Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000155-TA|BGIBMGA000155-PA|IPR003521|Nucleotide-
sensitive chloride conductance regulator
         (201 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.9  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 5   SSNFAEPADGVLL----QSPSTKLLINDQELGTATLYITENNVIW 45
           S+  AE    VL+     S STK+L  D +   +   I    V+W
Sbjct: 187 STALAESFQNVLVPTASNSKSTKVLFKDVDRNCSAYIIAHYRVLW 231


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 5   SSNFAEPADGVLL----QSPSTKLLINDQELGTATLYITENNVIW 45
           S+  AE    VL+     S STK+L  D +   +   I    V+W
Sbjct: 187 STALAESFQNVLVPTASNSKSTKVLFKDVDRNCSAYIIAHYRVLW 231


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 5   SSNFAEPADGVLL----QSPSTKLLINDQELGTATLYITENNVIW 45
           S+  AE    VL+     S STK+L  D +   +   I    V+W
Sbjct: 187 STALAESFQNVLVPTASNSKSTKVLFKDVDRNCSAYIIAHYRVLW 231


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.133    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,422
Number of Sequences: 317
Number of extensions: 1335
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 201
length of database: 114,650
effective HSP length: 54
effective length of query: 147
effective length of database: 97,532
effective search space: 14337204
effective search space used: 14337204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)