Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000156-TA|BGIBMGA000156-PA|undefined
(99 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70857-8|AAB09173.2| 256|Caenorhabditis elegans C.elegans homeo... 70 2e-13
U70857-9|AAB09174.1| 261|Caenorhabditis elegans C.elegans homeo... 70 3e-13
Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical pr... 64 2e-11
AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein. 64 2e-11
Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical pr... 26 5.1
AF036706-6|AAK39275.2| 481|Caenorhabditis elegans Glutamyl(e)/g... 26 5.1
Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z48717-5|CAA88610.1| 519|Caenorhabditis elegans Hypothetical pr... 25 9.0
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 25 9.0
AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical ... 25 9.0
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 25 9.0
>U70857-8|AAB09173.2| 256|Caenorhabditis elegans C.elegans homeobox
protein 34 protein.
Length = 256
Score = 70.1 bits (164), Expect = 2e-13
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 10 QAGNIDRLGRFLWSLPACERLHAHESVLKAKAMVAFHRGNFKELYRLLESHNFSAHNHAK 69
Q G ++L F+++LP C ++ ESVLKA+A+V F N+K LY+LLE FS HNH
Sbjct: 35 QTGRTEQLANFIYNLPQCYQVM--ESVLKAQALVYFTTQNWKMLYKLLECSKFSPHNHTV 92
Query: 70 LQSLWLKATKK 80
LQ+LWL A K
Sbjct: 93 LQNLWLDAHYK 103
>U70857-9|AAB09174.1| 261|Caenorhabditis elegans C.elegans
homeobox protein 33 protein.
Length = 261
Score = 69.7 bits (163), Expect = 3e-13
Identities = 27/62 (43%), Positives = 45/62 (72%)
Query: 16 RLGRFLWSLPACERLHAHESVLKAKAMVAFHRGNFKELYRLLESHNFSAHNHAKLQSLWL 75
+L +F+W++ + + ++ +LKA+A +AFH NFKELYR++ESH+F++ +H LQ WL
Sbjct: 38 KLSQFVWTVLERDEMRNNQYILKAQAFLAFHSNNFKELYRIIESHHFASEHHLPLQEWWL 97
Query: 76 KA 77
A
Sbjct: 98 NA 99
>Z77670-4|CAB01249.2| 439|Caenorhabditis elegans Hypothetical
protein W05E10.3 protein.
Length = 439
Score = 63.7 bits (148), Expect = 2e-11
Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 1 MIRPYQVLQQAGNIDRLGRFLWSLPA--CERLHAHESVLKAKAMVAFHRGNFKELYRLLE 58
+++ + L+ G++D L RF+ ++P + + +E+ L+A+A+V FH +F+ELY +LE
Sbjct: 73 IVKTCEQLETDGDVDGLFRFMCTIPPQKTQEVAGNEAFLRARALVCFHASHFRELYAILE 132
Query: 59 SHNFSAHNHAKLQSLWLKA 77
++ FS H KLQ +W +A
Sbjct: 133 NNKFSPKYHPKLQEMWHEA 151
>AF325178-1|AAG49583.1| 439|Caenorhabditis elegans CEH-32 protein.
Length = 439
Score = 63.7 bits (148), Expect = 2e-11
Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 1 MIRPYQVLQQAGNIDRLGRFLWSLPA--CERLHAHESVLKAKAMVAFHRGNFKELYRLLE 58
+++ + L+ G++D L RF+ ++P + + +E+ L+A+A+V FH +F+ELY +LE
Sbjct: 73 IVKTCEQLETDGDVDGLFRFMCTIPPQKTQEVAGNEAFLRARALVCFHASHFRELYAILE 132
Query: 59 SHNFSAHNHAKLQSLWLKA 77
++ FS H KLQ +W +A
Sbjct: 133 NNKFSPKYHPKLQEMWHEA 151
>Z73971-3|CAA98253.1| 265|Caenorhabditis elegans Hypothetical
protein C50H2.5 protein.
Length = 265
Score = 30.7 bits (66), Expect = 0.18
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 38 KAKAMVAFHRGNFKELYRLLESHNFSAHNHAKLQSLWLKATKKR 81
K +A++ F +GN + ++ + +HA LQ L+ KA K+R
Sbjct: 67 KTQAVLCFLKGNHFDSQEIIRRGFYDKRHHAFLQELFKKAEKRR 110
>Z80214-1|CAB02262.1| 500|Caenorhabditis elegans Hypothetical
protein C27D8.2 protein.
Length = 500
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 32 AHESVLKAKAMVAFHRGNFKELYRLLES 59
A ES+ K A+ FH+ F +LY++L S
Sbjct: 171 AIESIEKLVALPDFHKVPFHQLYQILSS 198
>AF036706-6|AAK39275.2| 481|Caenorhabditis elegans
Glutamyl(e)/glutaminyl(q) trnasynthetase protein 3
protein.
Length = 481
Score = 25.8 bits (54), Expect = 5.1
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 15 DRLGRFLWSLPACERLHAHESVLKAKAMVAFHRGNFKELY-RLLESHNFSAHNHAKLQSL 73
+ + +F SL L VL+ + +AF + +FKELY R+++ N ++ + +
Sbjct: 304 EMIEQFDLSLLGRRNLLLDSDVLQKYSRMAFQKSDFKELYPRIIDILNKKSNYSTSREDI 363
Query: 74 WLKATKKRKLQANF 87
T + + NF
Sbjct: 364 QKIVTFLKAKEENF 377
>Z81592-6|CAB04733.2| 431|Caenorhabditis elegans Hypothetical
protein T16G1.6 protein.
Length = 431
Score = 25.4 bits (53), Expect = 6.8
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 24 LPACERLHAHESVLKAKAMVAFHRGNFKELYRLLESHNFSAHNHAKLQSLWLKATKKRK 82
L C LH H V K K N +EL+ + E N + H H + + ++ A K K
Sbjct: 78 LKICSSLHVHGIVDKMKESNQSINENEEELWAMFE--NEAQHLHNREVNFYVLAEKWNK 134
>Z48717-5|CAA88610.1| 519|Caenorhabditis elegans Hypothetical
protein T10B9.8 protein.
Length = 519
Score = 25.0 bits (52), Expect = 9.0
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 37 LKAKAMVAFHRGNFKELYRLLESHNFSAHNHAKLQSLWLKATKKRKLQANFSLDL 91
L+A + F + ++LY+ +E H + QS K K F+LD+
Sbjct: 129 LRAISSPTFSNSSLRKLYQTVEDSALELLRHIEKQSAGGKQIDMLKFYQEFTLDV 183
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 25.0 bits (52), Expect = 9.0
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 14 IDRLGRFLWSLPACERLHAHESVLKAKAMVAFHRGNFKELYRLLESHN 61
+ +L ++W PA + L+A + L MVA R + E RL S+N
Sbjct: 617 LSQLPEYIWLCPALKELNASYNRLSTLPMVA--RASRGERPRLNNSNN 662
>AF039710-9|AAB96685.2| 172|Caenorhabditis elegans Hypothetical
protein C46E10.8 protein.
Length = 172
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 17 LGRFLWSLPACERLHAHESVLKA 39
LG+F++ AC R++A LK+
Sbjct: 24 LGKFVYQCKACSRIYASRKSLKS 46
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 25.0 bits (52), Expect = 9.0
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 14 IDRLGRFLWSLPACERLHAHESVLKAKAMVAFHRGNFKELYRLLESHN 61
+ +L ++W PA + L+A + L MVA R + E RL S+N
Sbjct: 615 LSQLPEYIWLCPALKELNASYNRLSTLPMVA--RASRGERPRLNNSNN 660
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.134 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,153,909
Number of Sequences: 27539
Number of extensions: 66265
Number of successful extensions: 180
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 171
Number of HSP's gapped (non-prelim): 12
length of query: 99
length of database: 12,573,161
effective HSP length: 70
effective length of query: 29
effective length of database: 10,645,431
effective search space: 308717499
effective search space used: 308717499
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 52 (25.0 bits)
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