GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000157-TA|BGIBMGA000157-PA|IPR004827|Basic-leucine
zipper (bZIP) transcription factor, IPR008917|Eukaryotic transcription
factor, DNA-binding, IPR004826|Maf transcription factor
         (122 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   4.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   4.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    20   6.9  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 68  LENEKSQEWHDMEL 81
           L NE+ Q WHD+ +
Sbjct: 148 LVNEQGQTWHDLRV 161


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 7/26 (26%), Positives = 17/26 (65%)

Query: 66  DELENEKSQEWHDMELMQDENNRIRE 91
           + ++N      ++++++  E+NRIRE
Sbjct: 831 ESIQNRTFNGLNNLQILHLEDNRIRE 856


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 82  MQDENNRIR--EEIEALRSKYDALKRFAT 108
           M +E  ++R  EE+ ALR++  A  + AT
Sbjct: 44  MVEEKTQLRYLEELNALRTELGASTKLAT 72



 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query: 63  EQKDELENEKSQEWHDMELMQ 83
           E ++E EN+K  +   +++MQ
Sbjct: 319 ETEEEEENDKKLDLDSIDMMQ 339


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 6.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 57  CRIKRIEQKDELENEK 72
           C +KR E+K + E +K
Sbjct: 263 CAVKRKEEKAQKEKDK 278


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.132    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,470
Number of Sequences: 429
Number of extensions: 1347
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 122
length of database: 140,377
effective HSP length: 51
effective length of query: 71
effective length of database: 118,498
effective search space:  8413358
effective search space used:  8413358
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)