN---VLTKKINFLEQQLQSSNNQAEESR 90
Query: 78 DM-ELMQDENNRIREEIEALRSKYDAL 103
++ ++++EN ++ +E ++DAL
Sbjct: 91 NLISVLRNENESLKTNLENQNKRFDAL 117
Score = 23.8 bits (49), Expect = 7.8
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 64 QKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYD 101
+ ++LENE++Q +E ++ +N ++ A R+KY+
Sbjct: 1353 KSEDLENERAQNQSKIEQLELKNTKL---AAAWRTKYE 1387
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 27.5 bits (58), Expect = 0.63
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 40 RMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSK 99
R+ + L N A + + +EQ L +++SQ+ EL++++ N + E +R
Sbjct: 952 RIAELESHLSNYAEAKLAQERELEQTRVLISDQSQDGELKELLEEKENALIMMEEEMRQV 1011
Query: 100 YDA----LKRFATMKS 111
DA L+ AT+KS
Sbjct: 1012 NDANTELLRVNATLKS 1027
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 27.5 bits (58), Expect = 0.63
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 27 QLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDME 80
QLK RG TR+QI + R+ A + R +L+ + Q+ M+
Sbjct: 417 QLKARGATREQITEILNRQAIAAGTDLATVMTVARNLHFQQLQMRQQQQQQQMK 470
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 27.5 bits (58), Expect = 0.63
Identities = 15/60 (25%), Positives = 32/60 (53%)
Query: 53 YAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKRFATMKSI 112
YAAS +++ I + E + +E + ++ + E++ EIE+L+ K + +T + I
Sbjct: 478 YAASPKLEDIADEVETDATSQRELLERQIQKAESSEDTSEIESLQGKLSLPQVSSTQQEI 537
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.1 bits (57), Expect = 0.84
Identities = 16/73 (21%), Positives = 35/73 (47%)
Query: 20 SVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDM 79
++ +LN + ++I + + + + Y R ++ +ELE++ S +
Sbjct: 821 AITELNEEFATSSEVDNKISIEETKLKFMNVNSYVMEQYDARKKEIEELESKMSDFDQSV 880
Query: 80 ELMQDENNRIREE 92
E +QDE N I+E+
Sbjct: 881 EELQDEMNSIKED 893
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 27.1 bits (57), Expect = 0.84
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 10 EISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNR 51
E SDDE + IS++D +R K+R + +V Q R L+ +
Sbjct: 102 EDSDDERLMISLQDHSRLRKLRQYEDEDMVNGLQYARRLRTQ 143
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 26.6 bits (56), Expect = 1.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 46 RTLKNRGYAASCRIKRIEQKDELENEKSQEWH 77
R L + G A+ C I I K+E+ +SQ H
Sbjct: 1018 RRLADAGIASRCEICEINDKNEIVKTRSQRIH 1049
>SPBC14C8.02 |tim44||TIM23 translocase complex subunit
Tim44|Schizosaccharomyces pombe|chr 2|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 1.1
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 32 GLTRDQIVRMKQRRR-TLKNRGYAASCRIKRIEQKDELENEKSQEW-HDMELMQDENNRI 89
G D+ R K R +NR +A+S RI+ E + + W + +E +++E+ +
Sbjct: 166 GFYADKEQRKKLREEFERRNRMFASSARIQPNEDVQSVVVHSNPSWKNKVEQIKNESRLV 225
Query: 90 REEIEALRSKY 100
R +I+ L+ Y
Sbjct: 226 R-KIQELKKSY 235
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 26.2 bits (55), Expect = 1.5
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 49 KNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKRFAT 108
+NR A CR ++ + L+ + ++ E++ + + +REEI +L++ A K
Sbjct: 481 RNRQAALKCRQRKKQWLSNLQAKVEFYGNENEILSAQVSALREEIVSLKTLLIAHKDCPV 540
Query: 109 MKS 111
KS
Sbjct: 541 AKS 543
>SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 1.5
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 11 ISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGY---AASCRIKRIEQKDE 67
I D +L + + +LN + + +TR VR +R L+ G+ ++ +IK+++ D
Sbjct: 174 IEDPQLRRLKLAELNTRAQAISVTRVGFVREAMEKRGLQVHGWIYDLSNGQIKKLDITDA 233
Query: 68 LENEK 72
++ K
Sbjct: 234 IKKAK 238
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 1.5
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 41 MKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSK 99
MK+RR +NR A+ CR K+ LE + ++ +++REE+ L+++
Sbjct: 268 MKRRRFLERNRIAASKCRQKKKLWTQNLEKTAHIACEQSKALRILVSQLREEVICLKNQ 326
>SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1163
Score = 25.8 bits (54), Expect = 1.9
Identities = 17/79 (21%), Positives = 32/79 (40%)
Query: 7 PCAEISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKD 66
P D +L++ + R ++ R + RD + R Y A+ E ++
Sbjct: 946 PFFPAEDKKLITNIRKTQERNIRKRAMKRDPAKPSSAQPRKTFASAYEAAVYDTDDEAEE 1005
Query: 67 ELENEKSQEWHDMELMQDE 85
E EN++ + +L DE
Sbjct: 1006 EFENDEMNNGNGGDLRMDE 1024
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 25.4 bits (53), Expect = 2.5
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 56 SCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKRFATMKSIPLP 115
S + K E + EL+N ++ + Q N+++ + E L+ K L A K++P
Sbjct: 47 SLQEKNAELRAELDNIRNAQAAIRSSKQTLINKVKAQDELLKKKVKELT--AMKKTVPFK 104
Query: 116 AELDI 120
+E+++
Sbjct: 105 SEVEL 109
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.0 bits (52), Expect = 3.4
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 31 RGLTRDQIVRMKQRRRTLKNRG--------YAASCRIKRIEQKDELENEKSQEWHDMELM 82
+GLT+D I + Q+ + ++N+G +A I R+ Q+ + E
Sbjct: 12 KGLTKDNIQSLYQQWQVMRNQGATEENNPEFAQISSILRMVQRAHYARMQQMRNQSSEFP 71
Query: 83 QDENNRIREEIEAL 96
EN +R++ + L
Sbjct: 72 DAENTNLRKQQDTL 85
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.0 bits (52), Expect = 3.4
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 67 ELENEKSQEWHDMELMQDENNRIREEIEALRSKYD-ALKRFATMKSI 112
+L+N+ S+E ++ +Q + N+ + +IE L + A ++M+SI
Sbjct: 803 DLKNKLSEESTRLQELQSQLNQDKNQIETLNERISAAADELSSMESI 849
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.0 bits (52), Expect = 3.4
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 24 LNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQ 83
L++ L + L R ++ K LK + K +++ L+NEK +E Q
Sbjct: 30 LSKALNLAHLLRSDSLQ-KSFLDALKQSATDSELLHKNLDEIKFLQNEKLNNEKLLEQEQ 88
Query: 84 DENNRIREEIEALRSK 99
+E N R ++E L K
Sbjct: 89 NEANDYRLKVERLEHK 104
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.0 bits (52), Expect = 3.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 60 KRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSK 99
K +++KD+ E + + +EN +I++E+ ALR K
Sbjct: 1085 KLLDEKDQRNVELEELTSKYGKLGEENAQIKDELLALRKK 1124
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 24.6 bits (51), Expect = 4.5
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 26 RQLKMRGLTRDQIVRMKQRRRTLKNRGYAAS----CRIKRIEQKDE---LENEKSQEWHD 78
+Q ++ R++ + K+R + LK + A R +R+ +++E LE K +E D
Sbjct: 653 KQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLD 712
Query: 79 MELMQDENNRIREEIE 94
E +E R RE +E
Sbjct: 713 KE---EEERRRRELLE 725
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 24.6 bits (51), Expect = 4.5
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 47 TLKNRGYAASCRIKRIEQKDELENEKSQEWH 77
T KN +C+I + DE ++ +WH
Sbjct: 47 TQKNISSCVNCQIDNLHTLDERKSHIKSDWH 77
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 24.6 bits (51), Expect = 4.5
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Query: 28 LKMRGLTRDQIVRMKQRRRTLKNRGYAASCR--IKRIEQKDELENEKSQEWHDMELMQDE 85
LKM+ + +V KQR + + R +E++ +L+ E + + E E
Sbjct: 116 LKMQKASVSSMVNRKQRAAKEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSE 175
Query: 86 NNRIREEIEALRSKYDALKRFATMKSIPLPAELDIL 121
+ ++ EAL +Y+ L+ L AE+ L
Sbjct: 176 TEQYEKQKEALEEEYEELRNECLKHDPQLDAEIRTL 211
>SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 218
Score = 24.6 bits (51), Expect = 4.5
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 37 QIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEAL 96
+I M +R+R L+ Y + ++ + NE+S +M+ + R E +
Sbjct: 3 RITNMGKRKRFLEATPYES--KVLEQPKNSSNTNEESSSQDNMKASFGSSKRYDERQKKK 60
Query: 97 RSKYDALKR 105
RS+Y L+R
Sbjct: 61 RSEYRRLRR 69
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 24.6 bits (51), Expect = 4.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 67 ELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALK 104
E+++E E E++QD R REEIE + + L+
Sbjct: 28 EVDDENVNENKSQEMIQDIPARDREEIENITRTFVELQ 65
>SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 24.6 bits (51), Expect = 4.5
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 59 IKRIEQKDELENEKSQEWHDMELMQDENNR 88
IK+ E+ + + E+ + W +ME ++D ++
Sbjct: 350 IKKEEELEAAKEEEEEIWRNMEQLEDTEDK 379
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 24.6 bits (51), Expect = 4.5
Identities = 9/39 (23%), Positives = 22/39 (56%)
Query: 63 EQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYD 101
++K ELE + + + + + + N + EE+E L+ + +
Sbjct: 1366 KEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVE 1404
>SPAC31G5.19 |||ATPase with bromodomain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1190
Score = 24.2 bits (50), Expect = 5.9
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 23 DLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELM 82
D ++L + D++ +RRR +++ A+ RI + Q+DE + + +E H +
Sbjct: 13 DETQELSPVSDSSDEMPNNAKRRR--RSQSMIANKRIHQAFQEDEGDEDWEEEEHKPKAK 70
Query: 83 QDENNRIRE 91
+ N R E
Sbjct: 71 RRYNTRSNE 79
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 24.2 bits (50), Expect = 5.9
Identities = 8/28 (28%), Positives = 19/28 (67%)
Query: 59 IKRIEQKDELENEKSQEWHDMELMQDEN 86
+ R+EQ+ E+ ++ S++W +E + + N
Sbjct: 486 VDRVEQRVEMISDDSKKWRRVEEILESN 513
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 24.2 bits (50), Expect = 5.9
Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 11 ISDDELVSISVRDLNRQLKMR-GLTRDQIVRMKQRRRTLKNRGYAASCRIKRIEQKDELE 69
++ + +++ ++ R+ + R D KQ+ L+ S +K+I +ELE
Sbjct: 868 LTTERAIALDKEEILRRTQERLANIEDSFSETKQQNENLQRE----SASLKQIN--NELE 921
Query: 70 NEKSQEWHDMELMQDENNRIREEI 93
+E ++ +E + E N ++E++
Sbjct: 922 SELLEKTSKVETLLSEQNELKEKL 945
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 24.2 bits (50), Expect = 5.9
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 63 EQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDAL 103
E+KDELE E+ E ++ Q+E + +++E L D L
Sbjct: 134 EEKDELEEERIAE----DIAQNEVEQNIDDVEDLEEVNDTL 170
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 23.8 bits (49), Expect = 7.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 37 QIVRMKQRRRTLKNRGYAASCRIKRIEQK 65
QI +R+ +K RG A C + R+E +
Sbjct: 116 QISSAAKRKSFIKERGMLAKCFLARLEDE 144
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 23.8 bits (49), Expect = 7.8
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 42 KQRRRTLKNRGYAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSK 99
K+RR +NR A+ R K+ E ELE + + + +Q +++++E L+S+
Sbjct: 12 KRRRILERNRIAASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLSQLQQEAFRLKSQ 69
>SPAC688.06c |slx4||structure-specific endonuclease subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 23.8 bits (49), Expect = 7.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 81 LMQDENNRIREEIEALRSKYDALKRFATMKS 111
L D N R+ E+ + L S+Y +K A+ ++
Sbjct: 108 LEPDLNTRVAEDNDVLLSRYSKIKNSASCRN 138
>SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 405
Score = 23.8 bits (49), Expect = 7.8
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 53 YAASCRIKRIEQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKYDALKRFATMKSI 112
+ SC E+ ++ +QE D E + D R+R E K + + + + S
Sbjct: 182 HLVSCLASLAERYPGMQCLFAQELRDQETLVDFLERVRPYFEVDLIKMEEINKTSVASST 241
Query: 113 PLP 115
LP
Sbjct: 242 NLP 244
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 23.8 bits (49), Expect = 7.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 69 ENEKSQEWHDMELMQDENNRIREEI 93
ENE+S + D + ++EN R +EE+
Sbjct: 644 ENEESADEVDFQTEREENARKKEEL 668
>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 198
Score = 23.8 bits (49), Expect = 7.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 10 EISDDELVSISVRDLNRQLKMRGLTRDQIVRMKQRRRTLKNRGYA 54
EI+D++L L + G +RD I R+KQ+R K ++
Sbjct: 129 EIADNDLEPEVYDILYEEESKLGESRDLIRRLKQKRFETKKNNFS 173
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 23.8 bits (49), Expect = 7.8
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 60 KRIEQKDELENEKSQEWHDMELMQDEN-NRIREEIE 94
+R EQ+D+ EN+K Q+ D++ D N N I E+ E
Sbjct: 331 QRREQQDKGENKKRQD--DVDQATDNNTNTILEDDE 364
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 23.8 bits (49), Expect = 7.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 63 EQKDELENEKSQEWHDMELMQDENNRIREEIEALRSKY 100
E E E S + ++ + E+N+ REE++ L +KY
Sbjct: 48 ESSSEDEEINSFQINEEYAKRFEHNKKREELQKLEAKY 85
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 23.8 bits (49), Expect = 7.8
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 60 KRIEQKDELENEKSQEWHDMELMQDEN-NRIREEIE 94
+R EQ+D+ EN+K Q+ D++ D N N I E+ E
Sbjct: 331 QRREQQDKGENKKRQD--DVDQATDNNTNTILEDDE 364
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.132 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,276
Number of Sequences: 5004
Number of extensions: 19551
Number of successful extensions: 151
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 106
Number of HSP's gapped (non-prelim): 60
length of query: 122
length of database: 2,362,478
effective HSP length: 65
effective length of query: 57
effective length of database: 2,037,218
effective search space: 116121426
effective search space used: 116121426
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)
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